Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv05447 Davidia involucrata HOM05D006996 ORTHO05D008961 3.7e-47 191.0 87 100.0
Dinv39702 Davidia involucrata HOM05D006996 ORTHO05D008961 1.2e-45 186.0 87 97.7
GSVIVG01012649001 Vitis vinifera HOM05D006996 ORTHO05D008961 3.9e-44 181.0 87 93.1
Ciclev10017328m.g Citrus clementina HOM05D006996 ORTHO05D008961 3.3e-43 177.9 85 95.3
CSS0007447 Camellia sinensis var. sinensis HOM05D006996 ORTHO05D008961 4.3e-43 177.6 86 91.9
PGR042G2836 Punica granatum HOM05D006996 ORTHO05D008961 4.3e-43 177.6 85 94.1
Cfa014416 Carpinus fangiana HOM05D006996 ORTHO05D008961 9.5e-43 176.4 85 94.1
TWI18G0629 Tripterygium wilfordii HOM05D006996 ORTHO05D008961 9.5e-43 176.4 85 91.8
CiPaw.03G161100 Carya illinoinensis HOM05D006996 ORTHO05D008961 2.1e-42 175.3 85 91.8
Gohir.A02G139400 Gossypium hirsutum HOM05D006996 ORTHO05D008961 2.8e-42 174.9 85 92.9
Gohir.D03G050100 Gossypium hirsutum HOM05D006996 ORTHO05D008961 2.8e-42 174.9 85 92.9
Gorai.003G051600 Gossypium raimondii HOM05D006996 ORTHO05D008961 2.8e-42 174.9 85 92.9
CSS0016840 Camellia sinensis var. sinensis HOM05D006996 ORTHO05D008961 3.6e-42 174.5 85 90.6
Eucgr.A01713 Eucalyptus grandis HOM05D006996 ORTHO05D008961 3.6e-42 174.5 85 90.6
Cc05_g04850 Coffea canephora HOM05D006996 ORTHO05D008961 6.1e-42 173.7 87 88.5
CANSAT64G1676 Cannabis sativa HOM05D006996 ORTHO05D008961 8.0e-42 173.3 85 90.6
FvH4_6g43320 Fragaria vesca HOM05D006996 ORTHO05D008961 1.0e-41 172.9 85 92.9
FAN14G3455 Fragaria x ananassa HOM05D006996 ORTHO05D008961 1.0e-41 172.9 85 92.9
Hma1.2p1_0957F.1_g241430 Hydrangea macrophylla HOM05D006996 ORTHO05D008961 1.0e-41 172.9 87 89.7
MD09G1069700 Malus domestica HOM05D006996 ORTHO05D008961 1.0e-41 172.9 85 91.8
MD17G1095900 Malus domestica HOM05D006996 ORTHO05D008961 1.0e-41 172.9 85 91.8
Prupe.3G218000 Prunus persica HOM05D006996 ORTHO05D008961 2.3e-41 171.8 85 90.6
FAN05G4357 Fragaria x ananassa HOM05D006996 ORTHO05D008961 3.1e-41 171.4 85 91.8
Peaxi162Scf00007g00930 Petunia axillaris HOM05D006996 ORTHO05D008961 6.8e-41 170.2 87 87.4
RcHm_v2.0_Chr2g0159651 Rosa chinensis HOM05D006996 ORTHO05D008961 6.8e-41 170.2 85 90.6
Oeu027249.1 Olea europaea HOM05D006996 ORTHO05D008961 8.9e-41 169.9 87 87.4
CDE05G0144 Ceratophyllum demersum HOM05D006996 ORTHO05D008961 1.5e-40 169.1 87 88.5
FAN02G2509 Fragaria x ananassa HOM05D006996 ORTHO05D008961 1.5e-40 169.1 85 91.8
QL08p033312 Quercus lobata HOM05D006996 ORTHO05D008961 2.0e-40 168.7 84 89.3
Thecc.05G208500 Theobroma cacao HOM05D006996 ORTHO05D008961 5.8e-40 167.2 79 93.7
Nitab4.5_0002137g0190 Nicotiana tabacum HOM05D006996 ORTHO05D008961 7.5e-40 166.8 87 85.1
Solyc07g052420.3 Solanum lycopersicum HOM05D006996 ORTHO05D008961 7.5e-40 166.8 83 88.0
MSTRG.6557 Avicennia marina HOM05D006996 ORTHO05D008961 9.8e-40 166.4 87 87.4
THA.LOC104800987 Tarenaya hassleriana HOM05D006996 ORTHO05D008961 9.8e-40 166.4 87 87.4
CDE11G0800 Ceratophyllum demersum HOM05D006996 ORTHO05D008961 1.3e-39 166.0 87 87.4
PGSC0003DMG400025488 Solanum tuberosum HOM05D006996 ORTHO05D008961 1.3e-39 166.0 83 86.7
Duzib128G0982 Durio zibethinus HOM05D006996 ORTHO05D008961 1.7e-39 165.6 84 86.9
Manes.13G070800 Manihot esculenta HOM05D006996 ORTHO05D008961 1.7e-39 165.6 84 86.9
Ah.11g047700 Amaranthus hybridus HOM05D006996 ORTHO05D008961 2.9e-39 164.9 83 88.0
Hund01114 Selenicereus undatus HOM05D006996 ORTHO05D008961 2.9e-39 164.9 87 86.2
Sopen07g026050 Solanum pennellii HOM05D006996 ORTHO05D008961 2.9e-39 164.9 83 85.5
Actinidia30517 Actinidia chinensis HOM05D006996 ORTHO05D008961 4.9e-39 164.1 85 89.4
HanXRQChr11g0350381 Helianthus annuus HOM05D006996 ORTHO05D008961 4.9e-39 164.1 87 85.1
HPP92_011134 Vanilla planifolia HOM05D006996 ORTHO05D008961 4.9e-39 164.1 88 85.2
Sed0014620 Sechium edule HOM05D006996 ORTHO05D008961 6.4e-39 163.7 84 88.1
ClCG02G001860 Citrullus lanatus HOM05D006996 ORTHO05D008961 8.3e-39 163.3 83 90.4
CsaV3_7G003680 Cucumis sativus L. HOM05D006996 ORTHO05D008961 8.3e-39 163.3 84 88.1
Lj1A759T40 Lonicera japonica HOM05D006996 ORTHO05D008961 1.4e-38 162.5 84 88.1
Lj1A760T24 Lonicera japonica HOM05D006996 ORTHO05D008961 1.4e-38 162.5 84 88.1
Lsat_1_v5_gn_5_163860 Lactuca sativa HOM05D006996 ORTHO05D008961 1.9e-38 162.2 87 83.9
Potri.018G093501 Populus trichocarpa HOM05D006996 ORTHO05D008961 1.9e-38 162.2 82 86.6
MELO3C018811.2 Cucumis melo HOM05D006996 ORTHO05D008961 2.4e-38 161.8 81 90.1
Nitab4.5_0007092g0010 Nicotiana tabacum HOM05D006996 ORTHO05D008961 2.4e-38 161.8 87 85.1
EL10Ac5g11141 Beta vulgaris HOM05D006996 ORTHO05D008961 3.2e-38 161.4 83 85.5
vmacro09127 Vaccinium macrocarpon HOM05D006996 ORTHO05D008961 4.1e-38 161.0 86 83.7
Zm00001eb100890 Zea mays HOM05D006996 ORTHO05D008961 4.1e-38 161.0 84 86.9
Zm00001eb209620 Zea mays HOM05D006996 ORTHO05D008961 4.1e-38 161.0 84 86.9
Sabra18G0080400 Salix brachista HOM05D006996 ORTHO05D008961 5.4e-38 160.6 82 85.4
Glyma.12G194300 Glycine max HOM05D006996 ORTHO05D008961 2.0e-37 158.7 83 84.3
Aa31LG1G19540 Aethionema arabicum HOM05D006996 ORTHO05D008961 3.5e-37 157.9 85 84.7
TPR.G4182 Trifolium pratense HOM05D006996 ORTHO05D008961 3.5e-37 157.9 87 85.1
CAN.G846.6 Capsicum annuum HOM05D006996 ORTHO05D008961 4.6e-37 157.5 83 81.9
Medtr2g088460 Medicago truncatula HOM05D006996 ORTHO05D008961 4.6e-37 157.5 80 87.5
ECA248G0348 Erigeron canadensis HOM05D006996 ORTHO05D008961 1.0e-36 156.4 84 81.0
AT1G05205 Arabidopsis thaliana HOM05D006996 ORTHO05D008961 1.3e-36 156.0 84 85.7
Carub.0001s0448 Capsella rubella HOM05D006996 ORTHO05D008961 1.3e-36 156.0 85 84.7
Nn2g12174 Nelumbo nucifera HOM05D006996 ORTHO05D008961 1.3e-36 156.0 111 69.4
arahy.Tifrunner.gnm1.ann1.7T5QAW Arachis hypogaea HOM05D006996 ORTHO05D008961 1.7e-36 155.6 81 84.0
arahy.Tifrunner.gnm1.ann1.BHY6M8 Arachis hypogaea HOM05D006996 ORTHO05D008961 1.7e-36 155.6 81 84.0
arahy.Tifrunner.gnm1.ann1.MSE8LU Arachis hypogaea HOM05D006996 ORTHO05D008961 1.7e-36 155.6 81 84.0
arahy.Tifrunner.gnm1.ann1.QWF8TS Arachis hypogaea HOM05D006996 ORTHO05D008961 1.7e-36 155.6 81 84.0
Thhalv10009219m.g Eutrema salsugineum HOM05D006996 ORTHO05D008961 1.7e-36 155.6 85 84.7
Sp1g04060 Schrenkiella parvula HOM05D006996 ORTHO05D008961 1.7e-36 155.6 85 84.7
SpUn0024_0080 Schrenkiella parvula HOM05D006996 ORTHO05D008961 1.7e-36 155.6 85 84.7
AL1G14970 Arabidopsis lyrata HOM05D006996 ORTHO05D008961 2.3e-36 155.2 84 84.5
BcaC07g42146 Brassica carinata HOM05D006996 ORTHO05D008961 2.3e-36 155.2 84 84.5
PSO541G2316 Papaver somniferum HOM05D006996 ORTHO05D008961 3.0e-36 154.8 84 83.3
PSO675G8615 Papaver somniferum HOM05D006996 ORTHO05D008961 3.0e-36 154.8 84 83.3
A10p03740 Brassica napus HOM05D006996 ORTHO05D008961 5.0e-36 154.1 85 83.5
C05p03440 Brassica napus HOM05D006996 ORTHO05D008961 5.0e-36 154.1 85 83.5
C08p51920 Brassica napus HOM05D006996 ORTHO05D008961 5.0e-36 154.1 84 83.3
BolC5t29123H Brassica oleracea HOM05D006996 ORTHO05D008961 5.0e-36 154.1 85 83.5
BolC8t52723H Brassica oleracea HOM05D006996 ORTHO05D008961 5.0e-36 154.1 84 83.3
BraA09t42088Z Brassica rapa HOM05D006996 ORTHO05D008961 5.0e-36 154.1 84 83.3
BraA10t42647Z Brassica rapa HOM05D006996 ORTHO05D008961 5.0e-36 154.1 85 83.5
Migut.M00413 Erythranthe guttata HOM05D006996 ORTHO05D008961 4.3e-35 151.0 86 79.1
Glyma.13G308300 Glycine max HOM05D006996 ORTHO05D008961 4.3e-35 151.0 83 80.7
CARHR004680 Cardamine hirsuta HOM05D006996 ORTHO05D008961 5.6e-35 150.6 84 83.3
Aqoxy1G03305 Aquilegia oxysepala HOM05D006996 ORTHO05D008961 9.5e-35 149.8 85 80.0
unitig_21.g20728 Utricularia gibba HOM05D006996 ORTHO05D008961 9.5e-35 149.8 82 79.3
AUR62000730 Chenopodium quinoa HOM05D006996 ORTHO05D008961 1.6e-34 149.1 86 80.2
Lj3g0015321 Lotus japonicus HOM05D006996 ORTHO05D008961 1.6e-34 149.1 88 80.7
Phvul.005G114700 Phaseolus vulgaris HOM05D006996 ORTHO05D008961 2.8e-34 148.3 80 81.2
AUR62021549 Chenopodium quinoa HOM05D006996 ORTHO05D008961 4.7e-34 147.5 86 79.1
AUR62008544 Chenopodium quinoa HOM05D006996 ORTHO05D008961 7.5e-32 140.2 86 76.7
SalBow7G3715 Salvia bowleyana HOM05D006996 ORTHO05D008961 1.7e-31 139.0 87 74.7
CSS0029979 Camellia sinensis var. sinensis HOM05D006996 ORTHO05D008961 2.9e-31 138.3 67 89.6
Lalb_Chr14g0375741 Lupinus albus HOM05D006996 ORTHO05D008961 3.7e-31 137.9 75 77.3
DCAR_014473 Daucus carota HOM05D006996 ORTHO05D008961 2.4e-30 135.2 64 93.8
TAR627G0363 Trochodendron aralioides HOM05D006996 ORTHO05D008961 4.6e-29 131.0 64 90.6
Sc12g0002320 Simmondsia chinensis HOM05D006996 ORTHO05D008961 8.6e-28 126.7 63 87.3
Psat5g264240 Pisum sativum HOM05D006996 ORTHO05D008961 7.3e-27 123.6 61 88.5
Lsat_1_v5_gn_4_184120 Lactuca sativa HOM05D006996 ORTHO05D008961 1.4e-25 119.4 64 78.1
TAR676G0001 Trochodendron aralioides HOM05D006996 ORTHO05D008961 4.1e-22 107.8 52 86.5
COL.COLO4_06384 Corchorus olitorius HOM05D006996 ORTHO05D008961 1.6e-21 105.9 50 92.0
Mapoly0024s0016 Marchantia polymorpha HOM05D006996 ORTHO05D008961 1.2e-18 96.3 63 63.5
SEGI_13346 Sequoiadendron giganteum HOM05D006996 ORTHO05D008961 2.2e-15 85.5 61 62.3
CSS0002917 Camellia sinensis var. sinensis HOM05D006996 ORTHO05D008961 3.5e-13 78.2 39 89.7
MCO13G082 Micromonas commoda HOM05D006996 ORTHO05D008961 7.8e-13 77.0 56 60.7
FAN09G4817 Fragaria x ananassa HOM05D006996 ORTHO05D008961 5.1e-12 74.3 35 94.3
CSS0018135 Camellia sinensis var. sinensis HOM05D006996 ORTHO05D008961 8.7e-12 73.6 39 82.1
TPR.G35081 Trifolium pratense HOM05D006996 ORTHO05D048925 5.3e-09 64.3 38 76.3
BcaB01g06120 Brassica carinata HOM05D006996 ORTHO05D008961 6.9e-09 63.9 39 76.9


User provided reference genes

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