Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv05022 Davidia involucrata HOM05D007065 ORTHO05D008960 1.9e-87 325.9 173 100.0
Dinv32064 Davidia involucrata HOM05D007065 ORTHO05D008960 1.9e-47 193.0 146 74.7
Actinidia19434 Actinidia chinensis HOM05D007065 ORTHO05D008960 1.4e-45 186.8 174 64.4
CiPaw.13G009300 Carya illinoinensis HOM05D007065 ORTHO05D008960 1.8e-45 186.4 177 66.1
Actinidia06280 Actinidia chinensis HOM05D007065 ORTHO05D008960 1.5e-44 183.3 176 64.8
QL04p012215 Quercus lobata HOM05D007065 ORTHO05D008960 2.9e-43 179.1 172 62.2
Rhsim07G0061200 Rhododendron simsii HOM05D007065 ORTHO05D008960 3.8e-43 178.7 187 62.0
Nn2g15140 Nelumbo nucifera HOM05D007065 ORTHO05D008960 3.2e-42 175.6 173 59.5
MD07G1026200 Malus domestica HOM05D007065 ORTHO05D008960 5.5e-42 174.9 175 58.9
GSVIVG01001464001 Vitis vinifera HOM05D007065 ORTHO05D008960 3.9e-40 168.7 177 59.9
MD02G1298000 Malus domestica HOM05D007065 ORTHO05D008960 5.1e-40 168.3 170 58.8
PSO339G2565 Papaver somniferum HOM05D007065 ORTHO05D008960 3.3e-39 165.6 169 60.4
MELO3C005114.2 Cucumis melo HOM05D007065 ORTHO05D008960 8.2e-38 161.0 178 56.7
CsaV3_5G024860 Cucumis sativus L. HOM05D007065 ORTHO05D008960 8.2e-38 161.0 176 56.8
Eucgr.G03272 Eucalyptus grandis HOM05D007065 ORTHO05D008960 1.1e-37 160.6 177 58.2
PSO384G3763 Papaver somniferum HOM05D007065 ORTHO05D008960 1.4e-37 160.2 169 59.8
Manes.04G064100 Manihot esculenta HOM05D007065 ORTHO05D008960 6.9e-37 157.9 180 55.6
Aqoxy1G00221 Aquilegia oxysepala HOM05D007065 ORTHO05D008960 5.9e-36 154.8 172 54.7
MBI13_g15309_MAGBIO Magnolia biondii HOM05D007065 ORTHO05D008960 1.3e-35 153.7 170 56.5
Psat5g211000 Pisum sativum HOM05D007065 ORTHO05D008960 1.7e-35 153.3 124 64.5
FvH4_7g02000 Fragaria vesca HOM05D007065 ORTHO05D008960 2.9e-35 152.5 165 56.4
Lalb_Chr04g0263741 Lupinus albus HOM05D007065 ORTHO05D008960 3.8e-35 152.1 171 53.2
MSTRG.17000 Avicennia marina HOM05D007065 ORTHO05D008960 8.5e-35 151.0 189 51.9
FAN01G0916 Fragaria x ananassa HOM05D007065 ORTHO05D008960 8.5e-35 151.0 165 56.4
MSTRG.20552 Avicennia marina HOM05D007065 ORTHO05D008960 1.9e-34 149.8 185 50.3
FAN06G0835 Fragaria x ananassa HOM05D007065 ORTHO05D008960 2.5e-34 149.4 168 54.2
ClCG01G007790 Citrullus lanatus HOM05D007065 ORTHO05D008960 4.2e-34 148.7 168 56.0
RcHm_v2.0_Chr1g0318991 Rosa chinensis HOM05D007065 ORTHO05D008960 4.2e-34 148.7 165 56.4
Phvul.005G034300 Phaseolus vulgaris HOM05D007065 ORTHO05D008960 6.1e-33 144.8 123 61.0
Lsat_1_v5_gn_1_99921 Lactuca sativa HOM05D007065 ORTHO05D008960 1.0e-32 144.1 172 50.6
Sopen01g035020 Solanum pennellii HOM05D007065 ORTHO05D008960 1.4e-32 143.7 176 50.6
Glyma.11G157140 Glycine max HOM05D007065 ORTHO05D008960 1.8e-32 143.3 123 61.0
Solyc01g088140.3 Solanum lycopersicum HOM05D007065 ORTHO05D008960 2.3e-32 142.9 176 50.6
PGSC0003DMG400006766 Solanum tuberosum HOM05D007065 ORTHO05D008960 2.3e-32 142.9 174 51.1
Lj3g0026300 Lotus japonicus HOM05D007065 ORTHO05D008960 6.7e-32 141.4 168 51.2
Nitab4.5_0000316g0330 Nicotiana tabacum HOM05D007065 ORTHO05D008960 6.7e-32 141.4 176 51.7
Migut.B01254 Erythranthe guttata HOM05D007065 ORTHO05D008960 1.5e-31 140.2 183 50.8
Cfa010837 Carpinus fangiana HOM05D007065 ORTHO05D008960 3.3e-31 139.0 154 57.8
PGR031G2384 Punica granatum HOM05D007065 ORTHO05D008960 7.4e-31 137.9 174 51.1
EL10Ac2g02888 Beta vulgaris HOM05D007065 ORTHO05D008960 1.3e-30 137.1 178 50.0
SGA_v2.0_scaffold4G02459 Striga asiatica HOM05D007065 ORTHO05D008960 2.2e-30 136.3 186 49.5
Sc10g0004180 Simmondsia chinensis HOM05D007065 ORTHO05D008960 2.8e-30 136.0 115 64.3
Cc02_g30050 Coffea canephora HOM05D007065 ORTHO05D008960 4.8e-30 135.2 195 48.7
Hma1.2p1_0579F.1_g182650 Hydrangea macrophylla HOM05D007065 ORTHO05D008960 4.8e-30 135.2 151 60.9
Medtr3g436080 Medicago truncatula HOM05D007065 ORTHO05D008960 4.8e-30 135.2 166 50.6
vmacro13712 Vaccinium macrocarpon HOM05D007065 ORTHO05D008960 4.8e-30 135.2 156 55.8
Ca_14187_v3 Cicer arietinum L. HOM05D007065 ORTHO05D008960 1.4e-29 133.7 170 51.8
Peaxi162Scf01115g00110 Petunia axillaris HOM05D007065 ORTHO05D008960 2.4e-29 132.9 178 51.1
Sed0022285 Sechium edule HOM05D007065 ORTHO05D008960 3.1e-29 132.5 176 49.4
arahy.Tifrunner.gnm1.ann1.D1ESAM Arachis hypogaea HOM05D007065 ORTHO05D008960 4.1e-29 132.1 160 50.6
ATR1134G106 Amborella trichopoda HOM05D007065 ORTHO05D008960 7.0e-29 131.3 172 51.7
Duzib128G1478 Durio zibethinus HOM05D007065 ORTHO05D008960 7.0e-29 131.3 177 50.3
arahy.Tifrunner.gnm1.ann1.ZUZF0V Arachis hypogaea HOM05D007065 ORTHO05D008960 9.1e-29 131.0 152 52.6
COL.COLO4_19334 Corchorus olitorius HOM05D002616 ORTHO05D003192 9.1e-29 131.0 114 64.9
Potri.003G203900 Populus trichocarpa HOM05D007065 ORTHO05D008960 9.1e-29 131.0 185 51.9
TAR636G1654 Trochodendron aralioides HOM05D007065 ORTHO05D008960 1.2e-28 130.6 98 73.5
Aa31LG11G7640 Aethionema arabicum HOM05D007065 ORTHO05D008960 2.0e-28 129.8 175 46.3
Oeu027356.1 Olea europaea HOM05D007065 ORTHO05D008960 2.6e-28 129.4 107 64.5
AUR62037250 Chenopodium quinoa HOM05D007065 ORTHO05D008960 3.5e-28 129.0 133 56.4
Nitab4.5_0016351g0020 Nicotiana tabacum HOM05D007065 ORTHO05D008960 3.5e-28 129.0 107 65.4
ECA248G1453 Erigeron canadensis HOM05D007065 ORTHO05D008960 5.9e-28 128.3 169 49.1
unitig_22.g5430 Utricularia gibba HOM05D007065 ORTHO05D008960 7.7e-28 127.9 181 47.5
Hund13309 Selenicereus undatus HOM05D007065 ORTHO05D008960 1.7e-27 126.7 105 64.8
Potri.001G020700 Populus trichocarpa HOM05D007065 ORTHO05D008960 2.2e-27 126.3 173 50.9
Duzib114G0680 Durio zibethinus HOM05D007065 ORTHO05D008960 5.0e-27 125.2 179 49.2
Cpa.g.sc197.20 Carica papaya HOM05D007065 ORTHO05D008960 8.5e-27 124.4 165 51.5
AUR62030541 Chenopodium quinoa HOM05D007065 ORTHO05D008960 8.5e-27 124.4 110 60.9
THA.LOC104819111 Tarenaya hassleriana HOM05D007065 ORTHO05D008960 8.5e-27 124.4 168 49.4
HanXRQChr01g0020971 Helianthus annuus HOM05D007065 ORTHO05D008960 1.9e-26 123.2 172 46.5
Peaxi162Scf01115g00011 Petunia axillaris HOM05D007065 ORTHO05D008960 1.9e-26 123.2 105 64.8
Thecc.10G002700 Theobroma cacao HOM05D007065 ORTHO05D008960 1.9e-26 123.2 175 49.1
FAN03G0341 Fragaria x ananassa HOM05D007065 ORTHO05D008960 3.2e-26 122.5 151 51.7
Sp6g30550 Schrenkiella parvula HOM05D007065 ORTHO05D008960 7.2e-26 121.3 171 50.9
BolC9t59205H Brassica oleracea HOM05D007065 ORTHO05D008960 1.6e-25 120.2 174 49.4
DCAR_022363 Daucus carota HOM05D007065 ORTHO05D008960 2.7e-25 119.4 173 49.7
A10p24790 Brassica napus HOM05D007065 ORTHO05D008960 4.7e-25 118.6 174 48.3
SalBow5G0133 Salvia bowleyana HOM05D007065 ORTHO05D008960 1.0e-24 117.5 164 48.2
C09p63610 Brassica napus HOM05D007065 ORTHO05D008960 2.3e-24 116.3 115 60.0
BraA10t44543Z Brassica rapa HOM05D007065 ORTHO05D008960 2.3e-24 116.3 171 48.0
CDE04G3117 Ceratophyllum demersum HOM05D007065 ORTHO05D008960 5.2e-24 115.2 172 45.3
VMungo1080G1068 Vigna mungo HOM05D007065 ORTHO05D008960 6.7e-24 114.8 101 60.4
Lj9P644T43 Lonicera japonica HOM05D007065 ORTHO05D008960 1.1e-23 114.0 92 69.6
Sabra01G0015300 Salix brachista HOM05D007065 ORTHO05D008960 1.1e-23 114.0 177 49.2
SalBow5G3075 Salvia bowleyana HOM05D007065 ORTHO05D008960 1.5e-23 113.6 162 47.5
CDE07G0125 Ceratophyllum demersum HOM05D007065 ORTHO05D008960 2.0e-23 113.2 168 45.2
HPP92_001654 Vanilla planifolia HOM05D007065 ORTHO05D008960 2.0e-23 113.2 185 43.8
Carub.0006s1163 Capsella rubella HOM05D007065 ORTHO05D008960 3.3e-23 112.5 171 45.6
AT5G13470 Arabidopsis thaliana HOM05D007065 ORTHO05D008960 5.7e-23 111.7 169 45.6
Oeu049459.1 Olea europaea HOM05D007065 ORTHO05D008960 5.7e-23 111.7 104 58.7
A02p01960 Brassica napus HOM05D007065 ORTHO05D008960 3.7e-22 109.0 171 46.8
Gohir.D13G013700 Gossypium hirsutum HOM05D007065 ORTHO05D008960 4.8e-22 108.6 99 60.6
BcaNung01150 Brassica carinata HOM05D007065 ORTHO05D008960 8.2e-22 107.8 173 46.2
TPR.G15470 Trifolium pratense HOM05D007065 ORTHO05D008960 8.2e-22 107.8 102 56.9
AL6G24090 Arabidopsis lyrata HOM05D007065 ORTHO05D008960 1.4e-21 107.1 173 45.7
Ah.12g065220 Amaranthus hybridus HOM05D007065 ORTHO05D008960 1.8e-21 106.7 153 43.8
C02p06180 Brassica napus HOM05D007065 ORTHO05D008960 5.3e-21 105.1 173 45.7
BolC2t06559H Brassica oleracea HOM05D007065 ORTHO05D008960 5.3e-21 105.1 173 45.7
CSS0014876 Camellia sinensis var. sinensis HOM05D000388 ORTHO05D000473 7.0e-21 104.8 81 70.4
Thecc.03G067800 Theobroma cacao HOM05D007065 ORTHO05D008960 2.0e-20 103.2 89 60.7
TWI09G1481 Tripterygium wilfordii HOM05D007065 ORTHO05D008960 2.0e-20 103.2 115 51.3
BraA02t05169Z Brassica rapa HOM05D007065 ORTHO05D008960 2.6e-20 102.8 171 45.0
CANSAT80G2361 Cannabis sativa HOM05D007065 ORTHO05D008960 5.9e-20 101.7 65 73.8
FAN28G1096 Fragaria x ananassa HOM05D007065 ORTHO05D008960 7.7e-20 101.3 79 67.1
BcaNung01886 Brassica carinata HOM05D007065 ORTHO05D002715 1.3e-19 100.5 171 43.9
Haze_03101 Corylus avellana HOM05D007065 ORTHO05D008960 8.5e-19 97.8 139 48.2
Thhalv10014938m.g Eutrema salsugineum HOM05D007065 ORTHO05D008960 1.5e-18 97.1 160 45.0
AagrBONN_evm.TU.Sc2ySwM_228.825 Anthoceros agrestis HOM05D007065 ORTHO05D008960 4.4e-15 85.5 169 42.0
Gohir.A13G012500 Gossypium hirsutum HOM05D007065 ORTHO05D008960 3.7e-14 82.4 93 55.9
Mapoly0014s0118 Marchantia polymorpha HOM05D007065 ORTHO05D008960 6.3e-14 81.6 168 41.1
Gorai.013G014700 Gossypium raimondii HOM05D007065 ORTHO05D008960 4.1e-13 79.0 93 54.8
Os01g0939400 Oryza sativa ssp. japonica HOM05D007065 ORTHO05D008960 5.9e-12 75.1 102 46.1
CBR_g4751 Chara braunii HOM05D007065 ORTHO05D008960 4.0e-08 62.4 85 47.1
Zm00001eb141670 Zea mays HOM05D007065 ORTHO05D008960 8.8e-08 61.2 70 50.0
TAR622G0888 Trochodendron aralioides HOM05D007065 ORTHO05D008960 2.2e-06 56.6 54 59.3


User provided reference genes

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