Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv04806 Davidia involucrata HOM05D000251 ORTHO05D005532 6.3e-61 237.3 122 100.0
Thecc.02G183800 Theobroma cacao HOM05D000251 ORTHO05D005532 1.6e-35 152.9 88 88.6
Duzib132G0720 Durio zibethinus HOM05D000251 ORTHO05D005532 2.7e-35 152.1 88 88.6
Lj8C560G4 Lonicera japonica HOM05D000251 ORTHO05D005532 2.7e-35 152.1 88 88.6
Actinidia11011 Actinidia chinensis HOM05D000251 ORTHO05D005532 3.5e-35 151.8 88 87.5
Atru.chr6.2885 Acer truncatum HOM05D000251 ORTHO05D005532 6.0e-35 151.0 88 87.5
Atru.chr6.2947 Acer truncatum HOM05D000251 ORTHO05D005532 6.0e-35 151.0 88 87.5
Oeu053660.3 Olea europaea HOM05D000251 ORTHO05D005532 7.8e-35 150.6 88 85.2
COL.COLO4_05022 Corchorus olitorius HOM05D000251 ORTHO05D005532 1.0e-34 150.2 88 87.5
vmacro09254 Vaccinium macrocarpon HOM05D000251 ORTHO05D005532 2.3e-34 149.1 88 85.2
AL8G15780 Arabidopsis lyrata HOM05D000251 ORTHO05D005532 3.0e-34 148.7 88 83.0
PGSC0003DMG400009218 Solanum tuberosum HOM05D000251 ORTHO05D005532 3.0e-34 148.7 88 86.4
Thhalv10003135m.g Eutrema salsugineum HOM05D000251 ORTHO05D005532 3.9e-34 148.3 88 83.0
Rhsim04G0070600 Rhododendron simsii HOM05D000251 ORTHO05D005532 3.9e-34 148.3 88 85.2
TAR627G0503 Trochodendron aralioides HOM05D000251 ORTHO05D005532 3.9e-34 148.3 88 86.4
AT5G44240 Arabidopsis thaliana HOM05D000251 ORTHO05D005532 5.1e-34 147.9 88 81.8
MD17G1235400 Malus domestica HOM05D000251 ORTHO05D005532 6.6e-34 147.5 88 83.0
Sc12g0003170 Simmondsia chinensis HOM05D000251 ORTHO05D005532 6.6e-34 147.5 88 83.0
VMungo1080G0767 Vigna mungo HOM05D000251 ORTHO05D005532 6.6e-34 147.5 86 84.9
GSVIVG01020583001 Vitis vinifera HOM05D000251 ORTHO05D005532 8.6e-34 147.1 88 84.1
Glyma.12G205800 Glycine max HOM05D000251 ORTHO05D005532 1.1e-33 146.7 88 81.8
MD09G1243400 Malus domestica HOM05D000251 ORTHO05D005532 1.5e-33 146.4 88 81.8
Cpa.g.sc83.76 Carica papaya HOM05D000251 ORTHO05D005532 1.9e-33 146.0 88 84.1
Eucgr.K01048 Eucalyptus grandis HOM05D000251 ORTHO05D005532 2.5e-33 145.6 88 81.8
Lj3g0007891 Lotus japonicus HOM05D000251 ORTHO05D005532 2.5e-33 145.6 88 83.0
CARHR178990 Cardamine hirsuta HOM05D000251 ORTHO05D005532 4.3e-33 144.8 88 81.8
CAN.G61.27 Capsicum annuum HOM05D000251 ORTHO05D005532 7.3e-33 144.1 88 84.1
Lalb_Chr14g0367081 Lupinus albus HOM05D000251 ORTHO05D005532 7.3e-33 144.1 88 81.8
THA.LOC104826038 Tarenaya hassleriana HOM05D000251 ORTHO05D005532 7.3e-33 144.1 105 71.4
PGR142G3105 Punica granatum HOM05D000251 ORTHO05D005532 9.6e-33 143.7 88 80.7
Sp2g09050 Schrenkiella parvula HOM05D000251 ORTHO05D005532 1.2e-32 143.3 88 80.7
Migut.A00166 Erythranthe guttata HOM05D000251 ORTHO05D005532 1.6e-32 142.9 89 84.3
Cfa004459 Carpinus fangiana HOM05D000251 ORTHO05D005532 2.1e-32 142.5 88 85.2
CiPaw.04G127700 Carya illinoinensis HOM05D000251 ORTHO05D005532 2.1e-32 142.5 88 85.2
Haze_13211 Corylus avellana HOM05D000251 ORTHO05D005532 2.1e-32 142.5 88 85.2
Haze_13212 Corylus avellana HOM05D000251 ORTHO05D005532 2.1e-32 142.5 88 85.2
FAN08G1506 Fragaria x ananassa HOM05D000251 ORTHO05D005532 2.1e-32 142.5 88 79.5
RcHm_v2.0_Chr7g0223111 Rosa chinensis HOM05D000251 ORTHO05D005532 2.1e-32 142.5 88 80.7
Ca_09441_v3 Cicer arietinum L. HOM05D000251 ORTHO05D005532 2.8e-32 142.1 88 79.5
Phvul.005G101400 Phaseolus vulgaris HOM05D000251 ORTHO05D005532 2.8e-32 142.1 103 70.9
Sopen11g009100 Solanum pennellii HOM05D000251 ORTHO05D005532 2.8e-32 142.1 88 83.0
Ciclev10014095m.g Citrus clementina HOM05D000251 ORTHO05D005532 3.6e-32 141.7 88 81.8
Glyma.13G295100 Glycine max HOM05D000251 ORTHO05D005532 3.6e-32 141.7 88 80.7
Glyma.19G138500 Glycine max HOM05D000251 ORTHO05D005532 3.6e-32 141.7 88 80.7
Peaxi162Scf00495g00120 Petunia axillaris HOM05D000251 ORTHO05D005532 3.6e-32 141.7 88 80.7
BcaC03g16645 Brassica carinata HOM05D000251 ORTHO05D005532 4.7e-32 141.4 88 77.3
C02p44780 Brassica napus HOM05D000251 ORTHO05D005532 4.7e-32 141.4 88 77.3
CANSAT64G2637 Cannabis sativa HOM05D000251 ORTHO05D005532 4.7e-32 141.4 91 79.1
Nitab4.5_0000159g0190 Nicotiana tabacum HOM05D000251 ORTHO05D005532 4.7e-32 141.4 88 81.8
TPR.G6498 Trifolium pratense HOM05D000251 ORTHO05D005532 4.7e-32 141.4 88 80.7
BolC2t10522H Brassica oleracea HOM05D000251 ORTHO05D005532 6.2e-32 141.0 88 76.1
FvH4_5g29681 Fragaria vesca HOM05D000251 ORTHO05D005532 6.2e-32 141.0 88 79.5
FAN04G0170 Fragaria x ananassa HOM05D000251 ORTHO05D005532 6.2e-32 141.0 88 79.5
DCAR_004456 Daucus carota HOM05D000251 ORTHO05D005532 8.1e-32 140.6 86 82.6
Gohir.A12G139000 Gossypium hirsutum HOM05D000251 ORTHO05D005532 1.1e-31 140.2 89 82.0
Gorai.008G154700 Gossypium raimondii HOM05D000251 ORTHO05D005532 1.1e-31 140.2 89 82.0
Nitab4.5_0006666g0010 Nicotiana tabacum HOM05D000251 ORTHO05D005532 1.1e-31 140.2 88 80.7
Actinidia30461 Actinidia chinensis HOM05D000251 ORTHO05D005532 1.4e-31 139.8 88 81.8
Carub.0008s0428 Capsella rubella HOM05D000251 ORTHO05D005532 1.4e-31 139.8 88 78.4
QL08p039799 Quercus lobata HOM05D000251 ORTHO05D005532 1.4e-31 139.8 89 84.3
Medtr2g090610 Medicago truncatula HOM05D000251 ORTHO05D005532 1.8e-31 139.4 88 78.4
C02p44810 Brassica napus HOM05D000251 ORTHO05D005532 2.4e-31 139.0 88 75.0
Gohir.D12G143400 Gossypium hirsutum HOM05D000251 ORTHO05D005532 3.1e-31 138.7 89 80.9
Aa31LG5G3020 Aethionema arabicum HOM05D000251 ORTHO05D005532 4.0e-31 138.3 88 78.4
arahy.Tifrunner.gnm1.ann1.28NLID Arachis hypogaea HOM05D000251 ORTHO05D005532 4.0e-31 138.3 89 79.8
MSTRG.25929 Avicennia marina HOM05D000251 ORTHO05D005532 4.0e-31 138.3 88 80.7
Sabra17G0010900 Salix brachista HOM05D000251 ORTHO05D005532 5.2e-31 137.9 88 80.7
Hund12502 Selenicereus undatus HOM05D000251 ORTHO05D005532 5.2e-31 137.9 88 78.4
Lalb_Chr24g0399961 Lupinus albus HOM05D000251 ORTHO05D005532 1.5e-30 136.3 84 81.0
MBI15_g37780_MAGBIO Magnolia biondii HOM05D000251 ORTHO05D005532 2.6e-30 135.6 88 76.1
Manes.13G143600 Manihot esculenta HOM05D000251 ORTHO05D005532 2.6e-30 135.6 88 80.7
DCAR_000770 Daucus carota HOM05D000251 ORTHO05D005532 3.4e-30 135.2 88 76.1
BcaB07g30538 Brassica carinata HOM05D000251 ORTHO05D005532 4.4e-30 134.8 90 78.9
Hund20061 Selenicereus undatus HOM05D000251 ORTHO05D005532 4.4e-30 134.8 88 73.9
Aqoxy4G02325 Aquilegia oxysepala HOM05D000251 ORTHO05D005532 1.3e-29 133.3 92 75.0
SalBow7G3451 Salvia bowleyana HOM05D000251 ORTHO05D005532 1.3e-29 133.3 89 78.7
EL10Ac2g03351 Beta vulgaris HOM05D000251 ORTHO05D005532 1.7e-29 132.9 88 75.0
CsaV3_7G005820 Cucumis sativus L. HOM05D000251 ORTHO05D005532 1.7e-29 132.9 87 75.9
Nn7g36698 Nelumbo nucifera HOM05D000251 ORTHO05D005532 2.2e-29 132.5 106 67.9
PSO675G3162 Papaver somniferum HOM05D000251 ORTHO05D005532 2.9e-29 132.1 91 75.8
Ah.16g106630 Amaranthus hybridus HOM05D000251 ORTHO05D005532 3.8e-29 131.7 88 75.0
CAN.G370.20 Capsicum annuum HOM05D000251 ORTHO05D005532 3.8e-29 131.7 80 85.0
ClCG07G002540 Citrullus lanatus HOM05D000251 ORTHO05D005532 3.8e-29 131.7 87 75.9
PSO541G3054 Papaver somniferum HOM05D000251 ORTHO05D005532 3.8e-29 131.7 91 74.7
Potri.017G013500 Populus trichocarpa HOM05D000251 ORTHO05D005532 4.9e-29 131.3 89 79.8
MELO3C018710.2 Cucumis melo HOM05D000251 ORTHO05D005532 8.4e-29 130.6 87 74.7
BcaC06g34580 Brassica carinata HOM05D000251 ORTHO05D005532 1.1e-28 130.2 88 75.0
A06p47370 Brassica napus HOM05D000251 ORTHO05D005532 1.1e-28 130.2 88 75.0
BolC7t43218H Brassica oleracea HOM05D000251 ORTHO05D005532 1.1e-28 130.2 88 75.0
BraA06t27607Z Brassica rapa HOM05D000251 ORTHO05D005532 1.1e-28 130.2 88 75.0
Lsat_1_v5_gn_5_44941 Lactuca sativa HOM05D000251 ORTHO05D005532 1.1e-28 130.2 95 76.8
C07p26900 Brassica napus HOM05D000251 ORTHO05D005532 1.9e-28 129.4 88 75.0
HanXRQChr03g0078711 Helianthus annuus HOM05D000251 ORTHO05D005532 1.2e-27 126.7 91 78.0
AUR62032107 Chenopodium quinoa HOM05D000251 ORTHO05D005532 7.8e-27 124.0 88 72.7
AUR62042419 Chenopodium quinoa HOM05D000251 ORTHO05D005532 1.3e-26 123.2 88 71.6
arahy.Tifrunner.gnm1.ann1.97SJFR Arachis hypogaea HOM05D000251 ORTHO05D005532 2.3e-26 122.5 89 74.2
ATR0697G110 Amborella trichopoda HOM05D000251 ORTHO05D005532 7.3e-25 117.5 88 68.2
Sed0000387 Sechium edule HOM05D000251 ORTHO05D005532 4.8e-24 114.8 89 69.7
CSS0015858 Camellia sinensis var. sinensis HOM05D000251 ORTHO05D005532 1.1e-23 113.6 84 73.8
ECA240G1856 Erigeron canadensis HOM05D000251 ORTHO05D005532 6.9e-23 110.9 67 83.6
CSS0026318 Camellia sinensis var. sinensis HOM05D000251 ORTHO05D005532 3.4e-22 108.6 84 70.2
Sed0009923 Sechium edule HOM05D000251 ORTHO05D005532 2.9e-21 105.5 88 65.9
unitig_32.g11477 Utricularia gibba HOM05D000251 ORTHO05D005532 4.9e-21 104.8 88 59.1
Hma1.2p1_1917F.1_g307480 Hydrangea macrophylla HOM05D000251 ORTHO05D005532 1.9e-20 102.8 65 86.2
Os11g0446500 Oryza sativa ssp. japonica HOM05D000251 ORTHO05D005532 6.0e-19 97.8 88 62.5
Zm00001eb326010 Zea mays HOM05D000251 ORTHO05D005532 1.5e-17 93.2 88 59.1
Mapoly0005s0144 Marchantia polymorpha HOM05D000251 ORTHO05D005532 8.7e-10 67.4 89 46.1
Os04g0353000 Oryza sativa ssp. japonica HOM05D000251 ORTHO05D005532 4.3e-09 65.1 79 48.1
Zm00001eb420520 Zea mays HOM05D000251 ORTHO05D005532 4.8e-08 61.6 86 43.0
AagrBONN_evm.TU.Sc2ySwM_117.621 Anthoceros agrestis HOM05D000251 ORTHO05D005532 4.0e-07 58.5 89 40.4


User provided reference genes

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