Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv05238 Davidia involucrata HOM05D000489 ORTHO05D000372 1.9e-65 252.3 120 100.0
Peaxi162Scf00526g00719 Petunia axillaris HOM05D000489 ORTHO05D000372 5.5e-17 91.3 75 60.0
Nitab4.5_0000271g0180 Nicotiana tabacum HOM05D000489 ORTHO05D000372 7.5e-14 80.9 75 56.0
Sopen06g030070 Solanum pennellii HOM05D000489 ORTHO05D000372 4.8e-13 78.2 76 55.3
Dinv32088 Davidia involucrata HOM05D000489 ORTHO05D000372 8.3e-13 77.4 60 66.7
Oeu048803.2 Olea europaea HOM05D000489 ORTHO05D000372 1.1e-12 77.0 72 56.9
MSTRG.18481 Avicennia marina HOM05D000489 ORTHO05D000372 1.8e-12 76.3 76 53.9
Gohir.D13G225300 Gossypium hirsutum HOM05D000489 ORTHO05D000372 2.0e-11 72.8 78 48.7
Gorai.013G256100 Gossypium raimondii HOM05D000489 ORTHO05D000372 2.0e-11 72.8 78 48.7
Gohir.A13G221300 Gossypium hirsutum HOM05D000489 ORTHO05D000372 2.7e-11 72.4 78 48.7
Solyc06g073660.3 Solanum lycopersicum HOM05D000489 ORTHO05D000372 3.5e-11 72.0 65 55.4
Nitab4.5_0002184g0120 Nicotiana tabacum HOM05D000489 ORTHO05D000372 1.0e-10 70.5 75 53.3
TAR633G0728 Trochodendron aralioides HOM05D000489 ORTHO05D000372 1.0e-10 70.5 76 51.3
Lj6g0021468 Lotus japonicus HOM05D000489 ORTHO05D000372 2.3e-10 69.3 72 55.6
MSTRG.21316 Avicennia marina HOM05D000489 ORTHO05D000372 2.9e-10 68.9 75 48.0
Nitab4.5_0009952g0020 Nicotiana tabacum HOM05D000489 ORTHO05D000372 2.9e-10 68.9 81 51.9
Peaxi162Scf00978g00116 Petunia axillaris HOM05D000489 ORTHO05D000372 2.9e-10 68.9 82 50.0
Cc01_g07620 Coffea canephora HOM05D000489 ORTHO05D000372 3.8e-10 68.6 88 47.7
COL.COLO4_25284 Corchorus olitorius HOM05D000489 ORTHO05D000372 3.8e-10 68.6 73 49.3
Oeu032071.1 Olea europaea HOM05D000489 ORTHO05D000372 3.8e-10 68.6 82 48.8
SGA_v2.0_scaffold29G12127 Striga asiatica HOM05D000489 ORTHO05D000372 5.0e-10 68.2 76 52.6
Duzib170G0023 Durio zibethinus HOM05D000489 ORTHO05D000372 8.6e-10 67.4 71 46.5
Thecc.09G263000 Theobroma cacao HOM05D000489 ORTHO05D000372 8.6e-10 67.4 63 54.0
TWI31G0305 Tripterygium wilfordii HOM05D000489 ORTHO05D000372 8.6e-10 67.4 76 47.4
Actinidia22472 Actinidia chinensis HOM05D000489 ORTHO05D000372 1.9e-09 66.2 76 47.4
Nn7g37277 Nelumbo nucifera HOM05D000489 ORTHO05D000372 1.9e-09 66.2 39 71.8
SGA_v2.0_scaffold8G04510 Striga asiatica HOM05D000489 ORTHO05D000372 1.9e-09 66.2 77 48.1
SalBow6G0549 Salvia bowleyana HOM05D000489 ORTHO05D000372 3.3e-09 65.5 46 60.9
Nitab4.5_0002567g0050 Nicotiana tabacum HOM05D000489 ORTHO05D000372 4.2e-09 65.1 81 48.1
Sc21g0006520 Simmondsia chinensis HOM05D000489 ORTHO05D000372 4.2e-09 65.1 48 62.5
PGR102G1038 Punica granatum HOM05D000489 ORTHO05D000372 7.2e-09 64.3 73 52.1
Gohir.A07G115300 Gossypium hirsutum HOM05D000489 ORTHO05D000372 9.5e-09 63.9 69 50.7
Actinidia37190 Actinidia chinensis HOM05D000489 ORTHO05D000372 1.2e-08 63.5 47 63.8
CAN.G65.212 Capsicum annuum HOM05D000489 ORTHO05D000372 1.2e-08 63.5 75 49.3
Rhsim13G0200700 Rhododendron simsii HOM05D000489 ORTHO05D000372 1.2e-08 63.5 37 73.0
Gorai.001G128800 Gossypium raimondii HOM05D000489 ORTHO05D000372 1.6e-08 63.2 69 50.7
Lalb_Chr09g0335101 Lupinus albus HOM05D000489 ORTHO05D000372 1.6e-08 63.2 64 51.6
Hund20981 Selenicereus undatus HOM05D000489 ORTHO05D000372 1.6e-08 63.2 50 58.0
TWI79G1721 Tripterygium wilfordii HOM05D000489 ORTHO05D000372 1.6e-08 63.2 76 48.7
Duzib168G2403 Durio zibethinus HOM05D000489 ORTHO05D000372 2.1e-08 62.8 71 46.5
FAN11G1773 Fragaria x ananassa HOM05D000489 ORTHO05D000372 2.1e-08 62.8 68 52.9
Glyma.20G049800 Glycine max HOM05D000489 ORTHO05D000372 2.1e-08 62.8 51 62.7
Gohir.D07G119500 Gossypium hirsutum HOM05D000489 ORTHO05D000372 2.1e-08 62.8 69 50.7
FvH4_3g27100 Fragaria vesca HOM05D000489 ORTHO05D000372 2.8e-08 62.4 37 73.0
FAN25G1718 Fragaria x ananassa HOM05D000489 ORTHO05D000372 2.8e-08 62.4 37 73.0
Ah.08g222730 Amaranthus hybridus HOM05D002616 ORTHO05D000372 3.6e-08 62.0 72 44.4
arahy.Tifrunner.gnm1.ann1.E295CW Arachis hypogaea HOM05D000489 ORTHO05D000372 3.6e-08 62.0 66 56.1
PSO339G5551 Papaver somniferum HOM05D000489 ORTHO05D000372 4.7e-08 61.6 76 44.7
PGR119G0014 Punica granatum HOM05D000489 ORTHO05D000372 4.7e-08 61.6 67 47.8
Hund18827 Selenicereus undatus HOM05D000489 ORTHO05D000372 4.7e-08 61.6 82 43.9
vmacro04114 Vaccinium macrocarpon HOM05D000489 ORTHO05D000372 4.7e-08 61.6 86 43.0
Zm00001eb015430 Zea mays HOM05D000489 ORTHO05D000372 4.7e-08 61.6 62 53.2
FAN16G0488 Fragaria x ananassa HOM05D000489 ORTHO05D000372 6.1e-08 61.2 37 73.0
FAN21G4015 Fragaria x ananassa HOM05D000489 ORTHO05D000372 6.1e-08 61.2 37 73.0
PSO384G4201 Papaver somniferum HOM05D000489 ORTHO05D000372 8.0e-08 60.8 76 44.7
arahy.Tifrunner.gnm1.ann1.DG98DY Arachis hypogaea HOM05D000489 ORTHO05D000372 1.0e-07 60.5 41 70.7
TPR.G32859 Trifolium pratense HOM05D000489 ORTHO05D000372 1.0e-07 60.5 79 41.8
Ciclev10016831m.g Citrus clementina HOM05D000489 ORTHO05D000372 1.4e-07 60.1 52 55.8
MBI13_g09971_MAGBIO Magnolia biondii HOM05D000489 ORTHO05D000372 1.4e-07 60.1 67 49.3
Medtr3g079210 Medicago truncatula HOM05D000489 ORTHO05D000372 1.4e-07 60.1 80 46.2
RcHm_v2.0_Chr5g0049721 Rosa chinensis HOM05D000489 ORTHO05D000372 1.8e-07 59.7 71 46.5
AL4G20840 Arabidopsis lyrata HOM05D000489 ORTHO05D000372 3.0e-07 58.9 65 43.1
Cpa.g.sc103.73 Carica papaya HOM05D000489 ORTHO05D000372 3.0e-07 58.9 36 66.7
Glyma.13G075700 Glycine max HOM05D000489 ORTHO05D000372 3.0e-07 58.9 76 46.1
Hma1.2p1_0218F.1_g092560 Hydrangea macrophylla HOM05D000489 ORTHO05D000372 3.0e-07 58.9 92 40.2
Lsat_1_v5_gn_9_26661 Lactuca sativa HOM05D000489 ORTHO05D000372 3.0e-07 58.9 81 42.0
HPP92_021161 Vanilla planifolia HOM05D000489 ORTHO05D000372 3.0e-07 58.9 67 47.8
CiPaw.13G128200 Carya illinoinensis HOM05D000489 ORTHO05D000372 4.0e-07 58.5 37 70.3
Lalb_Chr05g0227921 Lupinus albus HOM05D000489 ORTHO05D000372 4.0e-07 58.5 80 47.5
PGSC0003DMG400027400 Solanum tuberosum HOM05D000489 ORTHO05D000372 4.0e-07 58.5 81 46.9
Aqoxy2G00021 Aquilegia oxysepala HOM05D000489 ORTHO05D000372 5.2e-07 58.2 79 45.6
Cfa010252 Carpinus fangiana HOM05D000489 ORTHO05D000372 6.8e-07 57.8 30 80.0
Phvul.L002737 Phaseolus vulgaris HOM05D000489 ORTHO05D000372 6.8e-07 57.8 31 77.4
CDE09G1342 Ceratophyllum demersum HOM05D000489 ORTHO05D000372 8.9e-07 57.4 67 41.8
Prupe.6G152000 Prunus persica HOM05D000489 ORTHO05D000372 8.9e-07 57.4 39 64.1
Eucgr.J00621 Eucalyptus grandis HOM05D000489 ORTHO05D000372 1.5e-06 56.6 63 47.6
MD11G1179700 Malus domestica HOM05D000489 ORTHO05D000372 1.5e-06 56.6 69 47.8
Solyc11g072030.3 Solanum lycopersicum HOM05D000489 ORTHO05D000372 1.5e-06 56.6 81 45.7
MSTRG.17657 Avicennia marina HOM05D000489 ORTHO05D000372 2.0e-06 56.2 33 66.7
BcaB02g10073 Brassica carinata HOM05D000489 ORTHO05D000372 2.0e-06 56.2 66 42.4
Potri.009G158100 Populus trichocarpa HOM05D000489 ORTHO05D000372 2.0e-06 56.2 76 43.4
AT2G27130 Arabidopsis thaliana HOM05D000489 ORTHO05D000372 2.6e-06 55.8 69 37.7
SGA_v2.0_scaffold79G25525 Striga asiatica HOM05D000489 ORTHO05D000372 2.6e-06 55.8 74 44.6
CARHR119480 Cardamine hirsuta HOM05D000489 ORTHO05D000372 3.4e-06 55.5 69 39.1
ECA247G2167 Erigeron canadensis HOM05D000489 ORTHO05D000372 3.4e-06 55.5 80 38.8
unitig_62.g23873 Utricularia gibba HOM05D000489 ORTHO05D000372 3.4e-06 55.5 73 41.1
EL10Ac7g16225 Beta vulgaris HOM05D000489 ORTHO05D000372 4.4e-06 55.1 32 68.8
Psat5g112720 Pisum sativum HOM05D000489 ORTHO05D000372 4.4e-06 55.1 81 45.7
DCAR_023859 Daucus carota HOM05D000489 ORTHO05D000372 5.7e-06 54.7 57 47.4
Actinidia07015 Actinidia chinensis HOM05D000489 ORTHO05D000372 7.5e-06 54.3 79 44.3
Thhalv10002172m.g Eutrema salsugineum HOM05D000489 ORTHO05D000372 7.5e-06 54.3 73 41.1
HanXRQChr10g0300691 Helianthus annuus HOM05D000489 ORTHO05D000372 7.5e-06 54.3 33 66.7
THA.LOC104826478 Tarenaya hassleriana HOM05D000489 ORTHO05D000372 7.5e-06 54.3 73 43.8
unitig_0.g309 Utricularia gibba HOM05D005230 ORTHO05D006506 9.8e-06 53.9 66 43.9


User provided reference genes

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