Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv05077 Davidia involucrata HOM05D002031 ORTHO05D002143 6.2e-88 327.4 161 100.0
Dinv38874 Davidia involucrata HOM05D002031 ORTHO05D002143 1.0e-37 160.6 87 90.8
CSS0022416 Camellia sinensis var. sinensis HOM05D002031 ORTHO05D002143 3.5e-35 152.1 87 85.1
Lj8A212T64 Lonicera japonica HOM05D002031 ORTHO05D002143 9.7e-33 144.1 87 79.3
Cpa.g.sc1603.1 Carica papaya HOM05D002031 ORTHO05D002143 2.2e-32 142.9 87 81.6
TAR374G0371 Trochodendron aralioides HOM05D002031 ORTHO05D002143 2.8e-32 142.5 87 79.3
MBI16_g36972_MAGBIO Magnolia biondii HOM05D002031 ORTHO05D002143 3.1e-31 139.0 87 78.2
GSVIVG01031142001 Vitis vinifera HOM05D002031 ORTHO05D002143 3.1e-31 139.0 87 80.5
Actinidia07331 Actinidia chinensis HOM05D002031 ORTHO05D002143 4.1e-31 138.7 87 77.0
ATR0733G058 Amborella trichopoda HOM05D002031 ORTHO05D002143 4.1e-31 138.7 87 77.0
DCAR_008535 Daucus carota HOM05D002031 ORTHO05D002143 6.9e-31 137.9 87 74.7
Eucgr.D01778 Eucalyptus grandis HOM05D002031 ORTHO05D002143 1.5e-30 136.7 87 79.3
Migut.N02466 Erythranthe guttata HOM05D002031 ORTHO05D002143 2.6e-30 136.0 87 72.4
Eucgr.B03733 Eucalyptus grandis HOM05D002031 ORTHO05D002143 2.6e-30 136.0 87 77.0
Rhsim01G0060100 Rhododendron simsii HOM05D002031 ORTHO05D002143 2.6e-30 136.0 87 77.0
Lsat_1_v5_gn_6_11741 Lactuca sativa HOM05D002031 ORTHO05D002143 3.4e-30 135.6 87 74.7
Sopen08g030190 Solanum pennellii HOM05D002031 ORTHO05D002143 5.9e-30 134.8 87 75.9
PGSC0003DMG400012166 Solanum tuberosum HOM05D002031 ORTHO05D002143 5.9e-30 134.8 87 75.9
vmacro07734 Vaccinium macrocarpon HOM05D002031 ORTHO05D002143 1.0e-29 134.0 87 74.7
Nitab4.5_0002564g0040 Nicotiana tabacum HOM05D002031 ORTHO05D002143 1.3e-29 133.7 87 74.7
CDE01G0811 Ceratophyllum demersum HOM05D002031 ORTHO05D002143 1.7e-29 133.3 135 54.1
HanXRQChr07g0188771 Helianthus annuus HOM05D002031 ORTHO05D002143 1.7e-29 133.3 87 73.6
Nitab4.5_0000223g0060 Nicotiana tabacum HOM05D002031 ORTHO05D002143 1.7e-29 133.3 86 74.4
Peaxi162Scf00074g01326 Petunia axillaris HOM05D002031 ORTHO05D002143 1.7e-29 133.3 87 73.6
CAN.G532.55 Capsicum annuum HOM05D002031 ORTHO05D002143 2.2e-29 132.9 87 72.4
Solyc08g081900.4 Solanum lycopersicum HOM05D002031 ORTHO05D002143 2.2e-29 132.9 87 74.7
ECA233G2686 Erigeron canadensis HOM05D002031 ORTHO05D002143 2.9e-29 132.5 87 73.6
Manes.02G013600 Manihot esculenta HOM05D002031 ORTHO05D002143 2.9e-29 132.5 87 74.7
Nn1g02857 Nelumbo nucifera HOM05D002031 ORTHO05D002143 2.9e-29 132.5 87 77.0
Sc16g0001710 Simmondsia chinensis HOM05D002031 ORTHO05D002143 5.0e-29 131.7 87 71.3
EL10Ac4g07824 Beta vulgaris HOM05D002031 ORTHO05D002143 6.5e-29 131.3 87 71.3
Cc08_g15620 Coffea canephora HOM05D002031 ORTHO05D002143 8.5e-29 131.0 85 72.9
Ciclev10000440m.g Citrus clementina HOM05D002031 ORTHO05D002143 1.4e-28 130.2 87 75.9
PGR042G2447 Punica granatum HOM05D002031 ORTHO05D002143 1.4e-28 130.2 87 75.9
Aqoxy7G01542 Aquilegia oxysepala HOM05D002031 ORTHO05D002143 1.9e-28 129.8 87 74.7
MSTRG.17692 Avicennia marina HOM05D002031 ORTHO05D002143 1.9e-28 129.8 87 71.3
CANSAT21G0572 Cannabis sativa HOM05D002031 ORTHO05D002143 1.9e-28 129.8 87 74.7
Hund01994 Selenicereus undatus HOM05D002031 ORTHO05D002143 1.9e-28 129.8 87 70.1
Manes.01G048100 Manihot esculenta HOM05D002031 ORTHO05D002143 2.5e-28 129.4 87 71.3
RcHm_v2.0_Chr1g0329761 Rosa chinensis HOM05D002031 ORTHO05D002143 2.5e-28 129.4 87 70.1
TWI38G1341 Tripterygium wilfordii HOM05D002031 ORTHO05D002143 4.2e-28 128.6 87 74.7
RcHm_v2.0_Chr7g0195701 Rosa chinensis HOM05D002031 ORTHO05D002143 5.5e-28 128.3 135 52.6
Duzib068G0029 Durio zibethinus HOM05D002031 ORTHO05D002143 9.3e-28 127.5 87 74.7
FvH4_5g03810 Fragaria vesca HOM05D002031 ORTHO05D002143 1.6e-27 126.7 135 51.9
FAN08G2579 Fragaria x ananassa HOM05D002031 ORTHO05D002143 1.6e-27 126.7 135 51.9
FAN13G0607 Fragaria x ananassa HOM05D002031 ORTHO05D002143 1.6e-27 126.7 135 51.9
FAN13G1744 Fragaria x ananassa HOM05D002031 ORTHO05D002143 1.6e-27 126.7 135 51.9
Os09g0515500 Oryza sativa ssp. japonica HOM05D002031 ORTHO05D002143 1.6e-27 126.7 87 69.0
CiPaw.12G086300 Carya illinoinensis HOM05D002031 ORTHO05D002143 2.1e-27 126.3 87 75.9
Zm00001eb081790 Zea mays HOM05D002031 ORTHO05D002143 2.7e-27 125.9 87 69.0
MELO3C016316.2 Cucumis melo HOM05D002031 ORTHO05D002143 3.6e-27 125.6 87 72.4
CsaV3_4G006340 Cucumis sativus L. HOM05D002031 ORTHO05D002143 3.6e-27 125.6 87 71.3
FAN18G4425 Fragaria x ananassa HOM05D002031 ORTHO05D002143 4.6e-27 125.2 135 51.1
Lalb_Chr16g0385451 Lupinus albus HOM05D002031 ORTHO05D002143 4.6e-27 125.2 87 71.3
QL02p031758 Quercus lobata HOM05D002031 ORTHO05D002143 4.6e-27 125.2 86 73.3
AL6G45350 Arabidopsis lyrata HOM05D002031 ORTHO05D002143 6.1e-27 124.8 87 69.0
AT4G11160 Arabidopsis thaliana HOM05D002031 ORTHO05D002143 7.9e-27 124.4 87 69.0
Sp6g06250 Schrenkiella parvula HOM05D002031 ORTHO05D002143 7.9e-27 124.4 87 67.8
Thecc.02G087800 Theobroma cacao HOM05D002031 ORTHO05D002143 7.9e-27 124.4 87 71.3
AUR62015765 Chenopodium quinoa HOM05D002031 ORTHO05D002143 1.0e-26 124.0 87 66.7
AUR62020448 Chenopodium quinoa HOM05D002031 ORTHO05D002143 1.0e-26 124.0 87 66.7
Sed0022859 Sechium edule HOM05D002031 ORTHO05D002143 1.0e-26 124.0 87 72.4
arahy.Tifrunner.gnm1.ann1.6G4FCY Arachis hypogaea HOM05D002031 ORTHO05D002143 1.3e-26 123.6 87 69.0
CARHR255410 Cardamine hirsuta HOM05D002031 ORTHO05D002143 1.3e-26 123.6 87 67.8
ClCG07G014810 Citrullus lanatus HOM05D002031 ORTHO05D002143 1.3e-26 123.6 87 71.3
Thhalv10028461m.g Eutrema salsugineum HOM05D002031 ORTHO05D002143 1.3e-26 123.6 87 66.7
FvH4_5g26110 Fragaria vesca HOM05D002031 ORTHO05D002143 1.3e-26 123.6 135 51.1
Sed0025340 Sechium edule HOM05D002031 ORTHO05D002143 1.3e-26 123.6 87 71.3
SEGI_10904 Sequoiadendron giganteum HOM05D002031 ORTHO05D002143 1.3e-26 123.6 87 67.8
CiPaw.11G125500 Carya illinoinensis HOM05D002031 ORTHO05D002143 1.8e-26 123.2 87 73.6
BcaB05g23856 Brassica carinata HOM05D002031 ORTHO05D002143 2.3e-26 122.9 87 66.7
BcaC03g16365 Brassica carinata HOM05D002031 ORTHO05D002143 2.3e-26 122.9 87 66.7
A02p26340 Brassica napus HOM05D002031 ORTHO05D002143 2.3e-26 122.9 87 66.7
C02p41880 Brassica napus HOM05D002031 ORTHO05D002143 2.3e-26 122.9 87 66.7
BolC2t10219H Brassica oleracea HOM05D002031 ORTHO05D002143 2.3e-26 122.9 87 66.7
BraA02t07636Z Brassica rapa HOM05D002031 ORTHO05D002143 2.3e-26 122.9 87 66.7
Gohir.A12G231600 Gossypium hirsutum HOM05D002031 ORTHO05D002143 2.3e-26 122.9 87 71.3
Gohir.D12G235475 Gossypium hirsutum HOM05D002031 ORTHO05D002143 2.3e-26 122.9 87 71.3
Gorai.008G251900 Gossypium raimondii HOM05D002031 ORTHO05D002143 2.3e-26 122.9 87 71.3
Lj1g0008760 Lotus japonicus HOM05D002031 ORTHO05D002143 2.3e-26 122.9 87 70.1
Phvul.001G220900 Phaseolus vulgaris HOM05D002031 ORTHO05D002143 2.3e-26 122.9 87 69.0
VMungo1383G2561 Vigna mungo HOM05D002031 ORTHO05D002143 2.3e-26 122.9 87 67.8
arahy.Tifrunner.gnm1.ann1.4T2FL2 Arachis hypogaea HOM05D002031 ORTHO05D002143 3.0e-26 122.5 87 67.8
COL.COLO4_21733 Corchorus olitorius HOM05D002031 ORTHO05D002143 3.0e-26 122.5 87 70.1
FAN13G2640 Fragaria x ananassa HOM05D002031 ORTHO05D002143 3.0e-26 122.5 135 51.1
BcaC01g04636 Brassica carinata HOM05D002031 ORTHO05D002143 3.9e-26 122.1 87 69.0
C03p35390 Brassica napus HOM05D002031 ORTHO05D002143 3.9e-26 122.1 87 69.0
BolC3t15852H Brassica oleracea HOM05D002031 ORTHO05D002143 3.9e-26 122.1 87 69.0
Glyma.19G224000 Glycine max HOM05D002031 ORTHO05D002143 3.9e-26 122.1 87 69.0
Medtr5g032140 Medicago truncatula HOM05D002031 ORTHO05D002143 3.9e-26 122.1 87 67.8
Psat2g083720 Pisum sativum HOM05D002031 ORTHO05D002143 3.9e-26 122.1 87 67.8
SGA_v2.0_scaffold295G47498 Striga asiatica HOM05D002031 ORTHO05D002143 5.1e-26 121.7 87 64.4
FAN08G0699 Fragaria x ananassa HOM05D002031 ORTHO05D002143 8.8e-26 120.9 132 50.8
arahy.Tifrunner.gnm1.ann1.JQUJ9N Arachis hypogaea HOM05D002031 ORTHO05D002143 1.5e-25 120.2 87 66.7
arahy.Tifrunner.gnm1.ann1.T9IDSP Arachis hypogaea HOM05D002031 ORTHO05D002143 1.5e-25 120.2 87 66.7
Carub.0006s2999 Capsella rubella HOM05D002031 ORTHO05D002143 1.5e-25 120.2 87 65.5
Ca_22709_v3 Cicer arietinum L. HOM05D002031 ORTHO05D002143 1.9e-25 119.8 87 67.8
Haze_08696 Corylus avellana HOM05D002031 ORTHO05D002143 1.9e-25 119.8 87 70.1
unitig_22.g5671 Utricularia gibba HOM05D002031 ORTHO05D002143 1.9e-25 119.8 87 66.7
MD06G1099300 Malus domestica HOM05D002031 ORTHO05D002143 2.5e-25 119.4 87 69.0
BcaB01g02708 Brassica carinata HOM05D002031 ORTHO05D002143 3.3e-25 119.0 87 66.7
Glyma.03G227100 Glycine max HOM05D002031 ORTHO05D002143 3.3e-25 119.0 87 67.8
THA.LOC104813032 Tarenaya hassleriana HOM05D002031 ORTHO05D002143 3.3e-25 119.0 87 65.5
MD14G1119100 Malus domestica HOM05D002031 ORTHO05D002143 4.3e-25 118.6 87 69.0
Prupe.5G113200 Prunus persica HOM05D002031 ORTHO05D002143 7.4e-25 117.9 87 67.8
FAN18G3253 Fragaria x ananassa HOM05D002031 ORTHO05D002143 6.3e-24 114.8 82 65.9
Sabra01G0071200 Salix brachista HOM05D002031 ORTHO05D002143 6.3e-24 114.8 86 68.6
PSO135G0409 Papaver somniferum HOM05D002031 ORTHO05D002143 1.1e-23 114.0 87 67.8
PSO384G2610 Papaver somniferum HOM05D002031 ORTHO05D002143 1.1e-23 114.0 87 67.8
Aa31LG9G11010 Aethionema arabicum HOM05D002031 ORTHO05D002143 1.4e-23 113.6 87 63.2
Potri.001G095500 Populus trichocarpa HOM05D002031 ORTHO05D002143 3.1e-23 112.5 86 67.4
TPR.G33212 Trifolium pratense HOM05D002031 ORTHO05D002143 5.3e-23 111.7 87 60.9
HPP92_017626 Vanilla planifolia HOM05D002031 ORTHO05D002143 6.9e-23 111.3 88 60.2
A03p29300 Brassica napus HOM05D002031 ORTHO05D002143 1.5e-22 110.2 81 65.4
BraA03t12126Z Brassica rapa HOM05D002031 ORTHO05D002143 1.5e-22 110.2 81 65.4
Mapoly0002s0117 Marchantia polymorpha HOM05D002031 ORTHO05D002143 5.9e-22 108.2 87 54.0
Pp3c6_1920 Physcomitrium patens HOM05D002031 ORTHO05D002143 1.0e-18 97.4 87 50.6
SMO147G0248 Selaginella moellendorffii HOM05D002031 ORTHO05D002143 2.0e-17 93.2 87 49.4
CBR_g12031 Chara braunii HOM05D002031 ORTHO05D002143 1.7e-16 90.1 85 47.1
Dinv11143 Davidia involucrata HOM05D055780 ORTHO05D009397 3.2e-12 75.9 47 83.0
Dinv11901 Davidia involucrata HOM05D007552 ORTHO05D009397 3.1e-07 59.3 39 76.9


User provided reference genes

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