Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv05101 Davidia involucrata HOM05D005991 ORTHO05D007408 1.6e-133 479.6 258 100.0
CSS0003210 Camellia sinensis var. sinensis HOM05D005991 ORTHO05D007408 7.5e-96 354.4 260 74.6
Actinidia28298 Actinidia chinensis HOM05D005991 ORTHO05D007408 2.3e-92 342.8 258 74.0
GSVIVG01017637001 Vitis vinifera HOM05D005991 ORTHO05D007408 1.1e-91 340.5 255 74.9
Lj9A696T49 Lonicera japonica HOM05D005991 ORTHO05D007408 4.7e-90 335.1 254 75.6
TAR633G0953 Trochodendron aralioides HOM05D005991 ORTHO05D007408 1.1e-89 334.0 255 74.1
Rhsim02G0001600 Rhododendron simsii HOM05D005991 ORTHO05D007408 1.4e-89 333.6 248 74.6
MBI18_g36460_MAGBIO Magnolia biondii HOM05D005991 ORTHO05D007408 1.8e-89 333.2 255 70.6
TAR362G0621 Trochodendron aralioides HOM05D005991 ORTHO05D007408 2.9e-87 325.9 247 73.7
vmacro19301 Vaccinium macrocarpon HOM05D005991 ORTHO05D007408 1.6e-85 320.1 250 72.0
Cfa015696 Carpinus fangiana HOM05D005991 ORTHO05D007408 2.7e-85 319.3 248 72.2
Eucgr.H04085 Eucalyptus grandis HOM05D005991 ORTHO05D007408 6.0e-85 318.2 254 68.1
Oeu009727.1 Olea europaea HOM05D005991 ORTHO05D007408 6.0e-85 318.2 257 71.2
Actinidia18486 Actinidia chinensis HOM05D005991 ORTHO05D007408 1.7e-84 316.6 258 69.8
Haze_00826 Corylus avellana HOM05D005991 ORTHO05D007408 8.6e-84 314.3 248 71.4
Migut.I00898 Erythranthe guttata HOM05D005991 ORTHO05D007408 8.6e-84 314.3 251 69.7
SGA_v2.0_scaffold66G22528 Striga asiatica HOM05D002451 ORTHO05D005601 4.3e-83 312.0 251 71.3
MSTRG.22639 Avicennia marina HOM05D005991 ORTHO05D007408 7.3e-83 311.2 256 71.1
Nn3g21864 Nelumbo nucifera HOM05D005991 ORTHO05D007408 8.1e-82 307.8 248 69.0
Nitab4.5_0003374g0080 Nicotiana tabacum HOM05D005991 ORTHO05D007408 1.1e-81 307.4 257 69.3
Nitab4.5_0013885g0020 Nicotiana tabacum HOM05D005991 ORTHO05D007408 4.0e-81 305.4 257 66.9
Sc23g0006090 Simmondsia chinensis HOM05D005991 ORTHO05D007408 5.2e-81 305.1 252 69.8
Aqoxy7G00454 Aquilegia oxysepala HOM05D005991 ORTHO05D007408 1.5e-80 303.5 249 68.3
EL10Ac2g02410 Beta vulgaris HOM05D005991 ORTHO05D007408 5.8e-80 301.6 255 67.1
PGSC0003DMG400030844 Solanum tuberosum HOM05D005991 ORTHO05D007408 7.6e-80 301.2 257 66.1
Sopen04g029760 Solanum pennellii HOM05D005991 ORTHO05D007408 6.4e-79 298.1 253 66.0
Lalb_Chr13g0298761 Lupinus albus HOM05D005991 ORTHO05D007408 4.2e-78 295.4 248 67.3
MD13G1147500 Malus domestica HOM05D005991 ORTHO05D007408 7.1e-78 294.7 265 64.9
Glyma.07G232800 Glycine max HOM05D005991 ORTHO05D007408 1.2e-77 293.9 254 66.5
DCAR_019078 Daucus carota HOM05D005991 ORTHO05D007408 2.1e-77 293.1 259 65.3
CAN.G1173.8 Capsicum annuum HOM05D005991 ORTHO05D007408 1.3e-76 290.4 249 67.5
RcHm_v2.0_Chr4g0426321 Rosa chinensis HOM05D005991 ORTHO05D007408 1.7e-76 290.0 267 63.7
Psat0s2692g0080 Pisum sativum HOM05D005991 ORTHO05D007408 2.3e-76 289.7 249 65.1
Solyc04g074800.3 Solanum lycopersicum HOM05D005991 ORTHO05D007408 8.7e-76 287.7 260 63.1
PGR004G0142 Punica granatum HOM05D005991 ORTHO05D007408 2.5e-75 286.2 225 69.8
FAN17G2933 Fragaria x ananassa HOM05D005991 ORTHO05D007408 3.3e-75 285.8 267 62.9
FvH4_4g20890 Fragaria vesca HOM05D005991 ORTHO05D007408 4.3e-75 285.4 267 62.5
Lj4g0017646 Lotus japonicus HOM05D005991 ORTHO05D007408 1.3e-74 283.9 266 61.7
Prupe.1G111000 Prunus persica HOM05D005991 ORTHO05D007408 2.8e-74 282.7 263 63.5
Ca_21401_v3 Cicer arietinum L. HOM05D005991 ORTHO05D007408 1.8e-73 280.0 250 62.8
FAN12G0391 Fragaria x ananassa HOM05D005991 ORTHO05D007408 1.8e-73 280.0 277 60.6
CsaV3_6G000060 Cucumis sativus L. HOM05D005991 ORTHO05D007408 4.0e-73 278.9 249 63.9
Medtr4g123060 Medicago truncatula HOM05D005991 ORTHO05D007408 4.0e-73 278.9 228 67.5
MELO3C021248.2 Cucumis melo HOM05D005991 ORTHO05D007408 5.3e-73 278.5 249 63.5
VMungo1215G0582 Vigna mungo HOM05D005991 ORTHO05D007408 5.3e-73 278.5 254 63.4
TPR.G12610 Trifolium pratense HOM05D005991 ORTHO05D007408 6.9e-73 278.1 249 62.2
unitig_32.g11589 Utricularia gibba HOM05D005991 ORTHO05D007408 9.0e-73 277.7 237 65.0
Peaxi162Scf00139g00312 Petunia axillaris HOM05D005991 ORTHO05D007408 1.2e-72 277.3 256 63.3
FAN07G2713 Fragaria x ananassa HOM05D005991 ORTHO05D007408 2.0e-72 276.6 277 60.6
QL06p013384 Quercus lobata HOM05D005991 ORTHO05D007408 3.4e-72 275.8 255 64.3
Manes.03G209000 Manihot esculenta HOM05D005991 ORTHO05D007408 4.4e-72 275.4 315 54.6
Phvul.003G118700 Phaseolus vulgaris HOM05D005991 ORTHO05D007408 5.8e-72 275.0 254 63.4
Sed0009947 Sechium edule HOM05D005991 ORTHO05D007408 9.9e-72 274.2 249 61.8
Atru.chr4.3094 Acer truncatum HOM05D005991 ORTHO05D007408 1.3e-71 273.9 229 67.7
ClCG06G004330 Citrullus lanatus HOM05D005991 ORTHO05D007408 2.9e-71 272.7 255 61.2
TWI53G1476 Tripterygium wilfordii HOM05D005991 ORTHO05D007408 4.9e-71 271.9 237 67.5
Potri.010G151300 Populus trichocarpa HOM05D005991 ORTHO05D007408 6.4e-71 271.6 226 67.3
TWI09G0093 Tripterygium wilfordii HOM05D005991 ORTHO05D007408 8.4e-71 271.2 234 66.7
Cc10_g13510 Coffea canephora HOM05D005991 ORTHO05D007408 1.4e-70 270.4 256 61.7
TWI73G0156 Tripterygium wilfordii HOM05D005991 ORTHO05D007408 1.4e-70 270.4 238 68.5
Glyma.17G037800 Glycine max HOM05D005991 ORTHO05D007408 7.1e-70 268.1 254 63.0
Lsat_1_v5_gn_4_27741 Lactuca sativa HOM05D005991 ORTHO05D007408 7.1e-70 268.1 241 64.3
arahy.Tifrunner.gnm1.ann1.ELD4MI Arachis hypogaea HOM05D005991 ORTHO05D007408 1.7e-68 263.5 251 62.5
HanXRQChr16g0526201 Helianthus annuus HOM05D005991 ORTHO05D007408 1.7e-68 263.5 239 64.0
ECA234G0222 Erigeron canadensis HOM05D005991 ORTHO05D007408 1.5e-67 260.4 264 60.2
arahy.Tifrunner.gnm1.ann1.5JMV2K Arachis hypogaea HOM05D005991 ORTHO05D007408 1.9e-67 260.0 249 62.7
Cc00_g31090 Coffea canephora HOM05D005991 ORTHO05D007408 2.5e-67 259.6 257 60.3
Ciclev10005452m.g Citrus clementina HOM05D005991 ORTHO05D007408 4.3e-67 258.8 308 54.9
CANSAT78G1707 Cannabis sativa HOM05D005991 ORTHO05D007408 1.3e-66 257.3 246 61.4
Thecc.04G307900 Theobroma cacao HOM05D005991 ORTHO05D007408 4.8e-66 255.4 306 53.3
Gohir.A02G056400 Gossypium hirsutum HOM05D005991 ORTHO05D007408 1.8e-65 253.4 270 56.3
Os01g0328500 Oryza sativa ssp. japonica HOM05D005991 ORTHO05D007408 3.1e-65 252.7 254 56.7
Ah.11g042100 Amaranthus hybridus HOM05D005991 ORTHO05D007408 4.0e-65 252.3 253 59.7
CiPaw.01G133100 Carya illinoinensis HOM05D005991 ORTHO05D007408 4.0e-65 252.3 187 78.1
Gorai.005G069300 Gossypium raimondii HOM05D005991 ORTHO05D007408 4.0e-65 252.3 270 55.9
Cpa.g.sc146.66 Carica papaya HOM05D005991 ORTHO05D007408 5.3e-65 251.9 225 65.8
Gohir.D02G061600 Gossypium hirsutum HOM05D005991 ORTHO05D007408 6.9e-65 251.5 270 55.9
MD16G1145900 Malus domestica HOM05D005991 ORTHO05D007408 3.4e-64 249.2 226 64.6
Duzib151G0057 Durio zibethinus HOM05D005991 ORTHO05D007408 4.9e-63 245.4 323 49.5
HPP92_017296 Vanilla planifolia HOM05D005991 ORTHO05D007408 1.9e-62 243.4 253 58.1
THA.LOC104827106 Tarenaya hassleriana HOM05D005991 ORTHO05D007408 3.2e-62 242.7 226 62.4
Zm00001eb131050 Zea mays HOM05D005991 ORTHO05D007408 2.1e-61 240.0 238 58.8
PSO017G0870 Papaver somniferum HOM05D005991 ORTHO05D007408 7.9e-61 238.0 249 57.8
arahy.Tifrunner.gnm1.ann1.KWD76U Arachis hypogaea HOM05D005991 ORTHO05D007408 8.7e-60 234.6 249 57.0
ATR0693G149 Amborella trichopoda HOM05D005991 ORTHO05D007408 1.1e-59 234.2 249 57.0
Zm00001eb340570 Zea mays HOM05D005991 ORTHO05D007408 5.6e-59 231.9 215 62.8
PSO675G8194 Papaver somniferum HOM05D005991 ORTHO05D007408 7.4e-59 231.5 249 56.6
Sp2g19950 Schrenkiella parvula HOM05D005991 ORTHO05D007408 1.2e-56 224.2 223 59.2
Aa31LG11G8380 Aethionema arabicum HOM05D005991 ORTHO05D007408 2.0e-56 223.4 224 59.4
BcaNung02118 Brassica carinata HOM05D005991 ORTHO05D007408 4.5e-56 222.2 220 60.9
C07p40040 Brassica napus HOM05D005991 ORTHO05D007408 4.5e-56 222.2 220 60.9
BcaB04g19640 Brassica carinata HOM05D005991 ORTHO05D007408 5.8e-56 221.9 241 56.0
A09p05050 Brassica napus HOM05D005991 ORTHO05D007408 1.0e-55 221.1 241 56.4
BolC7t44538H Brassica oleracea HOM05D005991 ORTHO05D007408 1.0e-55 221.1 220 60.9
BraA09t36144Z Brassica rapa HOM05D005991 ORTHO05D007408 1.0e-55 221.1 241 56.4
Sp6g09550 Schrenkiella parvula HOM05D005991 ORTHO05D007408 1.7e-55 220.3 242 55.8
COL.COLO4_34551 Corchorus olitorius HOM05D005991 ORTHO05D007408 6.5e-55 218.4 168 75.0
A06p38170 Brassica napus HOM05D005991 ORTHO05D007408 1.4e-54 217.2 220 59.5
AUR62037721 Chenopodium quinoa HOM05D005991 ORTHO05D007408 1.4e-54 217.2 253 53.4
BraA06t26732Z Brassica rapa HOM05D005991 ORTHO05D007408 1.9e-54 216.9 220 59.5
C09p05460 Brassica napus HOM05D005991 ORTHO05D007408 2.5e-54 216.5 238 56.3
AUR62020284 Chenopodium quinoa HOM05D005991 ORTHO05D007408 2.5e-54 216.5 253 52.6
AL6G41020 Arabidopsis lyrata HOM05D005991 ORTHO05D007408 9.3e-54 214.5 224 57.1
Carub.0020s0004 Capsella rubella HOM05D005991 ORTHO05D007408 9.3e-54 214.5 223 57.0
CARHR185530 Cardamine hirsuta HOM05D005991 ORTHO05D007408 1.6e-53 213.8 228 56.1
AT5G30490 Arabidopsis thaliana HOM05D005991 ORTHO05D007408 2.1e-53 213.4 224 56.7
BcaC04g23714 Brassica carinata HOM05D005991 ORTHO05D007408 3.5e-53 212.6 238 55.9
BolC9t53475H Brassica oleracea HOM05D005991 ORTHO05D007408 7.4e-51 204.9 266 51.1
Thhalv10004825m.g Eutrema salsugineum HOM05D005991 ORTHO05D007408 1.1e-49 201.1 227 52.9
BcaC06g30693 Brassica carinata HOM05D005991 ORTHO05D007408 2.1e-45 186.8 239 49.4
SEGI_07358 Sequoiadendron giganteum HOM05D005991 ORTHO05D007408 3.0e-44 183.0 252 46.8
PGR119G0116 Punica granatum HOM05D005991 ORTHO05D007408 1.1e-43 181.0 124 76.6
CSS0020858 Camellia sinensis var. sinensis HOM05D005991 ORTHO05D007408 3.7e-42 176.0 126 76.2
CDE05G0304 Ceratophyllum demersum HOM05D005991 ORTHO05D007408 1.4e-41 174.1 166 62.0
Mapoly0030s0047 Marchantia polymorpha HOM05D005991 ORTHO05D007408 2.8e-34 149.8 265 39.2
arahy.Tifrunner.gnm1.ann1.FWR109 Arachis hypogaea HOM05D005991 ORTHO05D007408 2.9e-31 139.8 222 45.5
Actinidia31584 Actinidia chinensis HOM05D005991 ORTHO05D007408 2.0e-27 127.1 217 44.2
Pp3c5_15500 Physcomitrium patens HOM05D005991 ORTHO05D007408 5.7e-27 125.6 257 37.0
Cre14.g632600 Chlamydomonas reinhardtii HOM05D005991 ORTHO05D007408 7.4e-27 125.2 280 33.9
SMO203G0019 Selaginella moellendorffii HOM05D005991 ORTHO05D007408 5.3e-25 119.0 232 38.8
AagrBONN_evm.TU.Sc2ySwM_117.1275 Anthoceros agrestis HOM05D005991 ORTHO05D007408 2.0e-24 117.1 142 52.8
CBR_g56129 Chara braunii HOM05D005991 ORTHO05D007408 1.3e-23 114.4 128 50.0
GSVIVG01017610001 Vitis vinifera HOM05D005991 ORTHO05D007408 1.7e-18 97.4 133 51.1
Sabra10G0116500 Salix brachista HOM05D005991 ORTHO05D007408 2.9e-15 86.7 106 47.2
MCO08G234 Micromonas commoda HOM05D005991 ORTHO05D007408 7.2e-14 82.0 187 35.8
GSVIVG01017622001 Vitis vinifera HOM05D005991 ORTHO05D007408 2.6e-11 73.6 62 58.1
PRCOL_00003370 Prasinoderma coloniale HOM05D005991 ORTHO05D007408 4.4e-11 72.8 148 37.8
GSVIVG01017621001 Vitis vinifera HOM05D005991 ORTHO05D007408 6.3e-10 68.9 99 50.5
AL1G65220 Arabidopsis lyrata HOM05D005991 ORTHO05D007408 7.7e-08 62.0 62 61.3
TAR381G1490 Trochodendron aralioides HOM05D005991 ORTHO05D007408 4.2e-06 56.2 47 68.1


User provided reference genes

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