Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv04937 Davidia involucrata HOM05D005273 ORTHO05D006195 3.8e-196 688.0 341 100.0
GSVIVG01020564001 Vitis vinifera HOM05D005273 ORTHO05D006195 1.0e-153 547.0 345 79.4
Hma1.2p1_0002F.1_g002020 Hydrangea macrophylla HOM05D005273 ORTHO05D006195 8.9e-153 543.9 373 74.8
CSS0011944 Camellia sinensis var. sinensis HOM05D005273 ORTHO05D006195 2.2e-151 539.3 356 76.4
CSS0048709 Camellia sinensis var. sinensis HOM05D005273 ORTHO05D006195 2.2e-151 539.3 356 76.4
FvH4_6g26410 Fragaria vesca HOM05D005273 ORTHO05D006195 5.4e-150 534.6 354 74.9
TAR627G0042 Trochodendron aralioides HOM05D005273 ORTHO05D006195 7.0e-150 534.3 379 71.2
FAN05G3218 Fragaria x ananassa HOM05D005273 ORTHO05D006195 5.0e-148 528.1 344 76.2
Nn1g04120 Nelumbo nucifera HOM05D005273 ORTHO05D006195 6.6e-148 527.7 343 76.7
MSTRG.21306 Avicennia marina HOM05D005273 ORTHO05D006195 2.5e-147 525.8 354 73.7
Migut.D02068 Erythranthe guttata HOM05D005273 ORTHO05D006195 1.6e-146 523.1 353 74.2
Solyc02g072105.1 Solanum lycopersicum HOM05D005273 ORTHO05D006195 1.6e-146 523.1 349 74.8
CANSAT64G2205 Cannabis sativa HOM05D005273 ORTHO05D006195 2.1e-146 522.7 354 73.2
RcHm_v2.0_Chr2g0127911 Rosa chinensis HOM05D005273 ORTHO05D006195 2.8e-146 522.3 355 72.7
Sabra07G0113000 Salix brachista HOM05D005273 ORTHO05D006195 3.6e-146 521.9 353 74.5
Sopen02g021070 Solanum pennellii HOM05D005273 ORTHO05D006195 4.7e-146 521.5 347 74.9
Nn1g06518 Nelumbo nucifera HOM05D005273 ORTHO05D006195 1.0e-145 520.4 360 72.5
Manes.02G045100 Manihot esculenta HOM05D005273 ORTHO05D006195 2.3e-145 519.2 347 73.8
Atru.chr6.2972 Acer truncatum HOM05D005273 ORTHO05D006195 5.2e-145 518.1 372 69.6
CDE08G0645 Ceratophyllum demersum HOM05D005273 ORTHO05D006195 5.2e-145 518.1 351 72.1
Gohir.A11G060000 Gossypium hirsutum HOM05D005273 ORTHO05D006195 5.2e-145 518.1 349 73.4
MD09G1233100 Malus domestica HOM05D005273 ORTHO05D006195 5.2e-145 518.1 354 72.9
PSO782G4868 Papaver somniferum HOM05D005273 ORTHO05D006195 8.9e-145 517.3 369 71.0
Potri.007G139700 Populus trichocarpa HOM05D005273 ORTHO05D006195 8.9e-145 517.3 347 74.4
CAN.G411.45 Capsicum annuum HOM05D005273 ORTHO05D006195 1.2e-144 516.9 354 73.7
QL08p039365 Quercus lobata HOM05D005273 ORTHO05D006195 1.2e-144 516.9 345 74.2
Sc21g0002980 Simmondsia chinensis HOM05D005273 ORTHO05D006195 2.0e-144 516.2 353 71.1
PGSC0003DMG400028417 Solanum tuberosum HOM05D005273 ORTHO05D006195 3.4e-144 515.4 347 73.8
Prupe.3G131200 Prunus persica HOM05D005273 ORTHO05D006195 4.4e-144 515.0 354 72.6
TWI59G0041 Tripterygium wilfordii HOM05D005273 ORTHO05D006195 9.8e-144 513.8 356 72.2
Carub.0007s1834 Capsella rubella HOM05D005273 ORTHO05D006195 1.3e-143 513.5 356 71.1
DCAR_013064 Daucus carota HOM05D005273 ORTHO05D006195 1.7e-143 513.1 346 72.5
Gorai.007G069300 Gossypium raimondii HOM05D005273 ORTHO05D006195 2.2e-143 512.7 349 72.2
Duzib264G0403 Durio zibethinus HOM05D005273 ORTHO05D006195 3.7e-143 511.9 349 73.1
PSO478G2492 Papaver somniferum HOM05D005273 ORTHO05D006195 3.7e-143 511.9 363 71.3
Ciclev10015816m.g Citrus clementina HOM05D005273 ORTHO05D006195 8.3e-143 510.8 347 72.3
AL7G30590 Arabidopsis lyrata HOM05D005273 ORTHO05D006195 1.9e-142 509.6 354 70.9
Lsat_1_v5_gn_4_66761 Lactuca sativa HOM05D005273 ORTHO05D006195 1.9e-142 509.6 344 73.3
Sabra07G0117800 Salix brachista HOM05D005273 ORTHO05D006195 2.4e-142 509.2 370 70.8
Gohir.D11G064100 Gossypium hirsutum HOM05D005273 ORTHO05D006195 3.2e-142 508.8 343 72.9
CANSAT64G2383 Cannabis sativa HOM05D005273 ORTHO05D006195 5.4e-142 508.1 344 73.5
CARHR229970 Cardamine hirsuta HOM05D005273 ORTHO05D006195 5.4e-142 508.1 355 70.1
Cc06_g20460 Coffea canephora HOM05D005273 ORTHO05D006195 5.4e-142 508.1 354 73.4
ATR0737G119 Amborella trichopoda HOM05D005273 ORTHO05D006195 7.0e-142 507.7 346 72.0
Sed0018091 Sechium edule HOM05D005273 ORTHO05D006195 7.0e-142 507.7 350 72.0
Aqoxy6G00048 Aquilegia oxysepala HOM05D005273 ORTHO05D006195 1.2e-141 506.9 346 73.1
Duzib147G0196 Durio zibethinus HOM05D005273 ORTHO05D006195 1.2e-141 506.9 344 73.3
A03p53890 Brassica napus HOM05D005273 ORTHO05D006195 2.7e-141 505.8 355 70.7
BraA03t14458Z Brassica rapa HOM05D005273 ORTHO05D006195 2.7e-141 505.8 355 70.7
HanXRQChr15g0466031 Helianthus annuus HOM05D005273 ORTHO05D006195 2.7e-141 505.8 344 72.1
COL.COLO4_33584 Corchorus olitorius HOM05D005273 ORTHO05D006195 4.6e-141 505.0 353 70.3
Hund09652 Selenicereus undatus HOM05D005273 ORTHO05D006195 6.0e-141 504.6 346 72.0
Thhalv10025474m.g Eutrema salsugineum HOM05D005273 ORTHO05D006195 7.8e-141 504.2 343 72.3
BolC7t45723H Brassica oleracea HOM05D005273 ORTHO05D006195 1.0e-140 503.8 355 70.4
ClCG10G015250 Citrullus lanatus HOM05D005273 ORTHO05D006195 1.0e-140 503.8 350 71.7
Haze_12807 Corylus avellana HOM05D005273 ORTHO05D006195 1.0e-140 503.8 358 71.5
ECA246G2010 Erigeron canadensis HOM05D005273 ORTHO05D006195 1.0e-140 503.8 344 73.3
THA.LOC104823543 Tarenaya hassleriana HOM05D005273 ORTHO05D006195 1.0e-140 503.8 352 71.0
Carub.0001s3611 Capsella rubella HOM05D005273 ORTHO05D006195 1.3e-140 503.4 354 69.8
MBI07_g30188_MAGBIO Magnolia biondii HOM05D005273 ORTHO05D006195 3.0e-140 502.3 311 78.8
PGR142G4354 Punica granatum HOM05D005273 ORTHO05D006195 3.0e-140 502.3 343 72.3
AT4G22930 Arabidopsis thaliana HOM05D005273 ORTHO05D006195 6.6e-140 501.1 354 69.5
BcaNung01659 Brassica carinata HOM05D005273 ORTHO05D006195 8.6e-140 500.7 357 69.7
Aa31LG2G13370 Aethionema arabicum HOM05D005273 ORTHO05D006195 1.1e-139 500.4 354 69.5
C07p52300 Brassica napus HOM05D005273 ORTHO05D006195 1.9e-139 499.6 355 69.9
CsaV3_3G041260 Cucumis sativus L. HOM05D005273 ORTHO05D006195 1.9e-139 499.6 350 71.1
SalBow1G1167 Salvia bowleyana HOM05D005273 ORTHO05D006195 1.9e-139 499.6 347 72.3
Sp7g21020 Schrenkiella parvula HOM05D005273 ORTHO05D006195 2.5e-139 499.2 343 71.4
A01p14180 Brassica napus HOM05D005273 ORTHO05D006195 3.3e-139 498.8 354 69.8
AUR62012902 Chenopodium quinoa HOM05D005273 ORTHO05D006195 3.3e-139 498.8 345 72.2
Ah.11g045620 Amaranthus hybridus HOM05D005273 ORTHO05D006195 5.6e-139 498.0 344 71.5
BraA01t01367Z Brassica rapa HOM05D005273 ORTHO05D006195 9.5e-139 497.3 354 69.5
arahy.Tifrunner.gnm1.ann1.EEV1KR Arachis hypogaea HOM05D005273 ORTHO05D006195 1.2e-138 496.9 342 71.6
SalBow1G7481 Salvia bowleyana HOM05D005273 ORTHO05D006195 3.6e-138 495.4 360 70.0
THA.LOC104814179 Tarenaya hassleriana HOM05D005273 ORTHO05D006195 4.7e-138 495.0 341 72.1
arahy.Tifrunner.gnm1.ann1.RDE8QD Arachis hypogaea HOM05D005273 ORTHO05D006195 8.1e-138 494.2 342 71.1
vmacro12316 Vaccinium macrocarpon HOM05D005273 ORTHO05D006195 1.4e-137 493.4 445 59.6
arahy.Tifrunner.gnm1.ann1.891C6J Arachis hypogaea HOM05D005273 ORTHO05D006195 4.0e-137 491.9 341 71.3
Eucgr.K01040 Eucalyptus grandis HOM05D005273 ORTHO05D006195 4.0e-137 491.9 352 69.3
Os01g0747500 Oryza sativa ssp. japonica HOM05D005273 ORTHO05D006195 5.2e-137 491.5 343 70.6
Glyma.12G114500 Glycine max HOM05D005273 ORTHO05D006195 8.9e-137 490.7 342 71.6
Zm00001eb153030 Zea mays HOM05D005273 ORTHO05D006195 1.5e-136 490.0 339 70.8
MELO3C009854.2 Cucumis melo HOM05D005273 ORTHO05D006195 2.0e-136 489.6 359 69.1
Lj3g0011026 Lotus japonicus HOM05D005273 ORTHO05D006195 7.5e-136 487.6 341 70.7
VMungo1127G0137 Vigna mungo HOM05D005273 ORTHO05D006195 2.2e-135 486.1 341 70.4
arahy.Tifrunner.gnm1.ann1.YR7R6W Arachis hypogaea HOM05D005273 ORTHO05D006195 1.9e-134 483.0 337 70.6
Ca_18943_v3 Cicer arietinum L. HOM05D005273 ORTHO05D006195 1.9e-134 483.0 341 69.5
SGA_v2.0_scaffold25G10971 Striga asiatica HOM05D005273 ORTHO05D006195 1.9e-134 483.0 357 68.1
Phvul.011G119600 Phaseolus vulgaris HOM05D005273 ORTHO05D006195 2.4e-134 482.6 341 70.1
EL10Ac3g07435 Beta vulgaris HOM05D005273 ORTHO05D006195 3.2e-134 482.3 358 68.4
unitig_899.g15313 Utricularia gibba HOM05D005273 ORTHO05D006195 5.4e-134 481.5 344 70.3
Lalb_Chr03g0027211 Lupinus albus HOM05D005273 ORTHO05D006195 1.2e-133 480.3 341 69.2
Rhsim06G0140600 Rhododendron simsii HOM05D005273 ORTHO05D006195 1.2e-133 480.3 458 57.4
Psat7g169200 Pisum sativum HOM05D005273 ORTHO05D006195 1.6e-133 479.9 341 68.9
AUR62011776 Chenopodium quinoa HOM05D005273 ORTHO05D006195 2.1e-133 479.6 400 62.0
Medtr4g078370 Medicago truncatula HOM05D005273 ORTHO05D006195 3.5e-133 478.8 341 68.6
Phvul.010G107600 Phaseolus vulgaris HOM05D005273 ORTHO05D006195 3.5e-133 478.8 341 69.8
Glyma.06G291600 Glycine max HOM05D005273 ORTHO05D006195 1.3e-132 476.9 341 69.5
TWI18G0085 Tripterygium wilfordii HOM05D005273 ORTHO05D006195 1.1e-131 473.8 344 70.1
CiPaw.04G127500 Carya illinoinensis HOM05D005273 ORTHO05D006195 1.5e-131 473.4 319 74.3
HPP92_004898 Vanilla planifolia HOM05D005273 ORTHO05D006195 3.3e-131 472.2 346 67.9
SHI10390 Sapria himalayana HOM05D005273 ORTHO05D006195 5.8e-128 461.5 345 66.1
C01p17440 Brassica napus HOM05D000022 ORTHO05D006195 3.3e-123 445.7 360 63.9
Cpa.g.sc83.46 Carica papaya HOM05D005273 ORTHO05D006195 2.8e-122 442.6 338 67.8
BcaC09g51057 Brassica carinata HOM05D000022 ORTHO05D006195 3.4e-120 435.6 365 61.1
Lj5g0005541 Lotus japonicus HOM05D005273 ORTHO05D006195 1.6e-117 426.8 304 69.7
Mapoly0001s0029 Marchantia polymorpha HOM05D005273 ORTHO05D006195 3.5e-117 425.6 339 63.4
SMO347G0496 Selaginella moellendorffii HOM05D005273 ORTHO05D006195 1.3e-114 417.2 346 61.6
Pp3c13_8930 Physcomitrium patens HOM05D005273 ORTHO05D006195 2.8e-114 416.0 351 60.1
Thecc.K0007100 Theobroma cacao HOM05D005273 ORTHO05D006195 9.3e-110 401.0 228 83.8
CSS0013056 Camellia sinensis var. sinensis HOM05D005273 ORTHO05D006195 5.3e-105 385.2 326 63.5
Thecc.01G150900 Theobroma cacao HOM05D005273 ORTHO05D006195 4.5e-104 382.1 270 71.5
CBR_g21229 Chara braunii HOM05D005273 ORTHO05D006195 1.9e-102 376.7 329 56.5
Nitab4.5_0006070g0020 Nicotiana tabacum HOM05D005273 ORTHO05D006195 1.3e-100 370.5 283 69.6
CSS0022573 Camellia sinensis var. sinensis HOM05D005273 ORTHO05D006195 2.3e-100 369.8 333 61.3
Nitab4.5_0000437g0040 Nicotiana tabacum HOM05D005273 ORTHO05D006195 3.9e-100 369.0 283 68.9
AUR62011723 Chenopodium quinoa HOM05D005273 ORTHO05D006195 9.0e-97 357.8 259 69.5
AUR62024621 Chenopodium quinoa HOM05D005273 ORTHO05D006195 6.5e-95 351.7 255 68.6
Cre11.g467550 Chlamydomonas reinhardtii HOM05D005273 ORTHO05D006195 7.1e-94 348.2 343 52.2
FAN02G4311 Fragaria x ananassa HOM05D005273 ORTHO05D006195 7.9e-93 344.7 199 83.4
Cfa014627 Carpinus fangiana HOM05D005273 ORTHO05D006195 3.0e-92 342.8 379 52.5
Lj1C718T2 Lonicera japonica HOM05D005273 ORTHO05D006195 1.1e-89 334.3 190 85.3
PRCOL_00003989 Prasinoderma coloniale HOM05D005273 ORTHO05D006195 2.2e-87 326.6 331 51.4
QL08p039454 Quercus lobata HOM05D005273 ORTHO05D006195 1.1e-86 324.3 198 80.3
MCO16G183 Micromonas commoda HOM05D005273 ORTHO05D006195 5.1e-84 315.5 339 47.8
BolC1t01684H Brassica oleracea HOM05D005273 ORTHO05D006195 1.3e-82 310.8 232 65.1
AagrBONN_evm.TU.Sc2ySwM_117.50 Anthoceros agrestis HOM05D005273 ORTHO05D006195 1.4e-81 307.4 199 74.9
Haze_27262 Corylus avellana HOM05D005273 ORTHO05D006195 1.5e-75 287.3 339 46.3
Peaxi162Scf00112g00113 Petunia axillaris HOM05D005273 ORTHO05D006195 4.2e-62 242.7 141 83.7
SEGI_10566 Sequoiadendron giganteum HOM05D005273 ORTHO05D006195 5.5e-62 242.3 157 73.2
Atru.chr6.2977 Acer truncatum HOM05D005273 ORTHO05D006195 5.9e-56 222.2 182 62.1
Actinidia11084 Actinidia chinensis HOM05D005273 ORTHO05D006195 8.8e-52 208.4 176 63.1
EL10Ac9g21222 Beta vulgaris HOM05D005273 ORTHO05D006195 2.4e-41 173.7 276 42.0
Atru.chr6.2976 Acer truncatum HOM05D005273 ORTHO05D006195 4.1e-41 172.9 99 84.8
TPR.G7356 Trifolium pratense HOM05D005273 ORTHO05D006195 5.4e-41 172.6 94 86.2
Oeu007130.1 Olea europaea HOM05D005273 ORTHO05D006195 7.3e-38 162.2 302 36.8
Peaxi162Scf00112g00110 Petunia axillaris HOM05D005273 ORTHO05D006195 1.3e-26 124.8 69 84.1
Lj1A718G26 Lonicera japonica HOM05D005273 ORTHO05D006195 7.0e-25 119.0 74 70.3
Cfa022577 Carpinus fangiana HOM05D005273 ORTHO05D006195 2.0e-24 117.5 231 34.6
Lj3g0005703 Lotus japonicus HOM05D002777 ORTHO05D001516 1.3e-23 114.8 81 69.1
Lalb_Chr09g0333161 Lupinus albus HOM05D005273 ORTHO05D006195 4.9e-18 96.3 87 55.2
BcaNung01011 Brassica carinata HOM05D005273 ORTHO05D006195 6.6e-15 85.9 67 70.1
AUR62036776 Chenopodium quinoa HOM05D005273 ORTHO05D006195 1.8e-12 77.8 128 40.6
TPR.G31736 Trifolium pratense HOM05D005273 ORTHO05D006195 8.9e-12 75.5 45 73.3
Lj5A796T26 Lonicera japonica HOM05D005273 ORTHO05D006195 2.9e-10 70.5 41 73.2
AUR62041872 Chenopodium quinoa HOM05D005273 ORTHO05D006195 2.5e-06 57.4 39 66.7


User provided reference genes

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