Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv05169 Davidia involucrata HOM05D000963 ORTHO05D004715 6.2e-105 384.0 180 100.0
Dinv39831 Davidia involucrata HOM05D000963 ORTHO05D004715 5.5e-37 158.3 82 90.2
Lsat_1_v5_gn_5_181901 Lactuca sativa HOM05D000963 ORTHO05D004715 8.0e-36 154.5 85 85.9
Lsat_1_v5_gn_5_4701 Lactuca sativa HOM05D000963 ORTHO05D004715 8.0e-36 154.5 85 85.9
Lsat_1_v5_gn_1_88180 Lactuca sativa HOM05D000963 ORTHO05D004715 2.3e-35 152.9 80 90.0
Lsat_1_v5_gn_2_50801 Lactuca sativa HOM05D000963 ORTHO05D004715 2.3e-35 152.9 80 90.0
Lsat_1_v5_gn_2_97121 Lactuca sativa HOM05D000963 ORTHO05D004715 2.3e-35 152.9 80 90.0
Lsat_1_v5_gn_9_121741 Lactuca sativa HOM05D000963 ORTHO05D004715 2.3e-35 152.9 80 90.0
QL10p017079 Quercus lobata HOM05D000963 ORTHO05D004715 2.3e-35 152.9 80 90.0
QL93p0141_0026 Quercus lobata HOM05D000963 ORTHO05D004715 2.3e-35 152.9 80 90.0
Sed0014585 Sechium edule HOM05D000963 ORTHO05D004715 2.3e-35 152.9 80 90.0
Migut.D01391 Erythranthe guttata HOM05D000963 ORTHO05D004715 5.2e-35 151.8 80 88.8
Atru.chr1.3576 Acer truncatum HOM05D000963 ORTHO05D004715 6.8e-35 151.4 80 88.8
BolC9t56918H Brassica oleracea HOM05D000963 ORTHO05D004715 8.8e-35 151.0 80 87.5
DCAR_014935 Daucus carota HOM05D000963 ORTHO05D004715 1.2e-34 150.6 80 88.8
Lsat_1_v5_gn_8_139840 Lactuca sativa HOM05D000963 ORTHO05D004715 1.2e-34 150.6 80 88.8
Potri.011G074033 Populus trichocarpa HOM05D000963 ORTHO05D004715 3.4e-34 149.1 80 87.5
AL9U11970 Arabidopsis lyrata HOM05D000963 ORTHO05D004715 4.4e-34 148.7 80 87.5
arahy.Tifrunner.gnm1.ann1.0QCF99 Arachis hypogaea HOM05D000963 ORTHO05D004715 4.4e-34 148.7 93 77.4
arahy.Tifrunner.gnm1.ann1.6K111H Arachis hypogaea HOM05D000963 ORTHO05D004715 4.4e-34 148.7 93 77.4
arahy.Tifrunner.gnm1.ann1.B9EW81 Arachis hypogaea HOM05D000963 ORTHO05D004715 4.4e-34 148.7 93 77.4
arahy.Tifrunner.gnm1.ann1.NMB5YK Arachis hypogaea HOM05D000963 ORTHO05D004715 4.4e-34 148.7 93 77.4
arahy.Tifrunner.gnm1.ann1.QIDR5S Arachis hypogaea HOM05D000963 ORTHO05D004715 4.4e-34 148.7 93 77.4
C09p40280 Brassica napus HOM05D000963 ORTHO05D004715 4.4e-34 148.7 80 87.5
BolSC44t60816H Brassica oleracea HOM05D000963 ORTHO05D004715 4.4e-34 148.7 80 87.5
BolSC44t60829H Brassica oleracea HOM05D000963 ORTHO05D004715 4.4e-34 148.7 80 87.5
BolSC45t60916H Brassica oleracea HOM05D000963 ORTHO05D004715 4.4e-34 148.7 80 87.5
BolSC49t61135H Brassica oleracea HOM05D000963 ORTHO05D004715 4.4e-34 148.7 80 87.5
BraSC103t45422Z Brassica rapa HOM05D000963 ORTHO05D004715 4.4e-34 148.7 80 87.5
BraSC103t45433Z Brassica rapa HOM05D000963 ORTHO05D004715 4.4e-34 148.7 80 87.5
BraSC138t45541Z Brassica rapa HOM05D000963 ORTHO05D004715 4.4e-34 148.7 80 87.5
BraSC25t45904Z Brassica rapa HOM05D000963 ORTHO05D004715 4.4e-34 148.7 80 87.5
BraSC25t45917Z Brassica rapa HOM05D000963 ORTHO05D004715 4.4e-34 148.7 80 87.5
BraSC58t46456Z Brassica rapa HOM05D000963 ORTHO05D004715 4.4e-34 148.7 80 87.5
QL93p0141_0000 Quercus lobata HOM05D000963 ORTHO05D004715 4.4e-34 148.7 80 87.5
arahy.Tifrunner.gnm1.ann1.0S9V2W Arachis hypogaea HOM05D000963 ORTHO05D004715 5.7e-34 148.3 80 86.2
arahy.Tifrunner.gnm1.ann1.56M0GV Arachis hypogaea HOM05D000963 ORTHO05D004715 5.7e-34 148.3 80 86.2
arahy.Tifrunner.gnm1.ann1.E29LBX Arachis hypogaea HOM05D000963 ORTHO05D004715 5.7e-34 148.3 80 86.2
arahy.Tifrunner.gnm1.ann1.NRNC1F Arachis hypogaea HOM05D000963 ORTHO05D004715 5.7e-34 148.3 80 86.2
arahy.Tifrunner.gnm1.ann1.PH4GL6 Arachis hypogaea HOM05D000963 ORTHO05D004715 5.7e-34 148.3 80 86.2
arahy.Tifrunner.gnm1.ann1.RS9AFF Arachis hypogaea HOM05D000963 ORTHO05D004715 5.7e-34 148.3 80 86.2
arahy.Tifrunner.gnm1.ann1.TDDH8C Arachis hypogaea HOM05D000963 ORTHO05D004715 5.7e-34 148.3 80 86.2
arahy.Tifrunner.gnm1.ann1.UGP0DD Arachis hypogaea HOM05D000963 ORTHO05D004715 5.7e-34 148.3 80 86.2
arahy.Tifrunner.gnm1.ann1.WD30LQ Arachis hypogaea HOM05D000963 ORTHO05D004715 5.7e-34 148.3 80 86.2
arahy.Tifrunner.gnm1.ann1.ZA1EMG Arachis hypogaea HOM05D000963 ORTHO05D004715 5.7e-34 148.3 80 86.2
FvH4_c3g00050 Fragaria vesca HOM05D000963 ORTHO05D004715 1.3e-33 147.1 80 87.5
Sopen06g015060 Solanum pennellii HOM05D000963 ORTHO05D004715 1.3e-33 147.1 81 87.7
PGSC0003DMG400034831 Solanum tuberosum HOM05D000963 ORTHO05D004715 1.3e-33 147.1 81 87.7
arahy.Tifrunner.gnm1.ann1.54C0KZ Arachis hypogaea HOM05D000963 ORTHO05D004715 1.7e-33 146.7 80 85.0
COL.COLO4_02154 Corchorus olitorius HOM05D000963 ORTHO05D004715 2.2e-33 146.4 80 86.2
Sed0012027 Sechium edule HOM05D000963 ORTHO05D004715 2.2e-33 146.4 80 86.2
Aqoxy38s008 Aquilegia oxysepala HOM05D000963 ORTHO05D004715 2.8e-33 146.0 80 86.2
arahy.Tifrunner.gnm1.ann1.WSE485 Arachis hypogaea HOM05D000963 ORTHO05D004715 2.8e-33 146.0 80 85.0
BolSC29t60541H Brassica oleracea HOM05D000963 ORTHO05D004715 4.8e-33 145.2 80 85.0
BolSC37t60787H Brassica oleracea HOM05D000963 ORTHO05D004715 1.1e-32 144.1 81 86.4
CAN.G929.1 Capsicum annuum HOM05D000963 ORTHO05D004715 1.1e-32 144.1 81 86.4
Gohir.D03G074976 Gossypium hirsutum HOM05D000963 ORTHO05D004715 1.1e-32 144.1 80 85.0
Gohir.A02G134101 Gossypium hirsutum HOM05D000963 ORTHO05D004715 1.4e-32 143.7 137 58.4
CAN.G965.10 Capsicum annuum HOM05D000963 ORTHO05D004715 1.8e-32 143.3 86 81.4
Actinidia23508 Actinidia chinensis HOM05D000963 ORTHO05D004715 3.1e-32 142.5 79 86.1
CAN.G1298.20 Capsicum annuum HOM05D000963 ORTHO05D004715 3.1e-32 142.5 81 85.2
arahy.Tifrunner.gnm1.ann1.R4PVYI Arachis hypogaea HOM05D000963 ORTHO05D004715 4.1e-32 142.1 80 82.5
CsaV3_2G008200 Cucumis sativus L. HOM05D000963 ORTHO05D004715 4.1e-32 142.1 77 85.7
ECA074G0007 Erigeron canadensis HOM05D000963 ORTHO05D004715 4.1e-32 142.1 76 89.5
ECA074G0008 Erigeron canadensis HOM05D000963 ORTHO05D004715 4.1e-32 142.1 76 89.5
Sed0003522 Sechium edule HOM05D000963 ORTHO05D004715 4.1e-32 142.1 76 89.5
Sed0006422 Sechium edule HOM05D000963 ORTHO05D004715 4.1e-32 142.1 76 89.5
BraSC59t46533Z Brassica rapa HOM05D000963 ORTHO05D004715 5.4e-32 141.7 80 83.8
Gohir.1Z049781 Gossypium hirsutum HOM05D000963 ORTHO05D004715 1.2e-31 140.6 80 83.8
Gohir.A04G057626 Gossypium hirsutum HOM05D000963 ORTHO05D004715 2.0e-31 139.8 80 82.5
CAN.G67.2 Capsicum annuum HOM05D000963 ORTHO05D004715 2.7e-31 139.4 81 84.0
HPP92_028419 Vanilla planifolia HOM05D000963 ORTHO05D004715 2.7e-31 139.4 93 73.1
HPP92_028432 Vanilla planifolia HOM05D000963 ORTHO05D004715 2.7e-31 139.4 93 73.1
Gohir.A05G286366 Gossypium hirsutum HOM05D000963 ORTHO05D004715 5.9e-31 138.3 80 83.8
Gohir.A07G151200 Gossypium hirsutum HOM05D000963 ORTHO05D004715 5.9e-31 138.3 80 82.5
Sabra11G0069300 Salix brachista HOM05D000963 ORTHO05D004715 1.3e-30 137.1 76 86.8
Gohir.D04G054150 Gossypium hirsutum HOM05D000963 ORTHO05D004715 1.7e-30 136.7 80 81.2
Gohir.D04G096676 Gossypium hirsutum HOM05D000963 ORTHO05D004715 2.9e-30 136.0 80 80.0
HPP92_028383 Vanilla planifolia HOM05D000963 ORTHO05D004715 2.9e-30 136.0 93 72.0
HPP92_028406 Vanilla planifolia HOM05D000963 ORTHO05D004715 2.9e-30 136.0 93 72.0
HPP92_028415 Vanilla planifolia HOM05D000963 ORTHO05D004715 2.9e-30 136.0 93 72.0
arahy.Tifrunner.gnm1.ann1.LM30Y3 Arachis hypogaea HOM05D000963 ORTHO05D004715 6.5e-30 134.8 93 71.0
Nitab4.5_0008665g0030 Nicotiana tabacum HOM05D000963 ORTHO05D004715 6.5e-30 134.8 82 79.3
Sc01g0005720 Simmondsia chinensis HOM05D000963 ORTHO05D004715 6.5e-30 134.8 85 76.5
Oeu015131.2 Olea europaea HOM05D000963 ORTHO05D004715 8.6e-30 134.4 83 74.7
FAN13G1706 Fragaria x ananassa HOM05D000963 ORTHO05D004715 2.5e-29 132.9 76 85.5
Gorai.002G027900 Gossypium raimondii HOM05D000963 ORTHO05D004715 5.5e-29 131.7 76 81.6
Medtr5g080940 Medicago truncatula HOM05D000963 ORTHO05D004715 7.2e-29 131.3 79 79.7
HPP92_028430 Vanilla planifolia HOM05D000963 ORTHO05D004715 7.2e-29 131.3 80 78.8
Lsat_1_v5_gn_1_109481 Lactuca sativa HOM05D000963 ORTHO05D004715 1.6e-28 130.2 80 78.8
Gohir.D01G023469 Gossypium hirsutum HOM05D000963 ORTHO05D004715 1.0e-27 127.5 76 81.6
Gorai.012G060700 Gossypium raimondii HOM05D000963 ORTHO05D004715 1.4e-27 127.1 76 80.3
CAN.G1185.10 Capsicum annuum HOM05D000963 ORTHO05D004715 5.2e-27 125.2 95 66.3
FAN18G1953 Fragaria x ananassa HOM05D000315 ORTHO05D004100 3.4e-26 122.5 75 80.0
BraSC143t45652Z Brassica rapa HOM05D000963 ORTHO05D004715 5.7e-26 121.7 81 75.3
C09p39330 Brassica napus HOM05D000963 ORTHO05D004715 6.3e-25 118.2 80 72.5
Gohir.A04G039030 Gossypium hirsutum HOM05D000963 ORTHO05D004715 8.3e-25 117.9 71 81.7
Gohir.D01G169154 Gossypium hirsutum HOM05D000963 ORTHO05D004715 8.3e-25 117.9 73 79.5
Phvul.003G259600 Phaseolus vulgaris HOM05D000963 ORTHO05D004715 1.8e-24 116.7 78 74.4
unitig_91.g26522 Utricularia gibba HOM05D000963 ORTHO05D004715 1.8e-24 116.7 75 73.3
unitig_91.g26525 Utricularia gibba HOM05D000963 ORTHO05D004715 1.8e-24 116.7 75 73.3
Rhsim12G0135200 Rhododendron simsii HOM05D000963 ORTHO05D004715 2.4e-24 116.3 56 91.1
Oeu050315.1 Olea europaea HOM05D000963 ORTHO05D004715 4.1e-24 115.5 65 87.7
Oeu012821.1 Olea europaea HOM05D000963 ORTHO05D004715 9.2e-24 114.4 86 68.6
arahy.Tifrunner.gnm1.ann1.D5AR02 Arachis hypogaea HOM05D000963 ORTHO05D004715 1.2e-23 114.0 60 86.7
BcaNung01516 Brassica carinata HOM05D000963 ORTHO05D004715 6.6e-22 108.2 57 84.2
Gohir.A01G139826 Gossypium hirsutum HOM05D000963 ORTHO05D004715 2.5e-21 106.3 80 65.0
SalBow1G2814 Salvia bowleyana HOM05D000963 ORTHO05D004715 1.2e-20 104.0 66 78.8
SalBow1G5969 Salvia bowleyana HOM05D000963 ORTHO05D004715 1.2e-20 104.0 66 78.8
Sed0011513 Sechium edule HOM05D000963 ORTHO05D004715 1.2e-20 104.0 76 72.4
VMungo0331G0858 Vigna mungo HOM05D000963 ORTHO05D004715 1.2e-20 104.0 56 82.1
Glyma.06G274000 Glycine max HOM05D000963 ORTHO05D004715 6.1e-20 101.7 78 69.2
BraSC59t46506Z Brassica rapa HOM05D000963 ORTHO05D004715 1.8e-19 100.1 60 83.3
DCAR_017253 Daucus carota HOM05D000963 ORTHO05D004715 3.4e-18 95.9 56 83.9
Sc25g0002020 Simmondsia chinensis HOM05D000963 ORTHO05D004715 1.3e-17 94.0 57 75.4
Hma1.2p1_0051F.1_g029250 Hydrangea macrophylla HOM05D000963 ORTHO05D004715 1.4e-16 90.5 42 90.5
Psat3g162200 Pisum sativum HOM05D000963 ORTHO05D004715 7.0e-16 88.2 47 80.9
CSS0016818 Camellia sinensis var. sinensis HOM05D000963 ORTHO05D004715 1.6e-15 87.0 43 86.0
Medtr1g105230 Medicago truncatula HOM05D000963 ORTHO05D004715 1.0e-14 84.3 40 90.0
Mapoly0147s0015 Marchantia polymorpha HOM05D000963 ORTHO05D004715 8.6e-14 81.3 45 77.8
CAN.G1594.2 Capsicum annuum HOM05D016096 ORTHO05D016167 7.3e-13 78.2 73 54.8
Nitab4.5_0012234g0080 Nicotiana tabacum HOM05D000963 ORTHO05D004715 7.3e-13 78.2 65 64.6
SabraPtG0005400 Salix brachista HOM05D000963 ORTHO05D004715 7.3e-13 78.2 58 72.4
Gohir.A01G139250 Gossypium hirsutum HOM05D000963 ORTHO05D004715 1.6e-12 77.0 36 91.7
Gohir.D11G164850 Gossypium hirsutum HOM05D000963 ORTHO05D004715 8.0e-12 74.7 48 79.2
TPR.G27622 Trifolium pratense HOM05D000963 ORTHO05D004715 8.0e-12 74.7 36 86.1
Nitab4.5_0004137g0020 Nicotiana tabacum HOM05D000963 ORTHO05D004715 6.8e-11 71.6 50 78.0
Lsat_1_v5_gn_2_90421 Lactuca sativa HOM05D000963 ORTHO05D004715 1.2e-10 70.9 49 77.6
Sabra08G0089800 Salix brachista HOM05D000963 ORTHO05D004715 2.0e-10 70.1 75 53.3
Psat5g119040 Pisum sativum HOM05D000963 ORTHO05D004715 5.8e-10 68.6 110 40.0
arahy.Tifrunner.gnm1.ann1.3DS1LI Arachis hypogaea HOM05D004473 ORTHO05D005652 2.4e-08 63.2 39 76.9
arahy.Tifrunner.gnm1.ann1.SGP77C Arachis hypogaea HOM05D004473 ORTHO05D005652 2.4e-08 63.2 39 76.9
Nitab4.5_0007400g0120 Nicotiana tabacum HOM05D000963 ORTHO05D004715 4.1e-08 62.4 50 72.0
Manes.18G094701 Manihot esculenta HOM05D000963 ORTHO05D004715 9.2e-08 61.2 36 86.1
Gohir.A01G119775 Gossypium hirsutum HOM05D000963 ORTHO05D004715 2.3e-06 56.6 38 76.3
Gorai.002G200300 Gossypium raimondii HOM05D000963 ORTHO05D004715 8.6e-06 54.7 25 84.0
Potri.002G263451 Populus trichocarpa HOM05D000963 ORTHO05D004715 8.6e-06 54.7 38 73.7


User provided reference genes

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