Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv04888 Davidia involucrata HOM05D005467 ORTHO05D006523 9.9e-115 416.8 207 100.0
Dinv05879 Davidia involucrata HOM05D005467 ORTHO05D006523 4.6e-104 381.3 194 97.9
Actinidia14942 Actinidia chinensis HOM05D005467 ORTHO05D006523 3.8e-90 335.1 195 85.1
CSS0047900 Camellia sinensis var. sinensis HOM05D005467 ORTHO05D006523 3.8e-90 335.1 195 85.1
QL01p002615 Quercus lobata HOM05D005467 ORTHO05D006523 1.9e-89 332.8 194 84.0
Hma1.2p1_0114F.1_g055340 Hydrangea macrophylla HOM05D005467 ORTHO05D006523 1.6e-88 329.7 186 87.1
CiPaw.05G246600 Carya illinoinensis HOM05D005467 ORTHO05D006523 1.0e-87 327.0 186 85.5
Rhsim09G0101300 Rhododendron simsii HOM05D005467 ORTHO05D006523 1.1e-86 323.6 196 82.1
Lj6C750G3 Lonicera japonica HOM05D005467 ORTHO05D006523 4.3e-86 321.6 199 80.9
Cfa008565 Carpinus fangiana HOM05D005467 ORTHO05D006523 7.4e-86 320.9 186 84.4
Ciclev10015390m.g Citrus clementina HOM05D005467 ORTHO05D006523 3.7e-85 318.5 186 81.2
vmacro10622 Vaccinium macrocarpon HOM05D005467 ORTHO05D006523 6.3e-85 317.8 193 81.9
Nn3g18021 Nelumbo nucifera HOM05D005467 ORTHO05D006523 8.2e-85 317.4 194 79.4
PSO063G5439 Papaver somniferum HOM05D005467 ORTHO05D006523 4.1e-84 315.1 194 79.4
PSO782G0553 Papaver somniferum HOM05D005467 ORTHO05D006523 4.1e-84 315.1 194 79.4
Thecc.02G211500 Theobroma cacao HOM05D005467 ORTHO05D006523 6.9e-84 314.3 187 81.3
Glyma.20G124100 Glycine max HOM05D005467 ORTHO05D006523 1.5e-83 313.2 185 81.1
TAR629G1677 Trochodendron aralioides HOM05D005467 ORTHO05D006523 1.5e-83 313.2 194 77.8
Atru.chr11.358 Acer truncatum HOM05D005467 ORTHO05D006523 2.0e-83 312.8 186 82.8
Glyma.10G266400 Glycine max HOM05D005467 ORTHO05D006523 3.4e-83 312.0 186 79.6
PGR119G0286 Punica granatum HOM05D005467 ORTHO05D006523 4.5e-83 311.6 194 79.4
Gorai.012G123600 Gossypium raimondii HOM05D005467 ORTHO05D006523 7.7e-83 310.8 187 81.3
MD16G1031500 Malus domestica HOM05D005467 ORTHO05D006523 1.0e-82 310.5 186 80.6
Potri.010G116200 Populus trichocarpa HOM05D005467 ORTHO05D006523 1.3e-82 310.1 190 81.1
Eucgr.G02222 Eucalyptus grandis HOM05D005467 ORTHO05D006523 1.7e-82 309.7 194 78.4
VMungo0720G1946 Vigna mungo HOM05D005467 ORTHO05D006523 1.7e-82 309.7 187 79.1
Gohir.D04G138632 Gossypium hirsutum HOM05D005467 ORTHO05D006523 2.2e-82 309.3 187 80.7
Gohir.A04G099200 Gossypium hirsutum HOM05D005467 ORTHO05D006523 2.9e-82 308.9 187 81.3
MELO3C012295.2 Cucumis melo HOM05D005467 ORTHO05D006523 8.5e-82 307.4 186 79.6
Migut.L00653 Erythranthe guttata HOM05D005467 ORTHO05D006523 8.5e-82 307.4 201 75.6
Lj5g0001822 Lotus japonicus HOM05D005467 ORTHO05D006523 1.1e-81 307.0 194 74.7
Sed0008724 Sechium edule HOM05D005467 ORTHO05D006523 1.1e-81 307.0 184 80.4
GSVIVG01011792001 Vitis vinifera HOM05D005467 ORTHO05D006523 1.4e-81 306.6 185 81.1
Phvul.007G035400 Phaseolus vulgaris HOM05D005467 ORTHO05D006523 2.5e-81 305.8 187 78.1
Migut.L00826 Erythranthe guttata HOM05D005467 ORTHO05D006523 3.2e-81 305.4 201 75.1
Lalb_Chr21g0308561 Lupinus albus HOM05D005467 ORTHO05D006523 7.2e-81 304.3 187 78.6
FvH4_4g26200 Fragaria vesca HOM05D005467 ORTHO05D006523 9.4e-81 303.9 187 78.6
FAN12G3855 Fragaria x ananassa HOM05D005467 ORTHO05D006523 9.4e-81 303.9 187 78.6
CsaV3_5G034840 Cucumis sativus L. HOM05D005467 ORTHO05D006523 1.6e-80 303.1 186 78.5
CANSAT01G3134 Cannabis sativa HOM05D005467 ORTHO05D006523 2.1e-80 302.8 187 79.7
Sc04g0005780 Simmondsia chinensis HOM05D005467 ORTHO05D006523 3.6e-80 302.0 194 75.8
Sabra10G0087600 Salix brachista HOM05D005467 ORTHO05D006523 6.1e-80 301.2 217 71.4
FAN12G1869 Fragaria x ananassa HOM05D005467 ORTHO05D006523 1.0e-79 300.4 187 78.1
TWI31G0476 Tripterygium wilfordii HOM05D005467 ORTHO05D006523 1.0e-79 300.4 191 77.5
RcHm_v2.0_Chr4g0433781 Rosa chinensis HOM05D005467 ORTHO05D006523 1.4e-79 300.1 186 78.5
arahy.Tifrunner.gnm1.ann1.U1J3BU Arachis hypogaea HOM05D005467 ORTHO05D006523 5.1e-79 298.1 184 77.2
Sabra10G0086000 Salix brachista HOM05D005467 ORTHO05D006523 5.1e-79 298.1 221 69.7
FAN07G0694 Fragaria x ananassa HOM05D005467 ORTHO05D006523 8.8e-79 297.4 187 77.5
Aqoxy3G00153 Aquilegia oxysepala HOM05D005467 ORTHO05D006523 7.4e-78 294.3 192 75.0
Oeu064202.3 Olea europaea HOM05D005467 ORTHO05D006523 9.7e-78 293.9 233 66.5
Manes.06G062500 Manihot esculenta HOM05D005467 ORTHO05D006523 1.8e-76 289.7 187 76.5
Nitab4.5_0000350g0200 Nicotiana tabacum HOM05D005467 ORTHO05D006523 3.1e-76 288.9 185 74.1
MSTRG.879 Avicennia marina HOM05D005467 ORTHO05D006523 4.1e-76 288.5 202 71.8
TPR.G4835 Trifolium pratense HOM05D005467 ORTHO05D006523 5.3e-76 288.1 194 70.6
arahy.Tifrunner.gnm1.ann1.F0PHAM Arachis hypogaea HOM05D005467 ORTHO05D006523 6.9e-76 287.7 205 69.8
HanXRQChr15g0477671 Helianthus annuus HOM05D005467 ORTHO05D006523 9.1e-76 287.3 198 71.7
Medtr1g108650 Medicago truncatula HOM05D005467 ORTHO05D006523 1.5e-75 286.6 194 70.6
ECA246G2902 Erigeron canadensis HOM05D005467 ORTHO05D006523 2.0e-75 286.2 192 72.9
Peaxi162Scf00205g00928 Petunia axillaris HOM05D005467 ORTHO05D006523 4.5e-75 285.0 185 73.5
Nitab4.5_0004524g0030 Nicotiana tabacum HOM05D005467 ORTHO05D006523 6.5e-74 281.2 185 72.4
CAN.G1489.4 Capsicum annuum HOM05D005467 ORTHO05D006523 2.5e-73 279.3 188 71.8
Psat6g222960 Pisum sativum HOM05D005467 ORTHO05D006523 1.6e-72 276.6 190 69.5
AUR62014129 Chenopodium quinoa HOM05D005467 ORTHO05D006523 3.0e-71 272.3 208 66.8
Ca_11108_v3 Cicer arietinum L. HOM05D005467 ORTHO05D006523 5.2e-71 271.6 194 67.0
Os01g0506200 Oryza sativa ssp. japonica HOM05D005467 ORTHO05D006523 5.7e-70 268.1 182 70.3
ClCG05G022280 Citrullus lanatus HOM05D005467 ORTHO05D006523 9.7e-70 267.3 260 56.9
Sopen05g004250 Solanum pennellii HOM05D005467 ORTHO05D006523 1.1e-68 263.8 185 69.7
CDE06G2222 Ceratophyllum demersum HOM05D005467 ORTHO05D006523 2.4e-68 262.7 194 67.5
Solyc05g008420.4 Solanum lycopersicum HOM05D005467 ORTHO05D006523 1.2e-67 260.4 185 69.2
DCAR_007277 Daucus carota HOM05D005467 ORTHO05D006523 7.7e-67 257.7 192 66.7
SEGI_12457 Sequoiadendron giganteum HOM05D005467 ORTHO05D006523 1.0e-66 257.3 187 66.3
Ah.02g128100 Amaranthus hybridus HOM05D005467 ORTHO05D006523 2.2e-66 256.1 200 65.0
Hund24998 Selenicereus undatus HOM05D005467 ORTHO05D006523 8.5e-66 254.2 199 66.8
Haze_11049 Corylus avellana HOM05D005467 ORTHO05D006523 1.9e-65 253.1 161 80.1
Duzib248G1088 Durio zibethinus HOM05D005467 ORTHO05D006523 1.2e-64 250.4 188 69.1
Prupe.1G321400 Prunus persica HOM05D005467 ORTHO05D006523 3.0e-63 245.7 136 87.5
MBI10_g46301_MAGBIO Magnolia biondii HOM05D005467 ORTHO05D006523 2.0e-62 243.0 134 85.8
TAR622G1271 Trochodendron aralioides HOM05D005467 ORTHO05D006523 9.7e-62 240.7 143 81.8
Cc11_g09120 Coffea canephora HOM05D005467 ORTHO05D006523 2.7e-59 232.6 153 73.9
ATR0041G011 Amborella trichopoda HOM05D005467 ORTHO05D006523 1.5e-57 226.9 188 58.0
SMO172G0164 Selaginella moellendorffii HOM05D005467 ORTHO05D006523 4.2e-57 225.3 176 61.4
Cpa.g.sc65.104 Carica papaya HOM05D005467 ORTHO05D006523 7.2e-57 224.6 190 62.1
Pp3c22_2590 Physcomitrium patens HOM05D005467 ORTHO05D006523 1.6e-56 223.4 187 58.8
SGA_v2.0_scaffold50G18532 Striga asiatica HOM05D005467 ORTHO05D006523 3.1e-52 209.1 201 56.7
AagrBONN_evm.TU.Sc2ySwM_344.4352 Anthoceros agrestis HOM05D005467 ORTHO05D006523 5.4e-52 208.4 176 59.1
AUR62039552 Chenopodium quinoa HOM05D005467 ORTHO05D006523 8.9e-47 191.0 208 51.9
Nitab4.5_0000293g0010 Nicotiana tabacum HOM05D005467 ORTHO05D006523 5.7e-46 188.3 189 50.3
Nitab4.5_0000350g0270 Nicotiana tabacum HOM05D005467 ORTHO05D006523 7.5e-46 188.0 190 50.0
unitig_21.g20024 Utricularia gibba HOM05D000903 ORTHO05D000731 1.9e-41 173.3 184 51.1
CBR_g17592 Chara braunii HOM05D005467 ORTHO05D006523 1.7e-37 160.2 180 46.1
Peaxi162Scf00159g00824 Petunia axillaris HOM05D005467 ORTHO05D006523 3.9e-34 149.1 196 44.9
Nitab4.5_0019054g0020 Nicotiana tabacum HOM05D005467 ORTHO05D006523 1.3e-29 134.0 162 46.3
Sopen02g012020 Solanum pennellii HOM05D005467 ORTHO05D006523 1.7e-29 133.7 187 40.6
PRCOL_00002109 Prasinoderma coloniale HOM05D005467 ORTHO05D006523 3.2e-28 129.4 176 40.9
Nitab4.5_0002820g0070 Nicotiana tabacum HOM05D005467 ORTHO05D006523 4.1e-28 129.0 146 47.9
Peaxi162Scf00159g00823 Petunia axillaris HOM05D005467 ORTHO05D006523 4.1e-28 129.0 187 38.0
Sopen02g012000 Solanum pennellii HOM05D005467 ORTHO05D006523 7.0e-28 128.3 174 39.7
Sopen02g012010 Solanum pennellii HOM05D005467 ORTHO05D006523 1.7e-26 123.6 172 39.0
Solyc02g038660.3 Solanum lycopersicum HOM05D005467 ORTHO05D006523 1.9e-25 120.2 171 39.2
PGSC0003DMG400017873 Solanum tuberosum HOM05D005467 ORTHO05D006523 9.5e-25 117.9 186 36.0
MCO12G173 Micromonas commoda HOM05D005467 ORTHO05D006523 4.0e-23 112.5 144 43.8
Phvul.008G137000 Phaseolus vulgaris HOM05D005467 ORTHO05D006523 6.4e-21 105.1 55 85.5
Lsat_1_v5_gn_3_107041 Lactuca sativa HOM05D005467 ORTHO05D006523 2.1e-19 100.1 141 46.1
PGSC0003DMG400038827 Solanum tuberosum HOM05D005467 ORTHO05D006523 8.6e-18 94.7 104 39.4
Gohir.D04G138566 Gossypium hirsutum HOM05D005467 ORTHO05D006523 5.6e-17 92.0 51 84.3
Sed0021963 Sechium edule HOM05D005467 ORTHO05D006523 6.2e-16 88.6 210 32.9
Peaxi162Scf00205g00812 Petunia axillaris HOM05D005467 ORTHO05D006523 8.1e-16 88.2 125 40.8
Solyc02g038670.3 Solanum lycopersicum HOM05D005467 ORTHO05D006523 3.1e-15 86.3 169 32.5
Lsat_1_v5_gn_3_54101 Lactuca sativa HOM05D005467 ORTHO05D006523 5.2e-15 85.5 51 80.4
Zm00001eb341680 Zea mays HOM05D005467 ORTHO05D006523 3.8e-13 79.3 51 70.6
Haze_11050 Corylus avellana HOM05D005467 ORTHO05D006523 4.2e-12 75.9 43 79.1
HPP92_008650 Vanilla planifolia HOM05D005467 ORTHO05D006523 5.4e-12 75.5 51 64.7
Cc11_g09130 Coffea canephora HOM05D005467 ORTHO05D006523 1.2e-11 74.3 50 70.0
Lsat_1_v5_gn_3_86380 Lactuca sativa HOM05D005467 ORTHO05D006523 6.6e-10 68.6 43 74.4
MD05G1282800 Malus domestica HOM05D005467 ORTHO05D006523 8.7e-10 68.2 172 31.4
CDE07G1559 Ceratophyllum demersum HOM05D005467 ORTHO05D006523 1.1e-07 61.2 58 53.4
Lsat_1_v5_gn_9_124480 Lactuca sativa HOM05D001159 ORTHO05D001712 3.4e-06 56.2 45 53.3


User provided reference genes

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