Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv04834 Davidia involucrata HOM05D012821 ORTHO05D001422 5.4e-281 970.3 483 100.0
Dinv11092 Davidia involucrata HOM05D012821 ORTHO05D001422 2.1e-139 500.0 392 62.5
Dinv15606 Davidia involucrata HOM05D012821 ORTHO05D001422 9.1e-119 431.4 368 62.0
Dinv18789 Davidia involucrata HOM05D012821 ORTHO05D001422 3.9e-114 416.0 448 47.5
Dinv23016 Davidia involucrata HOM05D012821 ORTHO05D001422 3.9e-77 293.1 293 53.2
Dinv04982 Davidia involucrata HOM05D012821 ORTHO05D001422 6.2e-59 232.6 437 37.1
Dinv06013 Davidia involucrata HOM05D012821 ORTHO05D001422 7.3e-52 209.1 129 72.9
Dinv06004 Davidia involucrata HOM05D012821 ORTHO05D001422 5.6e-44 183.0 290 40.3
Dinv23015 Davidia involucrata HOM05D012821 ORTHO05D008628 1.3e-40 171.8 134 67.2
Sopen05g014240 Solanum pennellii HOM05D000014 ORTHO05D000016 1.8e-29 134.8 315 27.0
Sopen00g005910 Solanum pennellii HOM05D002047 ORTHO05D001422 3.7e-27 127.1 318 29.2
Sopen01g017450 Solanum pennellii HOM05D002047 ORTHO05D001422 6.2e-27 126.3 315 27.0
Sopen03g025130 Solanum pennellii HOM05D000047 ORTHO05D013907 1.4e-26 125.2 330 26.7
Sopen01g005990 Solanum pennellii HOM05D002047 ORTHO05D001422 1.8e-26 124.8 315 29.5
Sopen03g011960 Solanum pennellii HOM05D008695 ORTHO05D001422 2.2e-24 117.9 319 27.0
Sopen10g008400 Solanum pennellii HOM05D000047 ORTHO05D000044 6.5e-24 116.3 333 26.7
Sopen01g015000 Solanum pennellii HOM05D008695 ORTHO05D001422 8.4e-24 115.9 319 26.6
Sopen05g021760 Solanum pennellii HOM05D008695 ORTHO05D001422 8.4e-24 115.9 319 26.6
Sopen01g024350 Solanum pennellii HOM05D000004 ORTHO05D001422 1.6e-22 111.7 337 28.2
PGSC0003DMG400014865 Solanum tuberosum HOM05D008695 ORTHO05D001422 1.6e-22 111.7 305 25.9
Nitab4.5_0001116g0050 Nicotiana tabacum HOM05D002047 ORTHO05D001422 2.1e-22 111.3 298 27.9
PGSC0003DMG400022101 Solanum tuberosum HOM05D008695 ORTHO05D001422 4.6e-22 110.2 288 27.1
Sopen01g024270 Solanum pennellii HOM05D002047 ORTHO05D001422 1.3e-21 108.6 308 27.9
Sopen02g007640 Solanum pennellii HOM05D002047 ORTHO05D001422 3.0e-21 107.5 329 26.7
Sopen08g015910 Solanum pennellii HOM05D000047 ORTHO05D000044 3.9e-21 107.1 294 26.9
Sopen02g002190 Solanum pennellii HOM05D002047 ORTHO05D001422 1.9e-20 104.8 326 26.1
Sopen05g015790 Solanum pennellii HOM05D002047 ORTHO05D001422 1.9e-20 104.8 315 26.7
Sopen05g014510 Solanum pennellii HOM05D002047 ORTHO05D001422 2.5e-20 104.4 329 25.5
Sopen06g021480 Solanum pennellii HOM05D009746 ORTHO05D008561 2.5e-20 104.4 343 25.4
Nitab4.5_0004456g0030 Nicotiana tabacum HOM05D002047 ORTHO05D001422 4.3e-20 103.6 307 27.0
Sopen08g011480 Solanum pennellii HOM05D008695 ORTHO05D001422 4.3e-20 103.6 299 27.4
Sopen04g017310 Solanum pennellii HOM05D008695 ORTHO05D001422 5.7e-20 103.2 303 26.7
Sopen05g013180 Solanum pennellii HOM05D002047 ORTHO05D001422 7.4e-20 102.8 327 26.3
Sopen11g020140 Solanum pennellii HOM05D002047 ORTHO05D001422 7.4e-20 102.8 333 26.1
Sopen03g011910 Solanum pennellii HOM05D008695 ORTHO05D001422 9.7e-20 102.4 300 26.7
Sopen01g005980 Solanum pennellii HOM05D002047 ORTHO05D001422 2.2e-19 101.3 267 29.2
PGSC0003DMG400016492 Solanum tuberosum HOM05D002047 ORTHO05D001422 2.2e-19 101.3 201 28.9
Sopen03g015690 Solanum pennellii HOM05D008695 ORTHO05D001422 3.7e-19 100.5 287 28.2
Sopen07g013820 Solanum pennellii HOM05D000047 ORTHO05D001422 4.8e-19 100.1 330 27.0
Sopen07g016250 Solanum pennellii HOM05D002047 ORTHO05D001422 4.8e-19 100.1 324 24.7
Nitab4.5_0005061g0030 Nicotiana tabacum HOM05D008440 ORTHO05D001422 6.3e-19 99.8 164 34.1
Nitab4.5_0010485g0010 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.1e-18 99.0 294 27.2
Nitab4.5_0000652g0010 Nicotiana tabacum HOM05D008440 ORTHO05D001422 1.4e-18 98.6 164 33.5
Sopen07g015290 Solanum pennellii HOM05D008695 ORTHO05D001422 1.4e-18 98.6 286 25.9
Nitab4.5_0000522g0120 Nicotiana tabacum HOM05D008440 ORTHO05D001422 1.8e-18 98.2 162 33.3
PGSC0003DMG400027483 Solanum tuberosum HOM05D009746 ORTHO05D008561 3.1e-18 97.4 310 25.5
Nitab4.5_0003114g0030 Nicotiana tabacum HOM05D002047 ORTHO05D001422 5.3e-18 96.7 335 24.8
Sopen06g007780 Solanum pennellii HOM05D009746 ORTHO05D008561 5.3e-18 96.7 343 25.1
Cc00_g02530 Coffea canephora HOM05D008695 ORTHO05D001422 2.0e-17 94.7 288 26.0
Thecc.10G137400 Theobroma cacao HOM05D002881 ORTHO05D002983 2.6e-17 94.4 346 24.3
Sopen06g009410 Solanum pennellii HOM05D007487 ORTHO05D008561 3.4e-17 94.0 343 25.7
Sopen03g025020 Solanum pennellii HOM05D007487 ORTHO05D008561 4.5e-17 93.6 343 24.8
Dinv04418 Davidia involucrata HOM05D012821 ORTHO05D001422 1.0e-16 92.4 91 50.5
Sopen05g011410 Solanum pennellii HOM05D004926 ORTHO05D013907 1.0e-16 92.4 172 30.8
Dinv05536 Davidia involucrata HOM05D012821 ORTHO05D001422 1.7e-16 91.7 58 69.0
Sopen07g008910 Solanum pennellii HOM05D007487 ORTHO05D008561 2.2e-16 91.3 343 23.6
Sopen05g014630 Solanum pennellii HOM05D007487 ORTHO05D008561 3.8e-16 90.5 343 24.2
Sopen02g010520 Solanum pennellii HOM05D007487 ORTHO05D008561 5.0e-16 90.1 343 24.8
Sopen11g019410 Solanum pennellii HOM05D002047 ORTHO05D001422 6.5e-16 89.7 208 30.8
Nitab4.5_0006110g0070 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.1e-15 89.0 219 31.5
Sopen12g015700 Solanum pennellii HOM05D008695 ORTHO05D001422 1.4e-15 88.6 241 27.4
Sopen01g041930 Solanum pennellii HOM05D007487 ORTHO05D008561 1.9e-15 88.2 345 26.1
Sopen03g009300 Solanum pennellii HOM05D004926 ORTHO05D013907 1.9e-15 88.2 157 35.0
Sopen01g015240 Solanum pennellii HOM05D007487 ORTHO05D008561 3.2e-15 87.4 343 23.6
Nitab4.5_0003519g0050 Nicotiana tabacum HOM05D002047 ORTHO05D001422 4.2e-15 87.0 219 31.1
Nitab4.5_0000068g0110 Nicotiana tabacum HOM05D004926 ORTHO05D006375 7.2e-15 86.3 172 29.1
Nitab4.5_0012693g0020 Nicotiana tabacum HOM05D002047 ORTHO05D001422 7.2e-15 86.3 275 25.8
Sopen09g018960 Solanum pennellii HOM05D002047 ORTHO05D001422 7.2e-15 86.3 234 28.2
Nitab4.5_0000039g0040 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.6e-14 85.1 307 25.4
Sopen05g012170 Solanum pennellii HOM05D002047 ORTHO05D001422 2.1e-14 84.7 309 24.9
Sopen08g007700 Solanum pennellii HOM05D000004 ORTHO05D000002 2.1e-14 84.7 259 25.9
Sopen09g007730 Solanum pennellii HOM05D008695 ORTHO05D001422 2.1e-14 84.7 223 26.0
Nitab4.5_0000199g0080 Nicotiana tabacum HOM05D004926 ORTHO05D006375 7.9e-14 82.8 212 27.8
Sopen06g009860 Solanum pennellii HOM05D002047 ORTHO05D001422 7.9e-14 82.8 231 26.8
Sopen07g017300 Solanum pennellii HOM05D008695 ORTHO05D001422 7.9e-14 82.8 239 25.9
Sopen12g021080 Solanum pennellii HOM05D000047 ORTHO05D001422 1.4e-13 82.0 273 24.5
Dinv06014 Davidia involucrata HOM05D013497 ORTHO05D008628 1.8e-13 81.6 60 68.3
Nitab4.5_0000605g0190 Nicotiana tabacum HOM05D002047 ORTHO05D001422 3.9e-13 80.5 217 30.9
Nitab4.5_0013909g0010 Nicotiana tabacum HOM05D002047 ORTHO05D001422 3.9e-13 80.5 301 25.9
Sopen01g024730 Solanum pennellii HOM05D002047 ORTHO05D001422 3.9e-13 80.5 224 28.1
Nitab4.5_0011907g0020 Nicotiana tabacum HOM05D002047 ORTHO05D001422 5.1e-13 80.1 272 25.0
Sopen04g022160 Solanum pennellii HOM05D002047 ORTHO05D001422 5.1e-13 80.1 164 34.8
CAN.G574.11 Capsicum annuum HOM05D000265 ORTHO05D001422 6.7e-13 79.7 212 30.7
Sopen01g006870 Solanum pennellii HOM05D002047 ORTHO05D001422 8.8e-13 79.3 167 32.3
Sopen12g021750 Solanum pennellii HOM05D000047 ORTHO05D000044 1.1e-12 79.0 157 31.2
Nitab4.5_0005039g0010 Nicotiana tabacum HOM05D002047 ORTHO05D001422 2.5e-12 77.8 303 23.1
Thecc.05G210100 Theobroma cacao HOM05D002881 ORTHO05D002983 2.5e-12 77.8 271 24.7
Sopen11g013600 Solanum pennellii HOM05D008695 ORTHO05D001422 3.3e-12 77.4 157 31.2
Nitab4.5_0000093g0030 Nicotiana tabacum HOM05D002047 ORTHO05D001422 5.7e-12 76.6 203 29.1
Sopen07g009220 Solanum pennellii HOM05D008695 ORTHO05D001422 5.7e-12 76.6 157 30.6
MELO3C025327.2 Cucumis melo HOM05D002881 ORTHO05D002983 9.7e-12 75.9 237 27.8
Nitab4.5_0002542g0100 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.3e-11 75.5 140 32.1
Nitab4.5_0004952g0010 Nicotiana tabacum HOM05D008440 ORTHO05D001422 1.3e-11 75.5 153 31.4
Nitab4.5_0008253g0020 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.3e-11 75.5 210 27.6
Sopen12g018750 Solanum pennellii HOM05D007487 ORTHO05D008561 1.3e-11 75.5 340 22.4
Sopen09g022070 Solanum pennellii HOM05D000047 ORTHO05D001422 2.2e-11 74.7 162 27.2
Nitab4.5_0024891g0020 Nicotiana tabacum HOM05D008440 ORTHO05D001422 2.8e-11 74.3 199 25.6
Sopen04g020150 Solanum pennellii HOM05D002047 ORTHO05D001422 2.8e-11 74.3 154 34.4
Sopen07g011120 Solanum pennellii HOM05D002047 ORTHO05D001422 2.8e-11 74.3 233 26.2
Nitab4.5_0000643g0040 Nicotiana tabacum HOM05D004926 ORTHO05D006375 3.7e-11 73.9 228 24.6
Sopen10g022130 Solanum pennellii HOM05D000047 ORTHO05D000589 3.7e-11 73.9 208 25.5
Nitab4.5_0007252g0030 Nicotiana tabacum HOM05D002047 ORTHO05D001422 4.8e-11 73.6 191 29.8
Nitab4.5_0007526g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 4.8e-11 73.6 145 30.3
Sopen09g022420 Solanum pennellii HOM05D002047 ORTHO05D001422 4.8e-11 73.6 123 34.1
TWI53G0826 Tripterygium wilfordii HOM05D002881 ORTHO05D002983 4.8e-11 73.6 274 24.8
Nitab4.5_0001431g0030 Nicotiana tabacum HOM05D002047 ORTHO05D001422 6.3e-11 73.2 202 30.7
Nitab4.5_0026237g0010 Nicotiana tabacum HOM05D008440 ORTHO05D001422 6.3e-11 73.2 125 32.8
Sopen04g013010 Solanum pennellii HOM05D008695 ORTHO05D001422 8.2e-11 72.8 157 28.0
Sopen10g027680 Solanum pennellii HOM05D004926 ORTHO05D013907 8.2e-11 72.8 127 31.5
Nitab4.5_0010052g0010 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.1e-10 72.4 297 22.9
Nitab4.5_0000775g0180 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.4e-10 72.0 220 25.5
Nitab4.5_0001338g0120 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.8e-10 71.6 226 24.8
Sopen05g027550 Solanum pennellii HOM05D000047 ORTHO05D000044 1.8e-10 71.6 313 24.0
Sopen11g018120 Solanum pennellii HOM05D008695 ORTHO05D001422 1.8e-10 71.6 159 28.9
Sopen11g022360 Solanum pennellii HOM05D007487 ORTHO05D008561 1.8e-10 71.6 278 24.8
Sopen01g013960 Solanum pennellii HOM05D008695 ORTHO05D001422 4.1e-10 70.5 149 29.5
Nitab4.5_0000342g0240 Nicotiana tabacum HOM05D008440 ORTHO05D001422 5.3e-10 70.1 171 27.5
Sopen05g014650 Solanum pennellii HOM05D007487 ORTHO05D008561 5.3e-10 70.1 306 22.2
Sopen11g022440 Solanum pennellii HOM05D000047 ORTHO05D000589 6.9e-10 69.7 142 29.6
Nitab4.5_0000235g0070 Nicotiana tabacum HOM05D008440 ORTHO05D001422 1.2e-09 68.9 161 27.3
Gorai.001G080800 Gossypium raimondii HOM05D002881 ORTHO05D002983 1.5e-09 68.6 249 25.7
vmacro10773 Vaccinium macrocarpon HOM05D015182 ORTHO05D000827 1.5e-09 68.6 309 21.7
Ca_07212_v3 Cicer arietinum L. HOM05D002881 ORTHO05D002983 2.6e-09 67.8 299 21.1
QL04p096945 Quercus lobata HOM05D013472 ORTHO05D002983 2.6e-09 67.8 219 24.2
Nitab4.5_0001843g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 3.4e-09 67.4 206 25.7
Sopen08g023600 Solanum pennellii HOM05D000047 ORTHO05D000044 3.4e-09 67.4 324 23.1
Nitab4.5_0000427g0020 Nicotiana tabacum HOM05D002047 ORTHO05D001422 4.5e-09 67.0 306 22.2
Nitab4.5_0007845g0040 Nicotiana tabacum HOM05D002047 ORTHO05D001422 4.5e-09 67.0 129 31.8
MBI18_g15614_MAGBIO Magnolia biondii HOM05D003711 ORTHO05D001786 7.7e-09 66.2 303 24.4
Thecc.02G286200 Theobroma cacao HOM05D002881 ORTHO05D002983 7.7e-09 66.2 331 21.8
MBI16_g17764_MAGBIO Magnolia biondii HOM05D003711 ORTHO05D001786 1.0e-08 65.9 273 26.4
vmacro21216 Vaccinium macrocarpon HOM05D015182 ORTHO05D000827 1.0e-08 65.9 249 22.9
Sopen06g012970 Solanum pennellii HOM05D007487 ORTHO05D008561 1.3e-08 65.5 185 24.9
vmacro16092 Vaccinium macrocarpon HOM05D001028 ORTHO05D000827 1.3e-08 65.5 270 24.1
Nitab4.5_0002183g0080 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.7e-08 65.1 189 27.0
Nitab4.5_0005665g0030 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.7e-08 65.1 129 29.5
Sopen01g007610 Solanum pennellii HOM05D002047 ORTHO05D001422 1.7e-08 65.1 275 21.8
Dinv18284 Davidia involucrata HOM05D012821 ORTHO05D001422 2.2e-08 64.7 48 68.8
Sopen01g020530 Solanum pennellii HOM05D000047 ORTHO05D000044 2.2e-08 64.7 133 30.1
TAR275G0001 Trochodendron aralioides HOM05D032489 ORTHO05D001786 2.2e-08 64.7 274 24.5
Nitab4.5_0001339g0180 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.9e-08 64.3 141 27.7
Sopen01g011270 Solanum pennellii HOM05D000014 ORTHO05D000016 3.8e-08 63.9 258 22.9
Sopen05g025210 Solanum pennellii HOM05D007487 ORTHO05D008561 3.8e-08 63.9 132 28.0
TPR.G35764 Trifolium pratense HOM05D002881 ORTHO05D002983 5.0e-08 63.5 270 20.7
Gorai.002G202700 Gossypium raimondii HOM05D002881 ORTHO05D002983 6.5e-08 63.2 170 25.3
Nitab4.5_0000235g0080 Nicotiana tabacum HOM05D008440 ORTHO05D001422 8.5e-08 62.8 111 34.2
TWI79G0344 Tripterygium wilfordii HOM05D002881 ORTHO05D002983 8.5e-08 62.8 181 23.8
Sopen06g007040 Solanum pennellii HOM05D002047 ORTHO05D001422 1.1e-07 62.4 104 30.8
Medtr5g046540 Medicago truncatula HOM05D002881 ORTHO05D002983 1.4e-07 62.0 292 21.6
QL09p053831 Quercus lobata HOM05D010068 ORTHO05D010968 1.9e-07 61.6 195 27.7
Sopen01g022050 Solanum pennellii HOM05D000014 ORTHO05D000589 1.9e-07 61.6 185 25.4
MBI17_g01773_MAGBIO Magnolia biondii HOM05D003711 ORTHO05D001786 2.5e-07 61.2 212 24.5
Sopen01g024220 Solanum pennellii HOM05D007487 ORTHO05D008561 2.5e-07 61.2 155 27.7
Dinv18283 Davidia involucrata HOM05D012821 ORTHO05D001422 3.2e-07 60.8 85 45.9
Medtr3g452070 Medicago truncatula HOM05D002881 ORTHO05D002983 3.2e-07 60.8 282 22.0
Medtr8g054530 Medicago truncatula HOM05D002881 ORTHO05D002983 3.2e-07 60.8 290 21.4
Nitab4.5_0001955g0130 Nicotiana tabacum HOM05D008440 ORTHO05D001422 3.2e-07 60.8 109 33.0
Sopen04g012100 Solanum pennellii HOM05D000047 ORTHO05D000044 4.2e-07 60.5 216 25.9
Sopen08g008690 Solanum pennellii HOM05D000002 ORTHO05D000001 4.2e-07 60.5 329 22.2
Nitab4.5_0000087g0200 Nicotiana tabacum HOM05D002047 ORTHO05D001422 5.5e-07 60.1 103 35.0
Sopen01g020100 Solanum pennellii HOM05D007487 ORTHO05D008561 5.5e-07 60.1 169 27.2
PGSC0003DMG400026889 Solanum tuberosum HOM05D007487 ORTHO05D008561 5.5e-07 60.1 197 26.4
MBI08_g06888_MAGBIO Magnolia biondii HOM05D003711 ORTHO05D001786 9.4e-07 59.3 267 25.5
Medtr2g082450 Medicago truncatula HOM05D002881 ORTHO05D002983 9.4e-07 59.3 290 21.7
Sopen01g015110 Solanum pennellii HOM05D000047 ORTHO05D000044 9.4e-07 59.3 133 27.8
Gorai.010G160500 Gossypium raimondii HOM05D002881 ORTHO05D002983 1.2e-06 58.9 301 22.9
Nitab4.5_0002031g0150 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.2e-06 58.9 163 28.8
Nitab4.5_0001202g0020 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.6e-06 58.5 189 28.6
Nitab4.5_0002276g0030 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.6e-06 58.5 128 28.9
Sopen12g014280 Solanum pennellii HOM05D000182 ORTHO05D001422 1.6e-06 58.5 207 25.1
Nitab4.5_0006429g0010 Nicotiana tabacum HOM05D002047 ORTHO05D001422 2.1e-06 58.2 143 29.4
MELO3C028745.2 Cucumis melo HOM05D002881 ORTHO05D002983 2.7e-06 57.8 235 25.1
Nitab4.5_0001619g0130 Nicotiana tabacum HOM05D002047 ORTHO05D001422 2.7e-06 57.8 153 28.1
Nitab4.5_0005994g0090 Nicotiana tabacum HOM05D002047 ORTHO05D001422 2.7e-06 57.8 67 40.3
Sopen07g005430 Solanum pennellii HOM05D009746 ORTHO05D008561 2.7e-06 57.8 141 27.7
Nitab4.5_0000023g0250 Nicotiana tabacum HOM05D002047 ORTHO05D001422 4.7e-06 57.0 67 40.3
Nitab4.5_0028309g0010 Nicotiana tabacum HOM05D002047 ORTHO05D001422 4.7e-06 57.0 62 41.9
Sopen03g025980 Solanum pennellii HOM05D010031 ORTHO05D012898 6.1e-06 56.6 129 26.4
Sopen04g011230 Solanum pennellii HOM05D000014 ORTHO05D000589 6.1e-06 56.6 126 27.8
Nitab4.5_0003734g0020 Nicotiana tabacum HOM05D002047 ORTHO05D001422 7.9e-06 56.2 172 26.2
Nitab4.5_0009584g0010 Nicotiana tabacum HOM05D002047 ORTHO05D001422 7.9e-06 56.2 166 27.7


User provided reference genes

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