Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv05017 Davidia involucrata HOM05D015331 ORTHO05D000309 4.6e-70 267.7 128 100.0
Dinv12011 Davidia involucrata HOM05D015331 ORTHO05D000309 8.2e-35 150.6 105 73.3
Dinv26432 Davidia involucrata HOM05D001383 ORTHO05D000309 8.5e-24 114.0 86 65.1
Dinv41031 Davidia involucrata HOM05D001383 ORTHO05D000309 2.3e-21 105.9 82 62.2
Dinv14680 Davidia involucrata HOM05D008126 ORTHO05D000309 1.2e-14 83.6 90 50.0
Hma1.2p1_1382F.1_g279350 Hydrangea macrophylla HOM05D008126 ORTHO05D000309 3.0e-13 79.0 85 43.5
Dinv22727 Davidia involucrata HOM05D008126 ORTHO05D000309 9.8e-12 73.9 79 48.1
Rhsim11G0046300 Rhododendron simsii HOM05D001383 ORTHO05D000309 2.2e-11 72.8 94 38.3
Hma1.2p1_1051F.1_g252070 Hydrangea macrophylla HOM05D008126 ORTHO05D000309 2.4e-10 69.3 67 47.8
Atru.chr1.3458 Acer truncatum HOM05D001383 ORTHO05D000309 9.1e-10 67.4 67 44.8
QL08p000859 Quercus lobata HOM05D022142 ORTHO05D000309 9.1e-10 67.4 90 40.0
arahy.Tifrunner.gnm1.ann1.DG6XDV Arachis hypogaea HOM05D029393 ORTHO05D000309 5.9e-09 64.7 97 39.2
arahy.Tifrunner.gnm1.ann1.QSEK4V Arachis hypogaea HOM05D029393 ORTHO05D000309 5.9e-09 64.7 97 39.2
Dinv03416 Davidia involucrata HOM05D001383 ORTHO05D182500 7.7e-09 64.3 38 76.3
Dinv09469 Davidia involucrata HOM05D003061 ORTHO05D003427 7.7e-09 64.3 66 51.5
Dinv09832 Davidia involucrata HOM05D001383 ORTHO05D000309 1.7e-08 63.2 65 46.2
SGA_v2.0_scaffold364G49972 Striga asiatica HOM05D001383 ORTHO05D000309 2.2e-08 62.8 86 40.7
SGA_v2.0_scaffold45G16985 Striga asiatica HOM05D001383 ORTHO05D000309 2.2e-08 62.8 82 41.5
SGA_v2.0_scaffold14G07096 Striga asiatica HOM05D001383 ORTHO05D000309 5.0e-08 61.6 85 37.6
SGA_v2.0_scaffold28G12041 Striga asiatica HOM05D001383 ORTHO05D000309 5.0e-08 61.6 116 32.8
Atru.chr9.1876 Acer truncatum HOM05D001383 ORTHO05D000309 6.5e-08 61.2 70 40.0
Prupe.7G055500 Prunus persica HOM05D001383 ORTHO05D000309 6.5e-08 61.2 71 39.4
Actinidia16536 Actinidia chinensis HOM05D001383 ORTHO05D000309 8.5e-08 60.8 74 39.2
Medtr2g017540 Medicago truncatula HOM05D001383 ORTHO05D000309 8.5e-08 60.8 88 39.8
Hma1.2p1_0257F.1_g103490 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 1.9e-07 59.7 86 39.5
SGA_v2.0_scaffold123G33399 Striga asiatica HOM05D001383 ORTHO05D000309 1.9e-07 59.7 116 31.9
Gohir.A01G209050 Gossypium hirsutum HOM05D001383 ORTHO05D000309 3.2e-07 58.9 75 46.7
Prupe.8G093700 Prunus persica HOM05D001383 ORTHO05D000309 4.2e-07 58.5 81 38.3
SGA_v2.0_scaffold14G06948 Striga asiatica HOM05D001383 ORTHO05D000309 4.2e-07 58.5 79 39.2
SGA_v2.0_scaffold283G46984 Striga asiatica HOM05D001383 ORTHO05D000309 4.2e-07 58.5 89 38.2
Hma1.2p1_0012F.1_g007535 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 5.5e-07 58.2 82 40.2
SGA_v2.0_scaffold22G09703 Striga asiatica HOM05D001383 ORTHO05D000309 5.5e-07 58.2 95 33.7
SGA_v2.0_scaffold55G19817 Striga asiatica HOM05D001383 ORTHO05D000309 5.5e-07 58.2 79 40.5
vmacro15909 Vaccinium macrocarpon HOM05D001383 ORTHO05D000309 5.5e-07 58.2 63 42.9
Peaxi162Scf00795g00012 Petunia axillaris HOM05D001383 ORTHO05D000309 7.2e-07 57.8 68 39.7
Hma1.2p1_0230F.1_g097240 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 9.4e-07 57.4 80 40.0
SGA_v2.0_scaffold472G52098 Striga asiatica HOM05D001383 ORTHO05D000309 9.4e-07 57.4 95 33.7
Medtr3g045410 Medicago truncatula HOM05D001383 ORTHO05D000309 1.2e-06 57.0 65 40.0
SGA_v2.0_scaffold157G37340 Striga asiatica HOM05D001383 ORTHO05D000309 1.2e-06 57.0 102 31.4
Gohir.A10G090350 Gossypium hirsutum HOM05D001383 ORTHO05D000309 1.6e-06 56.6 52 48.1
Hma1.2p1_1041F.1_g251030 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 1.6e-06 56.6 77 42.9
Peaxi162Scf00171g00022 Petunia axillaris HOM05D001383 ORTHO05D000309 1.6e-06 56.6 85 34.1
Peaxi162Scf00225g00101 Petunia axillaris HOM05D001383 ORTHO05D000309 1.6e-06 56.6 85 34.1
Peaxi162Scf00699g00025 Petunia axillaris HOM05D001383 ORTHO05D000309 1.6e-06 56.6 85 34.1
Peaxi162Scf00990g00010 Petunia axillaris HOM05D001383 ORTHO05D000309 1.6e-06 56.6 74 36.5
SGA_v2.0_scaffold5G03034 Striga asiatica HOM05D001383 ORTHO05D000309 1.6e-06 56.6 95 32.6
QL05p006666 Quercus lobata HOM05D015331 ORTHO05D026087 2.1e-06 56.2 76 40.8
QL08p000935 Quercus lobata HOM05D022142 ORTHO05D000309 2.1e-06 56.2 59 42.4
QL08p020605 Quercus lobata HOM05D015331 ORTHO05D026087 2.1e-06 56.2 76 40.8
SGA_v2.0_scaffold148G36478 Striga asiatica HOM05D001383 ORTHO05D000309 2.1e-06 56.2 66 40.9
SGA_v2.0_scaffold309G48181 Striga asiatica HOM05D001383 ORTHO05D000309 2.1e-06 56.2 102 37.3
SGA_v2.0_scaffold55G19721 Striga asiatica HOM05D001383 ORTHO05D000309 2.1e-06 56.2 102 37.3
SGA_v2.0_scaffold5G03007 Striga asiatica HOM05D001383 ORTHO05D000309 2.1e-06 56.2 102 37.3
DCAR_015227 Daucus carota HOM05D001383 ORTHO05D000309 2.7e-06 55.8 86 36.0
DCAR_027645 Daucus carota HOM05D001383 ORTHO05D000309 2.7e-06 55.8 86 36.0
Hma1.2p1_0785F.1_g217480 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 2.7e-06 55.8 67 43.3
Peaxi162Scf00075g00085 Petunia axillaris HOM05D001383 ORTHO05D000309 2.7e-06 55.8 44 47.7
Peaxi162Scf00187g01114 Petunia axillaris HOM05D001383 ORTHO05D000309 2.7e-06 55.8 72 41.7
SGA_v2.0_scaffold156G37257 Striga asiatica HOM05D035478 ORTHO05D000309 2.7e-06 55.8 90 36.7
Dinv05615 Davidia involucrata HOM05D001383 ORTHO05D000309 3.6e-06 55.5 67 38.8
Medtr2g008290 Medicago truncatula HOM05D001383 ORTHO05D000309 3.6e-06 55.5 90 36.7
Medtr5g021030 Medicago truncatula HOM05D001383 ORTHO05D000309 3.6e-06 55.5 90 36.7
Peaxi162Scf00465g00011 Petunia axillaris HOM05D001383 ORTHO05D000309 3.6e-06 55.5 76 34.2
Peaxi162Scf01316g00007 Petunia axillaris HOM05D001383 ORTHO05D000309 3.6e-06 55.5 76 34.2
QL05p017763 Quercus lobata HOM05D015331 ORTHO05D026087 3.6e-06 55.5 76 40.8
SGA_v2.0_scaffold14G07112 Striga asiatica HOM05D001383 ORTHO05D000309 3.6e-06 55.5 91 36.3
SGA_v2.0_scaffold43G16251 Striga asiatica HOM05D001383 ORTHO05D000309 3.6e-06 55.5 102 31.4
Peaxi162Scf00320g00217 Petunia axillaris HOM05D001383 ORTHO05D000309 4.7e-06 55.1 76 42.1
QL09p043658 Quercus lobata HOM05D001383 ORTHO05D000309 4.7e-06 55.1 62 43.5
SGA_v2.0_scaffold167G38437 Striga asiatica HOM05D001383 ORTHO05D000309 4.7e-06 55.1 93 31.2
COL.COLO4_06499 Corchorus olitorius HOM05D015200 ORTHO05D000309 6.1e-06 54.7 71 40.8
Peaxi162Scf00012g01429 Petunia axillaris HOM05D001383 ORTHO05D000309 6.1e-06 54.7 73 42.5
SGA_v2.0_scaffold185G40087 Striga asiatica HOM05D001383 ORTHO05D000309 6.1e-06 54.7 92 34.8
Migut.M00684 Erythranthe guttata HOM05D001383 ORTHO05D000309 8.0e-06 54.3 63 41.3
Hma1.2p1_1098F.1_g256770 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 8.0e-06 54.3 78 37.2
Peaxi162Scf01414g00015 Petunia axillaris HOM05D001383 ORTHO05D000309 8.0e-06 54.3 74 35.1
SGA_v2.0_scaffold152G36801 Striga asiatica HOM05D001383 ORTHO05D000309 8.0e-06 54.3 96 39.6
SGA_v2.0_scaffold3G01769 Striga asiatica HOM05D001383 ORTHO05D000309 8.0e-06 54.3 96 39.6


User provided reference genes

Program Settings