Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv04866 Davidia involucrata HOM05D000928 ORTHO05D001186 6.0e-132 474.2 236 100.0
Dinv33490 Davidia involucrata HOM05D000928 ORTHO05D001186 7.7e-47 191.4 143 71.3
Dinv08523 Davidia involucrata HOM05D000928 ORTHO05D185885 1.1e-29 134.4 139 59.7
CSS0034008 Camellia sinensis var. sinensis HOM05D000928 ORTHO05D001186 4.6e-23 112.5 150 46.0
Hma1.2p1_0993F.1_g245510 Hydrangea macrophylla HOM05D000928 ORTHO05D001186 7.8e-23 111.7 154 46.8
Actinidia35742 Actinidia chinensis HOM05D005049 ORTHO05D006032 5.0e-22 109.0 147 44.2
Rhsim10G0022000 Rhododendron simsii HOM05D000928 ORTHO05D001186 1.9e-21 107.1 132 46.2
RhsimUnG0012800 Rhododendron simsii HOM05D000928 ORTHO05D001186 1.9e-21 107.1 132 46.2
Lju41A35T61 Lonicera japonica HOM05D000928 ORTHO05D001186 7.3e-21 105.1 157 42.0
vmacro05826 Vaccinium macrocarpon HOM05D000928 ORTHO05D001186 6.2e-20 102.1 161 42.2
Dinv35065 Davidia involucrata HOM05D000928 ORTHO05D001186 1.4e-19 100.9 138 50.0
Rhsim08G0054800 Rhododendron simsii HOM05D000928 ORTHO05D001186 1.3e-17 94.4 117 46.2
QL02p076450 Quercus lobata HOM05D000928 ORTHO05D001186 2.2e-17 93.6 150 43.3
Oeu054683.1 Olea europaea HOM05D000928 ORTHO05D001186 3.7e-17 92.8 122 45.1
Solyc02g086840.3 Solanum lycopersicum HOM05D000928 ORTHO05D001186 1.9e-16 90.5 146 41.8
MSTRG.3169 Avicennia marina HOM05D000928 ORTHO05D001186 4.1e-16 89.4 161 35.4
Nitab4.5_0003337g0040 Nicotiana tabacum HOM05D000928 ORTHO05D001186 9.2e-16 88.2 156 39.7
Cc07_g02210 Coffea canephora HOM05D000928 ORTHO05D001186 1.2e-15 87.8 140 39.3
CAN.G206.28 Capsicum annuum HOM05D000928 ORTHO05D001186 2.1e-15 87.0 156 37.8
Nitab4.5_0006665g0040 Nicotiana tabacum HOM05D000928 ORTHO05D001186 2.1e-15 87.0 156 39.7
Sopen02g031610 Solanum pennellii HOM05D000928 ORTHO05D001186 2.1e-15 87.0 146 41.1
Peaxi162Scf00129g01126 Petunia axillaris HOM05D000928 ORTHO05D001186 6.0e-15 85.5 154 39.6
TWI56G0070 Tripterygium wilfordii HOM05D000928 ORTHO05D001186 1.0e-14 84.7 151 43.0
Thecc.04G009700 Theobroma cacao HOM05D000928 ORTHO05D001186 1.7e-14 84.0 121 47.9
PGSC0003DMG400000523 Solanum tuberosum HOM05D000928 ORTHO05D001186 3.9e-14 82.8 155 38.1
SalBow1G7418 Salvia bowleyana HOM05D000928 ORTHO05D001186 1.1e-13 81.3 120 43.3
Manes.17G120600 Manihot esculenta HOM05D000928 ORTHO05D001186 3.3e-13 79.7 121 43.8
DCAR_011203 Daucus carota HOM05D000928 ORTHO05D001186 7.3e-13 78.6 164 34.8
Duzib187G1892 Durio zibethinus HOM05D000928 ORTHO05D001186 7.3e-13 78.6 119 45.4
Cfa007424 Carpinus fangiana HOM05D000928 ORTHO05D001186 1.2e-12 77.8 150 39.3
Haze_14673 Corylus avellana HOM05D000928 ORTHO05D001186 2.8e-12 76.6 150 40.0
TAR371G0346 Trochodendron aralioides HOM05D000928 ORTHO05D001186 3.6e-12 76.3 152 36.8
Nn4g22782 Nelumbo nucifera HOM05D000928 ORTHO05D001186 8.1e-12 75.1 158 37.3
TAR629G1927 Trochodendron aralioides HOM05D000928 ORTHO05D001186 8.1e-12 75.1 158 36.1
FAN05G3584 Fragaria x ananassa HOM05D000928 ORTHO05D001186 1.4e-11 74.3 191 33.0
Duzib147G0194 Durio zibethinus HOM05D000928 ORTHO05D001186 1.8e-11 73.9 121 43.0
DCAR_021684 Daucus carota HOM05D000928 ORTHO05D001186 3.1e-11 73.2 152 36.8
vmacro18247 Vaccinium macrocarpon HOM05D000928 ORTHO05D001186 3.1e-11 73.2 112 36.6
ECA232G1968 Erigeron canadensis HOM05D000928 ORTHO05D001186 6.8e-11 72.0 136 35.3
HanXRQChr15g0474561 Helianthus annuus HOM05D000928 ORTHO05D001186 6.8e-11 72.0 159 31.4
unitig_899.g15491 Utricularia gibba HOM05D000928 ORTHO05D001186 8.9e-11 71.6 107 40.2
FvH4_6g50730 Fragaria vesca HOM05D000928 ORTHO05D001186 1.2e-10 71.2 191 31.9
FAN02G1427 Fragaria x ananassa HOM05D000928 ORTHO05D001186 1.2e-10 71.2 155 35.5
Lsat_1_v5_gn_0_19300 Lactuca sativa HOM05D000928 ORTHO05D001186 1.2e-10 71.2 129 35.7
RcHm_v2.0_Chr2g0171671 Rosa chinensis HOM05D000928 ORTHO05D001186 1.2e-10 71.2 116 39.7
Gohir.D04G054900 Gossypium hirsutum HOM05D000928 ORTHO05D001186 1.5e-10 70.9 117 44.4
Gorai.012G061500 Gossypium raimondii HOM05D000928 ORTHO05D001186 1.5e-10 70.9 117 44.4
Ciclev10014403m.g Citrus clementina HOM05D000928 ORTHO05D001186 2.6e-10 70.1 125 40.8
GSVIVG01032474001 Vitis vinifera HOM05D000928 ORTHO05D001186 2.6e-10 70.1 160 38.1
Dinv02901 Davidia involucrata HOM05D000928 ORTHO05D001186 3.4e-10 69.7 155 32.9
FAN14G5855 Fragaria x ananassa HOM05D000928 ORTHO05D001186 3.4e-10 69.7 191 31.9
Atru.chr6.2302 Acer truncatum HOM05D000928 ORTHO05D001186 4.4e-10 69.3 156 35.9
arahy.Tifrunner.gnm1.ann1.2PL4X0 Arachis hypogaea HOM05D000928 ORTHO05D001186 4.4e-10 69.3 120 40.8
arahy.Tifrunner.gnm1.ann1.P1I5J2 Arachis hypogaea HOM05D000928 ORTHO05D001186 4.4e-10 69.3 120 40.8
Dinv20660 Davidia involucrata HOM05D000928 ORTHO05D001186 4.4e-10 69.3 153 37.3
Prupe.3G285200 Prunus persica HOM05D000928 ORTHO05D001186 5.8e-10 68.9 117 41.0
Gohir.A05G359300 Gossypium hirsutum HOM05D000928 ORTHO05D001186 7.6e-10 68.6 117 43.6
Phvul.004G014000 Phaseolus vulgaris HOM05D000928 ORTHO05D001186 1.7e-09 67.4 164 35.4
Lsat_1_v5_gn_4_182460 Lactuca sativa HOM05D000928 ORTHO05D001186 2.2e-09 67.0 119 35.3
Psat1g056960 Pisum sativum HOM05D000928 ORTHO05D001186 2.2e-09 67.0 152 36.8
Eucgr.I01797 Eucalyptus grandis HOM05D000928 ORTHO05D001186 2.9e-09 66.6 118 43.2
SGA_v2.0_scaffold205G41693 Striga asiatica HOM05D000928 ORTHO05D001186 2.9e-09 66.6 88 42.0
COL.COLO4_30026 Corchorus olitorius HOM05D000928 ORTHO05D001186 4.9e-09 65.9 154 37.7
ClCG06G016980 Citrullus lanatus HOM05D000928 ORTHO05D001186 6.4e-09 65.5 203 29.1
ECA246G4727 Erigeron canadensis HOM05D000928 ORTHO05D001186 1.1e-08 64.7 108 37.0
Lj2g0009421 Lotus japonicus HOM05D000928 ORTHO05D001186 1.4e-08 64.3 165 37.6
MBI16_g05646_MAGBIO Magnolia biondii HOM05D000928 ORTHO05D001186 1.9e-08 63.9 200 29.0
COL.COLO4_28972 Corchorus olitorius HOM05D000928 ORTHO05D001186 2.4e-08 63.5 122 41.8
Hma1.2p1_0176F.1_g077490 Hydrangea macrophylla HOM05D000928 ORTHO05D001186 2.4e-08 63.5 150 35.3
Ca_04195_v3 Cicer arietinum L. HOM05D000928 ORTHO05D001186 3.2e-08 63.2 151 33.8
VMungo0464G1214 Vigna mungo HOM05D000928 ORTHO05D001186 3.2e-08 63.2 118 41.5
Medtr6g007110 Medicago truncatula HOM05D000928 ORTHO05D001186 4.1e-08 62.8 153 34.6
CsaV3_1G001540 Cucumis sativus L. HOM05D000928 ORTHO05D001186 5.4e-08 62.4 203 28.6
Glyma.05G007800 Glycine max HOM05D000928 ORTHO05D001186 5.4e-08 62.4 125 40.8
PGR142G0168 Punica granatum HOM05D000928 ORTHO05D001186 7.1e-08 62.0 159 35.8
TWI81G0672 Tripterygium wilfordii HOM05D000928 ORTHO05D001186 7.1e-08 62.0 152 34.9
MBI10_g09177_MAGBIO Magnolia biondii HOM05D000928 ORTHO05D001186 9.2e-08 61.6 157 34.4
Oeu004711.1 Olea europaea HOM05D000928 ORTHO05D001186 1.2e-07 61.2 154 33.8
CANSAT80G1303 Cannabis sativa HOM05D000928 ORTHO05D001186 1.6e-07 60.8 150 33.3
Glyma.19G008200 Glycine max HOM05D000928 ORTHO05D001186 1.6e-07 60.8 162 38.3
Sed0024762 Sechium edule HOM05D000928 ORTHO05D001186 1.6e-07 60.8 200 29.0
MD17G1034400 Malus domestica HOM05D000928 ORTHO05D001186 2.1e-07 60.5 146 33.6
Prupe.5G174500 Prunus persica HOM05D000928 ORTHO05D001186 2.1e-07 60.5 150 32.0
QL10p011857 Quercus lobata HOM05D000928 ORTHO05D001186 2.7e-07 60.1 147 34.7
CiPaw.04G025000 Carya illinoinensis HOM05D000928 ORTHO05D001186 4.6e-07 59.3 152 34.9
Duzib205G0481 Durio zibethinus HOM05D000928 ORTHO05D001186 4.6e-07 59.3 152 33.6
RcHm_v2.0_Chr7g0193621 Rosa chinensis HOM05D000928 ORTHO05D001186 4.6e-07 59.3 146 33.6
FAN13G0977 Fragaria x ananassa HOM05D000928 ORTHO05D001186 6.0e-07 58.9 159 30.8
Potri.012G080100 Populus trichocarpa HOM05D000928 ORTHO05D001186 6.0e-07 58.9 173 31.2
Manes.06G104500 Manihot esculenta HOM05D000928 ORTHO05D001186 7.8e-07 58.5 170 30.6
Potri.015G075300 Populus trichocarpa HOM05D000928 ORTHO05D001186 7.8e-07 58.5 126 34.1
CiPaw.03G038400 Carya illinoinensis HOM05D000928 ORTHO05D001186 1.0e-06 58.2 152 36.8
TPR.G2282 Trifolium pratense HOM05D000928 ORTHO05D001186 1.0e-06 58.2 139 36.0
MELO3C017093.2 Cucumis melo HOM05D000928 ORTHO05D001186 1.7e-06 57.4 146 31.5
Migut.H00117 Erythranthe guttata HOM05D000928 ORTHO05D001186 1.7e-06 57.4 120 34.2
Sabra08G0071200 Salix brachista HOM05D000928 ORTHO05D001186 1.7e-06 57.4 144 35.4
Cpa.g.sc124.54 Carica papaya HOM05D000928 ORTHO05D001186 2.3e-06 57.0 154 30.5
Haze_07462 Corylus avellana HOM05D000928 ORTHO05D001186 3.0e-06 56.6 176 30.7
FAN18G2533 Fragaria x ananassa HOM05D000928 ORTHO05D001186 3.9e-06 56.2 154 29.9
Potri.008G094700 Populus trichocarpa HOM05D000928 ORTHO05D001186 5.1e-06 55.8 120 40.8
CANSAT64G2166 Cannabis sativa HOM05D000928 ORTHO05D001186 8.6e-06 55.1 155 34.2


User provided reference genes

Program Settings