Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv05161 Davidia involucrata HOM05D007719 ORTHO05D009782 1.9e-256 888.6 447 100.0
CSS0046068 Camellia sinensis var. sinensis HOM05D007719 ORTHO05D009782 4.5e-197 691.4 418 83.0
Actinidia36679 Actinidia chinensis HOM05D007719 ORTHO05D009782 1.7e-191 672.9 418 80.4
vmacro10633 Vaccinium macrocarpon HOM05D007719 ORTHO05D009782 3.7e-191 671.8 416 81.5
Rhsim09G0099000 Rhododendron simsii HOM05D007719 ORTHO05D009782 1.2e-189 666.8 417 81.3
TAR629G1042 Trochodendron aralioides HOM05D007719 ORTHO05D009782 1.6e-189 666.4 413 82.6
QL01p001957 Quercus lobata HOM05D007719 ORTHO05D009782 3.2e-187 658.7 407 81.8
Potri.010G114100 Populus trichocarpa HOM05D007719 ORTHO05D009782 1.0e-185 653.7 400 81.5
ECA234G0976 Erigeron canadensis HOM05D007719 ORTHO05D009782 2.0e-184 649.4 386 82.4
FAN12G3181 Fragaria x ananassa HOM05D007719 ORTHO05D009782 2.0e-184 649.4 409 79.2
CiPaw.05G248600 Carya illinoinensis HOM05D007719 ORTHO05D009782 1.7e-183 646.4 408 80.9
MD16G1029600 Malus domestica HOM05D007719 ORTHO05D009782 6.3e-183 644.4 407 80.6
RcHm_v2.0_Chr4g0441071 Rosa chinensis HOM05D007719 ORTHO05D009782 1.1e-182 643.7 410 78.8
FvH4_4g32280 Fragaria vesca HOM05D007719 ORTHO05D009782 1.8e-182 642.9 403 79.7
Gorai.008G166400 Gossypium raimondii HOM05D007719 ORTHO05D009782 7.7e-181 637.5 414 78.0
Gohir.A12G150300 Gossypium hirsutum HOM05D007719 ORTHO05D009782 1.3e-180 636.7 414 78.3
FAN22G2057 Fragaria x ananassa HOM05D007719 ORTHO05D009782 2.2e-180 636.0 409 77.8
Lalb_Chr17g0338681 Lupinus albus HOM05D007719 ORTHO05D009782 3.8e-180 635.2 393 81.2
FAN07G1524 Fragaria x ananassa HOM05D007719 ORTHO05D009782 5.5e-179 631.3 437 73.7
Atru.chr11.428 Acer truncatum HOM05D007719 ORTHO05D009782 7.2e-179 630.9 405 78.8
Lsat_1_v5_gn_4_14941 Lactuca sativa HOM05D007719 ORTHO05D009782 2.3e-177 625.9 373 81.2
HanXRQChr17g0566951 Helianthus annuus HOM05D007719 ORTHO05D009782 4.0e-177 625.2 386 78.8
Sopen05g004110 Solanum pennellii HOM05D007719 ORTHO05D009782 4.0e-177 625.2 395 80.0
CAN.G1334.8 Capsicum annuum HOM05D007719 ORTHO05D009782 1.2e-176 623.6 388 80.2
MSTRG.23215 Avicennia marina HOM05D007719 ORTHO05D009782 1.7e-175 619.8 413 76.5
COL.COLO4_20469 Corchorus olitorius HOM05D007719 ORTHO05D009782 2.8e-175 619.0 440 73.0
Solyc05g008270.3 Solanum lycopersicum HOM05D007719 ORTHO05D009782 3.7e-175 618.6 394 79.4
TWI75G0056 Tripterygium wilfordii HOM05D007719 ORTHO05D009782 3.7e-175 618.6 414 75.4
Manes.15G114900 Manihot esculenta HOM05D007719 ORTHO05D009782 6.3e-175 617.8 359 84.1
Medtr1g030640 Medicago truncatula HOM05D007719 ORTHO05D009782 1.1e-174 617.1 381 79.0
Glyma.09G119300 Glycine max HOM05D007719 ORTHO05D009782 3.1e-174 615.5 416 75.0
Psat0s3407g0080 Pisum sativum HOM05D007719 ORTHO05D009782 4.1e-174 615.1 384 79.4
Eucgr.G02196 Eucalyptus grandis HOM05D007719 ORTHO05D009782 7.0e-174 614.4 416 76.0
TPR.G36961 Trifolium pratense HOM05D007719 ORTHO05D009782 2.0e-173 612.8 379 78.9
FAN17G2178 Fragaria x ananassa HOM05D007719 ORTHO05D009782 4.5e-173 611.7 356 83.4
Oeu034423.3 Olea europaea HOM05D007719 ORTHO05D009782 7.7e-173 610.9 447 71.6
VMungo1215G2618 Vigna mungo HOM05D007719 ORTHO05D009782 1.0e-172 610.5 377 79.8
ClCG01G006100 Citrullus lanatus HOM05D007719 ORTHO05D009782 1.7e-172 609.8 423 74.0
PGR119G0428 Punica granatum HOM05D007719 ORTHO05D009782 1.7e-172 609.8 378 79.9
Cc11_g08840 Coffea canephora HOM05D007719 ORTHO05D009782 5.0e-172 608.2 427 73.5
CsaV3_5G028560 Cucumis sativus L. HOM05D007719 ORTHO05D009782 5.0e-172 608.2 416 74.0
Phvul.003G022800 Phaseolus vulgaris HOM05D007719 ORTHO05D009782 1.9e-171 606.3 376 79.8
Hund24987 Selenicereus undatus HOM05D007719 ORTHO05D009782 1.9e-171 606.3 376 79.8
PGSC0003DMG400030550 Solanum tuberosum HOM05D007719 ORTHO05D009782 4.2e-171 605.1 430 73.5
Lj2g0007830 Lotus japonicus HOM05D007719 ORTHO05D009782 5.5e-171 604.7 371 79.8
Sed0008286 Sechium edule HOM05D007719 ORTHO05D009782 5.5e-171 604.7 412 74.3
Ca_25710_v3 Cicer arietinum L. HOM05D007719 ORTHO05D009782 1.6e-170 603.2 381 79.0
Sc11g0004120 Simmondsia chinensis HOM05D007719 ORTHO05D009782 2.3e-169 599.4 371 79.5
EL10Ac3g06304 Beta vulgaris HOM05D007719 ORTHO05D009782 6.8e-169 597.8 417 73.9
Sabra10G0084100 Salix brachista HOM05D007719 ORTHO05D009782 6.8e-169 597.8 414 72.7
AUR62002606 Chenopodium quinoa HOM05D007719 ORTHO05D009782 1.2e-168 597.0 394 76.1
AUR62030024 Chenopodium quinoa HOM05D007719 ORTHO05D009782 2.6e-168 595.9 391 76.2
DCAR_030215 Daucus carota HOM05D007719 ORTHO05D009782 7.5e-168 594.3 361 81.4
SalBow5G1767 Salvia bowleyana HOM05D007719 ORTHO05D009782 2.2e-167 592.8 408 75.5
arahy.Tifrunner.gnm1.ann1.Y8VIVB Arachis hypogaea HOM05D007719 ORTHO05D009782 8.3e-167 590.9 383 74.9
Ah.07g204110 Amaranthus hybridus HOM05D007719 ORTHO05D009782 1.4e-166 590.1 392 76.3
Nitab4.5_0004776g0060 Nicotiana tabacum HOM05D007719 ORTHO05D009782 1.3e-164 583.6 352 81.2
SGA_v2.0_scaffold25G10737 Striga asiatica HOM05D007719 ORTHO05D009782 8.6e-164 580.9 437 71.4
Migut.O00274 Erythranthe guttata HOM05D007719 ORTHO05D009782 1.1e-163 580.5 407 73.7
ATR0686G226 Amborella trichopoda HOM05D007719 ORTHO05D009782 2.8e-162 575.9 371 76.0
Peaxi162Scf00205g00122 Petunia axillaris HOM05D007719 ORTHO05D009782 4.4e-160 568.5 405 72.3
Prupe.1G323300 Prunus persica HOM05D007719 ORTHO05D009782 1.3e-159 567.0 361 80.1
HPP92_021852 Vanilla planifolia HOM05D007719 ORTHO05D009782 1.1e-155 553.9 390 69.7
SEGI_18275 Sequoiadendron giganteum HOM05D007719 ORTHO05D009782 5.6e-155 551.6 363 74.1
unitig_61.g26194 Utricularia gibba HOM05D007719 ORTHO05D009782 1.2e-154 550.4 352 78.7
Os01g0127400 Oryza sativa ssp. japonica HOM05D007719 ORTHO05D009782 1.4e-153 547.0 400 68.2
arahy.Tifrunner.gnm1.ann1.L198GP Arachis hypogaea HOM05D007719 ORTHO05D009782 3.1e-153 545.8 383 71.3
Actinidia15254 Actinidia chinensis HOM05D007719 ORTHO05D009782 1.2e-152 543.9 412 69.7
Mapoly0070s0076 Marchantia polymorpha HOM05D007719 ORTHO05D009782 6.2e-146 521.5 392 65.6
MELO3C005317.2 Cucumis melo HOM05D007719 ORTHO05D009782 4.1e-142 508.8 399 66.4
Pp3c1_3200 Physcomitrium patens HOM05D007719 ORTHO05D009782 2.7e-141 506.1 354 68.1
GSVIVG01011772001 Vitis vinifera HOM05D007719 ORTHO05D009782 4.6e-141 505.4 371 72.8
SMO236G0033 Selaginella moellendorffii HOM05D007719 ORTHO05D009782 2.0e-136 490.0 347 68.3
SMO236G0110 Selaginella moellendorffii HOM05D007719 ORTHO05D009782 2.0e-136 490.0 347 68.3
CDE04G3405 Ceratophyllum demersum HOM05D007719 ORTHO05D009782 2.9e-135 486.1 382 66.8
Zm00001eb125300 Zea mays HOM05D007719 ORTHO05D009782 1.3e-124 450.7 376 61.4
Cpa.g.sc65.124 Carica papaya HOM05D007719 ORTHO05D009782 2.5e-115 419.9 281 74.7
Thecc.02G280000 Theobroma cacao HOM05D007719 ORTHO05D009782 4.8e-114 415.6 269 77.3
Gohir.D12G153900 Gossypium hirsutum HOM05D007719 ORTHO05D009782 8.4e-111 404.8 277 74.7
SMO187G0003 Selaginella moellendorffii HOM05D007719 ORTHO05D009782 4.2e-110 402.5 347 59.1
Haze_11019 Corylus avellana HOM05D007719 ORTHO05D009782 1.0e-108 397.9 316 67.7
Cfa008596 Carpinus fangiana HOM05D007719 ORTHO05D009782 1.4e-97 360.9 251 73.3
AagrBONN_evm.TU.Sc2ySwM_228.3777 Anthoceros agrestis HOM05D007719 ORTHO05D009782 1.5e-96 357.5 275 65.5
SEGI_23314 Sequoiadendron giganteum HOM05D007719 ORTHO05D009782 6.9e-89 332.0 231 70.1
Nn4g24120 Nelumbo nucifera HOM05D007719 ORTHO05D009782 1.1e-81 308.1 174 86.2
CBR_g12440 Chara braunii HOM05D007719 ORTHO05D009782 1.5e-80 304.3 393 44.8
Duzib268G0649 Durio zibethinus HOM05D007719 ORTHO05D009782 4.2e-70 269.6 223 63.7
GSVIVG01011775001 Vitis vinifera HOM05D007719 ORTHO05D009782 6.1e-61 239.2 145 82.1
Cfa008597 Carpinus fangiana HOM05D007719 ORTHO05D009782 8.3e-58 228.8 140 82.1
Haze_11018 Corylus avellana HOM05D007719 ORTHO05D009782 1.2e-56 224.9 135 83.0
TPR.G29132 Trifolium pratense HOM05D007719 ORTHO05D009782 3.4e-11 73.9 77 55.8


User provided reference genes

Program Settings