Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv04905 Davidia involucrata HOM05D005638 ORTHO05D006913 4.0e-179 631.3 321 100.0
CSS0002078 Camellia sinensis var. sinensis HOM05D005638 ORTHO05D006913 2.1e-140 502.7 421 66.0
CSS0005399 Camellia sinensis var. sinensis HOM05D005638 ORTHO05D006913 1.1e-139 500.4 421 65.8
Hma1.2p1_0882F.1_g232180 Hydrangea macrophylla HOM05D005638 ORTHO05D006913 6.4e-129 464.5 409 63.3
Lj2C166G5 Lonicera japonica HOM05D005638 ORTHO05D006913 3.4e-122 442.2 440 57.5
GSVIVG01011806001 Vitis vinifera HOM05D005638 ORTHO05D006913 1.7e-121 439.9 415 59.5
Cc11_g09280 Coffea canephora HOM05D005638 ORTHO05D006913 9.3e-120 434.1 420 56.7
CAN.G1489.15 Capsicum annuum HOM05D005638 ORTHO05D006913 5.1e-118 428.3 416 56.0
Ciclev10015376m.g Citrus clementina HOM05D005638 ORTHO05D006913 8.7e-118 427.6 419 57.8
Prupe.1G319900 Prunus persica HOM05D005638 ORTHO05D006913 1.5e-117 426.8 421 57.5
PGSC0003DMG401030517 Solanum tuberosum HOM05D005638 ORTHO05D006913 1.9e-117 426.4 417 55.2
DCAR_001932 Daucus carota HOM05D005638 ORTHO05D006913 2.8e-116 422.5 427 54.6
QL01p003053 Quercus lobata HOM05D005638 ORTHO05D006913 1.1e-115 420.6 440 55.5
Potri.008G126300 Populus trichocarpa HOM05D005638 ORTHO05D006913 1.8e-115 419.9 418 57.9
Sopen05g004380 Solanum pennellii HOM05D005638 ORTHO05D006913 2.4e-115 419.5 416 55.0
Solyc05g008540.3 Solanum lycopersicum HOM05D005638 ORTHO05D006913 3.1e-115 419.1 416 55.0
Nn4g24022 Nelumbo nucifera HOM05D005638 ORTHO05D006913 1.2e-114 417.2 416 56.7
CANSAT01G0033 Cannabis sativa HOM05D005638 ORTHO05D006913 2.9e-113 412.5 419 55.6
Haze_00683 Corylus avellana HOM05D005638 ORTHO05D006913 1.1e-112 410.6 428 54.7
ECA246G4189 Erigeron canadensis HOM05D005638 ORTHO05D006913 1.1e-112 410.6 409 56.2
FvH4_4g26400 Fragaria vesca HOM05D005638 ORTHO05D006913 1.9e-112 409.8 421 55.8
FAN12G2479 Fragaria x ananassa HOM05D005638 ORTHO05D006913 1.9e-112 409.8 421 55.8
Manes.10G073400 Manihot esculenta HOM05D005638 ORTHO05D006913 1.9e-112 409.8 399 56.9
Nitab4.5_0000350g0120 Nicotiana tabacum HOM05D005638 ORTHO05D006913 2.5e-112 409.5 425 53.9
ClCG07G004650 Citrullus lanatus HOM05D005638 ORTHO05D006913 7.1e-112 407.9 419 55.4
FAN12G3267 Fragaria x ananassa HOM05D005638 ORTHO05D006913 1.2e-111 407.1 421 55.6
HanXRQChr17g0534901 Helianthus annuus HOM05D005638 ORTHO05D006913 1.2e-111 407.1 413 54.5
Dinv16164 Davidia involucrata HOM05D005638 ORTHO05D006913 2.7e-111 406.0 238 89.5
RcHm_v2.0_Chr4g0434031 Rosa chinensis HOM05D005638 ORTHO05D006913 6.0e-111 404.8 417 55.2
vmacro10617 Vaccinium macrocarpon HOM05D005638 ORTHO05D006913 1.0e-110 404.1 461 51.6
Lsat_1_v5_gn_3_11020 Lactuca sativa HOM05D005638 ORTHO05D006913 2.3e-110 402.9 420 54.3
Thecc.05G134700 Theobroma cacao HOM05D005638 ORTHO05D006913 3.9e-110 402.1 416 55.5
TWI75G0624 Tripterygium wilfordii HOM05D005638 ORTHO05D006913 3.9e-110 402.1 415 56.4
Migut.E00391 Erythranthe guttata HOM05D005638 ORTHO05D006913 5.1e-110 401.7 419 54.4
Peaxi162Scf00205g01130 Petunia axillaris HOM05D005638 ORTHO05D006913 6.7e-110 401.4 409 54.8
Oeu064207.2 Olea europaea HOM05D005638 ORTHO05D006913 8.7e-110 401.0 463 51.4
Sabra08G0095100 Salix brachista HOM05D005638 ORTHO05D006913 2.2e-108 396.4 409 56.2
CsaV3_5G010590 Cucumis sativus L. HOM05D005638 ORTHO05D006913 3.7e-108 395.6 411 54.7
MD16G1034700 Malus domestica HOM05D005638 ORTHO05D006913 3.7e-108 395.6 422 54.3
MELO3C034164.2 Cucumis melo HOM05D005638 ORTHO05D006913 4.8e-108 395.2 411 55.5
MSTRG.2199 Avicennia marina HOM05D005638 ORTHO05D006913 6.3e-108 394.8 421 55.1
COL.COLO4_22224 Corchorus olitorius HOM05D005638 ORTHO05D006913 1.4e-107 393.7 415 53.5
Gorai.013G001800 Gossypium raimondii HOM05D005638 ORTHO05D006913 2.4e-107 392.9 412 54.1
FAN07G1772 Fragaria x ananassa HOM05D005638 ORTHO05D006913 3.8e-105 385.6 464 49.6
Gohir.A13G000300 Gossypium hirsutum HOM05D005638 ORTHO05D006913 5.0e-105 385.2 416 53.1
Sed0003483 Sechium edule HOM05D005638 ORTHO05D006913 2.5e-104 382.9 408 54.4
Eucgr.H00037 Eucalyptus grandis HOM05D005638 ORTHO05D006913 3.2e-104 382.5 409 52.8
SalBow8G2600 Salvia bowleyana HOM05D005638 ORTHO05D006913 1.2e-103 380.6 395 56.5
Hund25015 Selenicereus undatus HOM05D005638 ORTHO05D006913 1.4e-102 377.1 415 53.0
Aqoxy5G03877 Aquilegia oxysepala HOM05D005638 ORTHO05D006913 1.1e-101 374.0 413 52.8
arahy.Tifrunner.gnm1.ann1.CLD3MC Arachis hypogaea HOM05D005638 ORTHO05D006913 1.1e-101 374.0 421 51.1
Medtr1g109100 Medicago truncatula HOM05D005638 ORTHO05D006913 2.0e-101 373.2 414 52.9
Aa31LG2G8760 Aethionema arabicum HOM05D005638 ORTHO05D006913 2.5e-101 372.9 404 50.7
Sc14g0007070 Simmondsia chinensis HOM05D005638 ORTHO05D006913 3.3e-101 372.5 412 52.4
Nitab4.5_0013146g0020 Nicotiana tabacum HOM05D005638 ORTHO05D006913 5.7e-101 371.7 485 46.4
PGR119G2299 Punica granatum HOM05D005638 ORTHO05D006913 1.7e-100 370.2 415 52.3
EL10Ac6g14273 Beta vulgaris HOM05D005638 ORTHO05D006913 2.8e-100 369.4 414 51.7
FAN22G2072 Fragaria x ananassa HOM05D005638 ORTHO05D006913 3.7e-100 369.0 439 50.6
arahy.Tifrunner.gnm1.ann1.NRC6UQ Arachis hypogaea HOM05D005638 ORTHO05D006913 4.8e-100 368.6 414 51.2
Psat6g222760 Pisum sativum HOM05D005638 ORTHO05D006913 6.3e-100 368.2 413 52.1
BcaC06g31332 Brassica carinata HOM05D005638 ORTHO05D006913 1.1e-99 367.5 417 48.9
CARHR143670 Cardamine hirsuta HOM05D005638 ORTHO05D006913 2.4e-99 366.3 417 49.2
FAN17G1216 Fragaria x ananassa HOM05D005638 ORTHO05D006913 6.9e-99 364.8 435 50.3
Phvul.007G034200 Phaseolus vulgaris HOM05D005638 ORTHO05D006913 1.5e-98 363.6 412 51.2
Rhsim11G0032100 Rhododendron simsii HOM05D005638 ORTHO05D006913 1.5e-98 363.6 238 79.0
Carub.0005s0010 Capsella rubella HOM05D005638 ORTHO05D006913 2.6e-98 362.8 417 49.4
Sp2g12590 Schrenkiella parvula HOM05D005638 ORTHO05D006913 4.5e-98 362.1 417 48.7
AL5G10070 Arabidopsis lyrata HOM05D005638 ORTHO05D006913 2.9e-97 359.4 417 48.2
C07p31590 Brassica napus HOM05D005638 ORTHO05D006913 2.9e-97 359.4 445 46.1
A06p44660 Brassica napus HOM05D005638 ORTHO05D006913 3.8e-97 359.0 445 46.3
THA.LOC104805050 Tarenaya hassleriana HOM05D005638 ORTHO05D006913 3.8e-97 359.0 417 48.9
BcaC06g34215 Brassica carinata HOM05D005638 ORTHO05D006913 8.5e-97 357.8 445 45.8
BraA06t27339Z Brassica rapa HOM05D005638 ORTHO05D006913 8.5e-97 357.8 422 47.6
Cpa.g.sc65.90 Carica papaya HOM05D005638 ORTHO05D006913 8.5e-97 357.8 366 56.8
Thhalv10000894m.g Eutrema salsugineum HOM05D005638 ORTHO05D006913 8.5e-97 357.8 423 47.5
CiPaw.05G245200 Carya illinoinensis HOM05D005638 ORTHO05D006913 1.9e-96 356.7 421 50.4
Lj5g0007245 Lotus japonicus HOM05D005638 ORTHO05D006913 1.2e-95 354.0 407 50.6
Ca_30212_v3 Cicer arietinum L. HOM05D005638 ORTHO05D006913 2.7e-95 352.8 401 51.9
Lalb_Chr02g0145641 Lupinus albus HOM05D005638 ORTHO05D006913 6.1e-95 351.7 409 49.1
Gohir.D13G001900 Gossypium hirsutum HOM05D005638 ORTHO05D006913 3.9e-94 349.0 356 56.5
PSO017G2298 Papaver somniferum HOM05D005638 ORTHO05D006913 8.8e-94 347.8 401 50.9
AT2G01120 Arabidopsis thaliana HOM05D005638 ORTHO05D006913 2.0e-93 346.7 418 47.1
PSO478G2841 Papaver somniferum HOM05D005638 ORTHO05D006913 2.6e-93 346.3 401 50.6
AUR62042716 Chenopodium quinoa HOM05D005638 ORTHO05D006913 7.4e-93 344.7 447 47.0
Atru.chr11.333 Acer truncatum HOM05D005638 ORTHO05D006913 9.7e-93 344.4 233 76.8
Glyma.10G268100 Glycine max HOM05D005638 ORTHO05D006913 1.8e-91 340.1 413 50.4
Duzib106G1906 Durio zibethinus HOM05D005638 ORTHO05D006913 7.0e-91 338.2 414 48.3
PSO782G2730 Papaver somniferum HOM05D005638 ORTHO05D006913 1.3e-89 334.0 401 49.1
Glyma.20G123000 Glycine max HOM05D005638 ORTHO05D006913 6.5e-89 331.6 413 49.9
BcaB07g30423 Brassica carinata HOM05D005638 ORTHO05D006913 2.5e-88 329.7 434 44.9
MBI10_g06749_MAGBIO Magnolia biondii HOM05D005638 ORTHO05D006913 2.3e-86 323.2 344 53.2
C02p49080 Brassica napus HOM05D005638 ORTHO05D006913 2.2e-84 316.6 314 54.1
HPP92_020141 Vanilla planifolia HOM05D005638 ORTHO05D006913 5.3e-83 312.0 414 44.0
ATR0691G289 Amborella trichopoda HOM05D005638 ORTHO05D006913 7.0e-83 311.6 416 48.1
TPR.G31713 Trifolium pratense HOM05D005638 ORTHO05D006913 2.0e-82 310.1 234 68.8
Os01g0683400 Oryza sativa ssp. japonica HOM05D005638 ORTHO05D006913 1.3e-81 307.4 458 40.4
BolC2t10998H Brassica oleracea HOM05D005638 ORTHO05D006913 4.7e-79 298.9 349 50.1
unitig_52.g17425 Utricularia gibba HOM05D005638 ORTHO05D006913 8.0e-79 298.1 399 46.6
VMungo0720G2401 Vigna mungo HOM05D005638 ORTHO05D006913 8.0e-79 298.1 238 65.1
BcaC03g16999 Brassica carinata HOM05D005638 ORTHO05D006913 1.3e-76 290.8 226 64.6
SEGI_39107 Sequoiadendron giganteum HOM05D005638 ORTHO05D006913 2.8e-76 289.7 417 41.2
Ah.03g138510 Amaranthus hybridus HOM05D005638 ORTHO05D006913 6.5e-73 278.5 235 62.1
Zm00001eb156550 Zea mays HOM05D005638 ORTHO05D006913 5.7e-69 265.4 395 41.8
PSO170G3371 Papaver somniferum HOM05D005638 ORTHO05D006913 3.7e-68 262.7 226 62.8
Atru.chr11.340 Acer truncatum HOM05D005638 ORTHO05D006913 5.9e-66 255.4 308 51.3
Hma1.2p1_0882F.1_g232190 Hydrangea macrophylla HOM05D005638 ORTHO05D006913 3.4e-61 239.6 138 87.7
TAR622G0052 Trochodendron aralioides HOM05D005638 ORTHO05D006913 4.1e-59 232.6 198 65.2
AUR62014211 Chenopodium quinoa HOM05D005638 ORTHO05D006913 1.7e-57 227.3 268 51.1
SEGI_20204 Sequoiadendron giganteum HOM05D005638 ORTHO05D006913 1.2e-47 194.5 180 57.2
A02p31700 Brassica napus HOM05D005638 ORTHO05D006913 4.7e-47 192.6 227 48.5
MD13G1032700 Malus domestica HOM05D005638 ORTHO05D006913 6.2e-47 192.2 145 71.7
Pp3c16_11150 Physcomitrium patens HOM05D005638 ORTHO05D006913 2.2e-44 183.7 231 44.2
CBR_g38777 Chara braunii HOM05D005638 ORTHO05D006913 3.2e-43 179.9 391 34.0
Mapoly0031s0066 Marchantia polymorpha HOM05D005638 ORTHO05D006913 5.4e-43 179.1 421 32.8
CDE11G0802 Ceratophyllum demersum HOM05D005638 ORTHO05D006913 3.1e-38 163.3 102 75.5
Hma1.2p1_0882F.1_g232170 Hydrangea macrophylla HOM05D005638 ORTHO05D006913 4.6e-34 149.4 215 44.7
SMO351G0247 Selaginella moellendorffii HOM05D005638 ORTHO05D006913 1.0e-33 148.3 338 33.1
SGA_v2.0_scaffold170G38821 Striga asiatica HOM05D005638 ORTHO05D006913 3.9e-33 146.4 263 37.3
AagrBONN_evm.TU.Sc2ySwM_344.3309 Anthoceros agrestis HOM05D005638 ORTHO05D006913 8.1e-31 138.7 199 42.7
Ca_23705_v3 Cicer arietinum L. HOM05D005638 ORTHO05D006913 4.9e-28 129.4 233 38.6
Cfa015815 Carpinus fangiana HOM05D005638 ORTHO05D006913 6.4e-28 129.0 187 46.0
Rhsim11G0032000 Rhododendron simsii HOM05D005638 ORTHO05D006913 3.2e-27 126.7 86 72.1
Thecc.06G067600 Theobroma cacao HOM05D005638 ORTHO05D006913 2.3e-25 120.6 114 56.1
TPR.G7417 Trifolium pratense HOM05D005638 ORTHO05D006913 1.2e-18 98.2 103 55.3
MD13G1032600 Malus domestica HOM05D005638 ORTHO05D006913 1.0e-17 95.1 86 57.0
Rhsim09G0101800 Rhododendron simsii HOM05D005638 ORTHO05D006913 1.5e-16 91.3 61 77.0
SEGI_29357 Sequoiadendron giganteum HOM05D005638 ORTHO05D006913 4.9e-12 76.3 102 42.2
PRCOL_00001621 Prasinoderma coloniale HOM05D005638 ORTHO05D006913 3.2e-11 73.6 255 26.3
TPR.G15740 Trifolium pratense HOM05D005638 ORTHO05D006913 4.2e-11 73.2 88 48.9
BraA02t08176Z Brassica rapa HOM05D005638 ORTHO05D006913 2.7e-10 70.5 51 68.6
FAN28G2655 Fragaria x ananassa HOM05D005638 ORTHO05D006913 1.0e-09 68.6 49 65.3


User provided reference genes

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