Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv05449 Davidia involucrata HOM05D000258 ORTHO05D000153 5.0e-53 210.7 96 100.0
Dinv42194 Davidia involucrata HOM05D000258 ORTHO05D000153 9.6e-12 73.6 49 73.5
SalBow6G2091 Salvia bowleyana HOM05D000258 ORTHO05D000153 4.7e-11 71.2 49 69.4
SGA_v2.0_scaffold225G43071 Striga asiatica HOM05D000258 ORTHO05D000153 4.7e-11 71.2 49 69.4
Oeu010404.2 Olea europaea HOM05D000258 ORTHO05D000153 6.2e-11 70.9 49 69.4
Hma1.2p1_0796F.1_g219200 Hydrangea macrophylla HOM05D000258 ORTHO05D000153 8.1e-11 70.5 49 67.3
TAR381G0267 Trochodendron aralioides HOM05D000258 ORTHO05D000153 1.4e-10 69.7 49 65.3
TAR628G0953 Trochodendron aralioides HOM05D000258 ORTHO05D000153 1.4e-10 69.7 49 65.3
Nitab4.5_0001539g0030 Nicotiana tabacum HOM05D000258 ORTHO05D000153 1.8e-10 69.3 49 67.3
GSVIVG01003150001 Vitis vinifera HOM05D000258 ORTHO05D000153 1.8e-10 69.3 49 67.3
ClCG05G010310 Citrullus lanatus HOM05D000258 ORTHO05D000153 2.4e-10 68.9 49 65.3
Gohir.A03G186100 Gossypium hirsutum HOM05D000258 ORTHO05D000153 2.4e-10 68.9 49 65.3
Peaxi162Scf00016g02329 Petunia axillaris HOM05D000258 ORTHO05D000153 2.4e-10 68.9 49 67.3
MSTRG.16712 Avicennia marina HOM05D000258 ORTHO05D000153 3.1e-10 68.6 49 63.3
Gorai.005G234800 Gossypium raimondii HOM05D000258 ORTHO05D000153 3.1e-10 68.6 49 65.3
Psat6g219040 Pisum sativum HOM05D000258 ORTHO05D000153 3.1e-10 68.6 49 65.3
Sed0001486 Sechium edule HOM05D000258 ORTHO05D000153 3.1e-10 68.6 49 65.3
CiPaw.05G011700 Carya illinoinensis HOM05D000258 ORTHO05D000153 4.0e-10 68.2 49 65.3
DCAR_021986 Daucus carota HOM05D000258 ORTHO05D000153 4.0e-10 68.2 49 65.3
Peaxi162Scf00152g00245 Petunia axillaris HOM05D000258 ORTHO05D000153 4.0e-10 68.2 49 65.3
Sed0016864 Sechium edule HOM05D000258 ORTHO05D000153 4.0e-10 68.2 49 65.3
VMungo0720G1470 Vigna mungo HOM05D000258 ORTHO05D000153 4.0e-10 68.2 49 65.3
ECA240G3165 Erigeron canadensis HOM05D000258 ORTHO05D000153 5.2e-10 67.8 48 66.7
Nitab4.5_0002815g0020 Nicotiana tabacum HOM05D000258 ORTHO05D000153 5.2e-10 67.8 49 63.3
MELO3C019548.2 Cucumis melo HOM05D000258 ORTHO05D000153 6.8e-10 67.4 49 63.3
CsaV3_3G018190 Cucumis sativus L. HOM05D000258 ORTHO05D000153 6.8e-10 67.4 49 63.3
Gohir.D02G206966 Gossypium hirsutum HOM05D000258 ORTHO05D000153 6.8e-10 67.4 40 72.5
Potri.009G095800 Populus trichocarpa HOM05D000258 ORTHO05D000153 6.8e-10 67.4 49 63.3
QL11p033663 Quercus lobata HOM05D000258 ORTHO05D000153 6.8e-10 67.4 49 63.3
Solyc01g107590.3 Solanum lycopersicum HOM05D000258 ORTHO05D000153 6.8e-10 67.4 42 71.4
Sopen01g049780 Solanum pennellii HOM05D000258 ORTHO05D000153 6.8e-10 67.4 42 71.4
PGSC0003DMG401025767 Solanum tuberosum HOM05D000258 ORTHO05D000153 6.8e-10 67.4 42 71.4
GSVIVG01003153001 Vitis vinifera HOM05D000258 ORTHO05D000153 6.8e-10 67.4 49 65.3
Actinidia00408 Actinidia chinensis HOM05D000258 ORTHO05D000153 8.9e-10 67.0 36 83.3
Lj9C322T8 Lonicera japonica HOM05D000258 ORTHO05D000153 8.9e-10 67.0 49 65.3
Manes.10G076700 Manihot esculenta HOM05D000258 ORTHO05D000153 8.9e-10 67.0 49 61.2
Oeu018585.1 Olea europaea HOM05D000258 ORTHO05D000153 8.9e-10 67.0 49 65.3
AL7G17080 Arabidopsis lyrata HOM05D000258 ORTHO05D000153 1.2e-09 66.6 49 65.3
Cpa.g.sc106.91 Carica papaya HOM05D000258 ORTHO05D000153 1.2e-09 66.6 49 65.3
CiPaw.06G169200 Carya illinoinensis HOM05D000258 ORTHO05D000153 1.2e-09 66.6 49 63.3
QL11p033622 Quercus lobata HOM05D000258 ORTHO05D000153 1.2e-09 66.6 49 65.3
Sed0004095 Sechium edule HOM05D000258 ORTHO05D000153 1.2e-09 66.6 71 53.5
AT4G34230 Arabidopsis thaliana HOM05D000258 ORTHO05D000153 1.5e-09 66.2 49 65.3
Cfa004577 Carpinus fangiana HOM05D000258 ORTHO05D000153 1.5e-09 66.2 49 65.3
Ciclev10028651m.g Citrus clementina HOM05D000258 ORTHO05D000153 1.5e-09 66.2 49 65.3
Glyma.10G262400 Glycine max HOM05D000258 ORTHO05D000153 1.5e-09 66.2 49 63.3
Nn1g04696 Nelumbo nucifera HOM05D000258 ORTHO05D000153 1.5e-09 66.2 49 61.2
CAN.G1231.5 Capsicum annuum HOM05D000258 ORTHO05D000153 2.0e-09 65.9 42 69.0
Ca_11074_v3 Cicer arietinum L. HOM05D000258 ORTHO05D000153 2.0e-09 65.9 50 62.0
Glyma.20G128600 Glycine max HOM05D000258 ORTHO05D000153 2.0e-09 65.9 49 61.2
Lsat_1_v5_gn_9_111281 Lactuca sativa HOM05D000258 ORTHO05D000153 2.0e-09 65.9 49 61.2
THA.LOC104807239 Tarenaya hassleriana HOM05D000258 ORTHO05D000153 2.0e-09 65.9 48 66.7
TWI31G0515 Tripterygium wilfordii HOM05D000258 ORTHO05D000153 2.0e-09 65.9 49 65.3
ClCG02G006330 Citrullus lanatus HOM05D000258 ORTHO05D000153 2.6e-09 65.5 49 63.3
Cc02_g19270 Coffea canephora HOM05D000258 ORTHO05D000153 2.6e-09 65.5 49 63.3
Duzib132G0365 Durio zibethinus HOM05D000258 ORTHO05D000153 2.6e-09 65.5 47 66.0
Migut.B00391 Erythranthe guttata HOM05D000258 ORTHO05D000153 2.6e-09 65.5 48 64.6
HanXRQChr17g0570601 Helianthus annuus HOM05D000258 ORTHO05D000153 2.6e-09 65.5 49 61.2
Lj5g0027976 Lotus japonicus HOM05D000258 ORTHO05D000153 2.6e-09 65.5 49 63.3
Sabra09G0073600 Salix brachista HOM05D000258 ORTHO05D000153 2.6e-09 65.5 49 59.2
Actinidia17482 Actinidia chinensis HOM05D000258 ORTHO05D000153 3.4e-09 65.1 49 61.2
arahy.Tifrunner.gnm1.ann1.BJ0NT8 Arachis hypogaea HOM05D000258 ORTHO05D000153 3.4e-09 65.1 49 63.3
arahy.Tifrunner.gnm1.ann1.WY6NTH Arachis hypogaea HOM05D000258 ORTHO05D000153 3.4e-09 65.1 49 63.3
BcaNung04983 Brassica carinata HOM05D000258 ORTHO05D000153 3.4e-09 65.1 49 63.3
C01p04580 Brassica napus HOM05D000258 ORTHO05D000153 3.4e-09 65.1 49 63.3
BolC1t00442H Brassica oleracea HOM05D000258 ORTHO05D000153 3.4e-09 65.1 49 63.3
Medtr1g107425 Medicago truncatula HOM05D000258 ORTHO05D000153 3.4e-09 65.1 48 62.5
Nitab4.5_0005392g0080 Nicotiana tabacum HOM05D000258 ORTHO05D000153 3.4e-09 65.1 49 61.2
Rhsim11G0160000 Rhododendron simsii HOM05D000258 ORTHO05D000153 3.4e-09 65.1 49 61.2
Sabra16G0188300 Salix brachista HOM05D000258 ORTHO05D000153 3.4e-09 65.1 49 61.2
vmacro02002 Vaccinium macrocarpon HOM05D000258 ORTHO05D000153 3.4e-09 65.1 49 63.3
A01p04200 Brassica napus HOM05D000258 ORTHO05D000153 4.4e-09 64.7 49 63.3
BraA01t00409Z Brassica rapa HOM05D000258 ORTHO05D000153 4.4e-09 64.7 49 63.3
CSS0014091 Camellia sinensis var. sinensis HOM05D000258 ORTHO05D000153 4.4e-09 64.7 49 63.3
CSS0030089 Camellia sinensis var. sinensis HOM05D000258 ORTHO05D000153 4.4e-09 64.7 49 63.3
Carub.0007s0614 Capsella rubella HOM05D000258 ORTHO05D000153 4.4e-09 64.7 49 63.3
Duzib248G1288 Durio zibethinus HOM05D000258 ORTHO05D000153 4.4e-09 64.7 47 66.0
Eucgr.G01350 Eucalyptus grandis HOM05D000258 ORTHO05D000153 4.4e-09 64.7 49 61.2
Thhalv10025563m.g Eutrema salsugineum HOM05D000258 ORTHO05D000153 4.4e-09 64.7 49 63.3
Sp7g32010 Schrenkiella parvula HOM05D000258 ORTHO05D000153 4.4e-09 64.7 49 63.3
Atru.chr5.2537 Acer truncatum HOM05D000258 ORTHO05D000153 5.8e-09 64.3 49 63.3
BcaNung05136 Brassica carinata HOM05D000258 ORTHO05D000153 5.8e-09 64.3 49 63.3
A03p62750 Brassica napus HOM05D000258 ORTHO05D000153 5.8e-09 64.3 49 63.3
C07p60330 Brassica napus HOM05D000258 ORTHO05D000153 5.8e-09 64.3 49 63.3
BolC7t46471H Brassica oleracea HOM05D000258 ORTHO05D000153 5.8e-09 64.3 49 63.3
BraA03t15352Z Brassica rapa HOM05D000258 ORTHO05D000153 5.8e-09 64.3 49 63.3
CARHR242560 Cardamine hirsuta HOM05D000258 ORTHO05D000153 5.8e-09 64.3 49 63.3
HanXRQChr16g0509211 Helianthus annuus HOM05D000258 ORTHO05D000153 5.8e-09 64.3 48 62.5
Nn5g30425 Nelumbo nucifera HOM05D000258 ORTHO05D000153 5.8e-09 64.3 49 61.2
Phvul.007G039800 Phaseolus vulgaris HOM05D000258 ORTHO05D000153 5.8e-09 64.3 49 61.2
Hund06316 Selenicereus undatus HOM05D000258 ORTHO05D000153 5.8e-09 64.3 49 63.3
TWI79G1244 Tripterygium wilfordii HOM05D000258 ORTHO05D000153 5.8e-09 64.3 49 63.3
ECA236G1340 Erigeron canadensis HOM05D000258 ORTHO05D000153 7.6e-09 63.9 48 62.5
Gohir.A12G021900 Gossypium hirsutum HOM05D000258 ORTHO05D000153 7.6e-09 63.9 47 63.8
MD05G1089900 Malus domestica HOM05D000258 ORTHO05D000153 7.6e-09 63.9 47 63.8
MD10G1097500 Malus domestica HOM05D000258 ORTHO05D000153 7.6e-09 63.9 47 63.8
Haze_10173 Corylus avellana HOM05D000258 ORTHO05D000153 9.9e-09 63.5 49 61.2
MELO3C018492.2 Cucumis melo HOM05D000258 ORTHO05D000153 9.9e-09 63.5 49 63.3
CsaV3_7G008140 Cucumis sativus L. HOM05D000258 ORTHO05D000153 9.9e-09 63.5 49 63.3
THA.LOC104798790 Tarenaya hassleriana HOM05D000258 ORTHO05D000153 9.9e-09 63.5 49 61.2
TWI79G1472 Tripterygium wilfordii HOM05D000258 ORTHO05D000153 9.9e-09 63.5 49 63.3
Actinidia03812 Actinidia chinensis HOM05D000258 ORTHO05D000153 1.3e-08 63.2 83 44.6
AL3G32860 Arabidopsis lyrata HOM05D000258 ORTHO05D000153 1.3e-08 63.2 47 66.0
AT3G19450 Arabidopsis thaliana HOM05D000258 ORTHO05D000153 1.3e-08 63.2 47 66.0
Carub.0003s1926 Capsella rubella HOM05D000258 ORTHO05D000153 1.3e-08 63.2 47 66.0
CARHR094880 Cardamine hirsuta HOM05D000258 ORTHO05D000153 1.3e-08 63.2 47 66.0
DCAR_001644 Daucus carota HOM05D000258 ORTHO05D000153 1.3e-08 63.2 48 64.6
MD10G1097200 Malus domestica HOM05D000258 ORTHO05D000153 1.3e-08 63.2 47 63.8
Oeu017463.1 Olea europaea HOM05D000258 ORTHO05D000153 1.3e-08 63.2 49 61.2
Prupe.8G135300 Prunus persica HOM05D000258 ORTHO05D000153 1.3e-08 63.2 47 66.0
Sc08g0001380 Simmondsia chinensis HOM05D000258 ORTHO05D000153 1.3e-08 63.2 42 69.0
THA.LOC104804389 Tarenaya hassleriana HOM05D000258 ORTHO05D000153 1.3e-08 63.2 49 61.2
Aa31LG2G16740 Aethionema arabicum HOM05D000258 ORTHO05D000153 1.7e-08 62.8 49 61.2
CSS0004788 Camellia sinensis var. sinensis HOM05D000258 ORTHO05D000153 2.2e-08 62.4 49 59.2
CSS0036540 Camellia sinensis var. sinensis HOM05D000258 ORTHO05D000153 2.2e-08 62.4 49 59.2
Lsat_1_v5_gn_4_66380 Lactuca sativa HOM05D000258 ORTHO05D000153 2.2e-08 62.4 47 61.7
Manes.07G069780 Manihot esculenta HOM05D000258 ORTHO05D000153 2.2e-08 62.4 49 59.2
Thecc.02G108100 Theobroma cacao HOM05D000258 ORTHO05D000153 2.2e-08 62.4 47 66.0
TPR.G30549 Trifolium pratense HOM05D000258 ORTHO05D000153 2.2e-08 62.4 49 59.2
Zm00001eb234730 Zea mays HOM05D000258 ORTHO05D000153 2.2e-08 62.4 47 63.8
EL10Ac9g22273 Beta vulgaris HOM05D000258 ORTHO05D000153 2.9e-08 62.0 49 57.1
Gohir.D12G022400 Gossypium hirsutum HOM05D000258 ORTHO05D000153 2.9e-08 62.0 47 61.7
Gorai.008G022800 Gossypium raimondii HOM05D000258 ORTHO05D000153 2.9e-08 62.0 47 61.7
Lj5A214T64 Lonicera japonica HOM05D000258 ORTHO05D000153 2.9e-08 62.0 48 62.5
PGR042G1907 Punica granatum HOM05D000258 ORTHO05D000153 2.9e-08 62.0 48 60.4
Aa31LG8G6200 Aethionema arabicum HOM05D000258 ORTHO05D000153 3.8e-08 61.6 37 73.0
FAN15G1971 Fragaria x ananassa HOM05D000258 ORTHO05D000153 3.8e-08 61.6 47 59.6
FAN15G2900 Fragaria x ananassa HOM05D000258 ORTHO05D000153 3.8e-08 61.6 47 59.6
FAN20G2777 Fragaria x ananassa HOM05D000258 ORTHO05D000153 3.8e-08 61.6 47 59.6
Lalb_Chr21g0308331 Lupinus albus HOM05D000258 ORTHO05D000153 3.8e-08 61.6 48 58.3
MD10G1097100 Malus domestica HOM05D000258 ORTHO05D000153 3.8e-08 61.6 47 61.7
Atru.chr5.2542 Acer truncatum HOM05D000258 ORTHO05D000153 4.9e-08 61.2 49 61.2
Atru.chr5.2567 Acer truncatum HOM05D000258 ORTHO05D000153 4.9e-08 61.2 49 61.2
BcaB06g26005 Brassica carinata HOM05D000258 ORTHO05D000153 4.9e-08 61.2 47 63.8
BcaC05g28474 Brassica carinata HOM05D000258 ORTHO05D000153 4.9e-08 61.2 47 63.8
A05p30150 Brassica napus HOM05D000258 ORTHO05D000153 4.9e-08 61.2 47 63.8
C05p45580 Brassica napus HOM05D000258 ORTHO05D000153 4.9e-08 61.2 47 63.8
BolC5t33283H Brassica oleracea HOM05D000258 ORTHO05D000153 4.9e-08 61.2 47 63.8
BraA05t21855Z Brassica rapa HOM05D000258 ORTHO05D000153 4.9e-08 61.2 47 63.8
FvH4_2g05132 Fragaria vesca HOM05D000258 ORTHO05D000153 4.9e-08 61.2 47 59.6
Os02g0187800 Oryza sativa ssp. japonica HOM05D000258 ORTHO05D000153 4.9e-08 61.2 47 61.7
PGR142G2902 Punica granatum HOM05D000258 ORTHO05D000153 4.9e-08 61.2 47 63.8
CANSAT25G0739 Cannabis sativa HOM05D000258 ORTHO05D000153 6.4e-08 60.8 49 59.2
Sp3g17510 Schrenkiella parvula HOM05D000258 ORTHO05D000153 8.4e-08 60.5 47 63.8
Thhalv10020991m.g Eutrema salsugineum HOM05D000258 ORTHO05D000153 1.1e-07 60.1 47 61.7
CANSAT01G3074 Cannabis sativa HOM05D000258 ORTHO05D000153 1.4e-07 59.7 49 57.1
CANSAT25G1588 Cannabis sativa HOM05D000258 ORTHO05D000153 1.4e-07 59.7 49 57.1
AUR62010312 Chenopodium quinoa HOM05D000258 ORTHO05D000153 1.4e-07 59.7 49 57.1
RcHm_v2.0_Chr6g0255061 Rosa chinensis HOM05D000258 ORTHO05D000153 1.4e-07 59.7 47 57.4
Sed0016235 Sechium edule HOM05D000258 ORTHO05D000153 1.4e-07 59.7 49 57.1
unitig_0.g873 Utricularia gibba HOM05D000258 ORTHO05D000153 1.4e-07 59.7 38 68.4
AUR62039075 Chenopodium quinoa HOM05D000258 ORTHO05D000153 1.9e-07 59.3 49 55.1
COL.COLO4_32593 Corchorus olitorius HOM05D000258 ORTHO05D000153 1.9e-07 59.3 35 77.1
HPP92_011622 Vanilla planifolia HOM05D000258 ORTHO05D000153 1.9e-07 59.3 47 61.7
PSO541G5125 Papaver somniferum HOM05D000258 ORTHO05D000153 2.4e-07 58.9 53 58.5
HPP92_011623 Vanilla planifolia HOM05D000258 ORTHO05D000153 2.4e-07 58.9 47 61.7
CDE07G1732 Ceratophyllum demersum HOM05D000258 ORTHO05D000153 3.2e-07 58.5 47 61.7
RcHm_v2.0_Chr6g0255071 Rosa chinensis HOM05D000258 ORTHO05D000153 3.2e-07 58.5 47 59.6
Aqoxy6G02860 Aquilegia oxysepala HOM05D000258 ORTHO05D000153 4.2e-07 58.2 49 55.1
ATR0589G021 Amborella trichopoda HOM05D000258 ORTHO05D000153 5.4e-07 57.8 49 55.1
FvH4_2g05133 Fragaria vesca HOM05D000258 ORTHO05D000153 5.4e-07 57.8 47 57.4
FAN24G1531 Fragaria x ananassa HOM05D000258 ORTHO05D000153 5.4e-07 57.8 47 57.4
PSO675G1944 Papaver somniferum HOM05D000258 ORTHO05D000153 5.4e-07 57.8 53 56.6
Prupe.8G135100 Prunus persica HOM05D000258 ORTHO05D000153 1.6e-06 56.2 47 59.6
Atru.chr5.2538 Acer truncatum HOM05D000258 ORTHO05D000153 2.7e-06 55.5 46 56.5
FAN27G1787 Fragaria x ananassa HOM05D000258 ORTHO05D000153 2.7e-06 55.5 47 57.4
COL.COLO4_11707 Corchorus olitorius HOM05D000258 ORTHO05D000153 3.5e-06 55.1 48 54.2
Gohir.A11G207500 Gossypium hirsutum HOM05D000258 ORTHO05D000153 4.6e-06 54.7 48 52.1
Gohir.D11G215600 Gossypium hirsutum HOM05D000258 ORTHO05D000153 4.6e-06 54.7 48 52.1
Gohir.D11G297200 Gossypium hirsutum HOM05D000258 ORTHO05D000153 4.6e-06 54.7 48 52.1
Gorai.007G231800 Gossypium raimondii HOM05D000258 ORTHO05D000153 4.6e-06 54.7 48 52.1
Manes.13G117800 Manihot esculenta HOM05D000258 ORTHO05D000153 4.6e-06 54.7 51 51.0
SMO164G0002 Selaginella moellendorffii HOM05D000258 ORTHO05D000153 4.6e-06 54.7 51 47.1
Zm00001eb071040 Zea mays HOM05D000258 ORTHO05D000153 4.6e-06 54.7 48 47.9
COL.COLO4_11710 Corchorus olitorius HOM05D000258 ORTHO05D000153 6.0e-06 54.3 48 52.1
Duzib147G0582 Durio zibethinus HOM05D000258 ORTHO05D000153 6.0e-06 54.3 48 52.1
Gorai.007G321900 Gossypium raimondii HOM05D000258 ORTHO05D000153 6.0e-06 54.3 48 52.1
Oeu013259.1 Olea europaea HOM05D000258 ORTHO05D000153 6.0e-06 54.3 50 56.0
SEGI_05466 Sequoiadendron giganteum HOM05D000258 ORTHO05D000153 6.0e-06 54.3 53 50.9
SMO118G0250 Selaginella moellendorffii HOM05D000258 ORTHO05D000153 7.8e-06 53.9 43 51.2
Thecc.01G086500 Theobroma cacao HOM05D000258 ORTHO05D000153 7.8e-06 53.9 48 52.1


User provided reference genes

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