Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv04699 Davidia involucrata HOM05D007481 ORTHO05D009444 1.6e-146 522.7 250 100.0
CSS0016102 Camellia sinensis var. sinensis HOM05D007481 ORTHO05D009444 9.8e-125 450.3 247 85.0
Actinidia11588 Actinidia chinensis HOM05D007481 ORTHO05D009444 1.2e-119 433.3 247 81.8
Gohir.D09G160700 Gossypium hirsutum HOM05D007481 ORTHO05D009444 4.6e-114 414.8 249 77.1
Thecc.05G016400 Theobroma cacao HOM05D007481 ORTHO05D009444 9.5e-112 407.1 252 76.6
TWI74G0365 Tripterygium wilfordii HOM05D007481 ORTHO05D009444 2.1e-111 406.0 246 76.8
GSVIVG01033961001 Vitis vinifera HOM05D007481 ORTHO05D009444 2.1e-111 406.0 246 77.2
CiPaw.10G156500 Carya illinoinensis HOM05D007481 ORTHO05D009444 2.8e-111 405.6 249 76.7
QL07p035708 Quercus lobata HOM05D007481 ORTHO05D009444 2.8e-111 405.6 249 77.9
Manes.09G104600 Manihot esculenta HOM05D007481 ORTHO05D009444 2.3e-110 402.5 245 79.2
Cc06_g01380 Coffea canephora HOM05D007481 ORTHO05D009444 3.1e-110 402.1 246 77.6
PGSC0003DMG400011097 Solanum tuberosum HOM05D007481 ORTHO05D009444 6.8e-110 401.0 247 75.7
Solyc10g085160.2 Solanum lycopersicum HOM05D007481 ORTHO05D009444 5.8e-109 397.9 247 75.3
Gorai.006G182400 Gossypium raimondii HOM05D007481 ORTHO05D009444 9.8e-109 397.1 284 67.6
Sopen10g034630 Solanum pennellii HOM05D007481 ORTHO05D009444 9.8e-109 397.1 247 75.3
CAN.G616.2 Capsicum annuum HOM05D007481 ORTHO05D009444 1.3e-108 396.7 247 75.7
FAN05G5358 Fragaria x ananassa HOM05D007481 ORTHO05D009444 1.3e-108 396.7 247 76.1
Prupe.6G277100 Prunus persica HOM05D007481 ORTHO05D009444 2.2e-108 396.0 244 77.0
RcHm_v2.0_Chr3g0463171 Rosa chinensis HOM05D007481 ORTHO05D009444 2.2e-108 396.0 247 75.7
MD04G1152000 Malus domestica HOM05D007481 ORTHO05D009444 2.9e-108 395.6 246 74.8
Cfa017210 Carpinus fangiana HOM05D007481 ORTHO05D009444 4.9e-108 394.8 229 79.0
Peaxi162Scf00009g01813 Petunia axillaris HOM05D007481 ORTHO05D009444 4.9e-108 394.8 247 74.9
Potri.006G100100 Populus trichocarpa HOM05D007481 ORTHO05D009444 4.9e-108 394.8 249 76.7
Nitab4.5_0003666g0020 Nicotiana tabacum HOM05D007481 ORTHO05D009444 1.4e-107 393.3 246 76.8
MSTRG.10219 Avicennia marina HOM05D007481 ORTHO05D009444 1.2e-106 390.2 255 72.9
COL.COLO4_14539 Corchorus olitorius HOM05D007481 ORTHO05D009444 1.2e-106 390.2 256 73.4
Eucgr.B02817 Eucalyptus grandis HOM05D007481 ORTHO05D009444 1.0e-105 387.1 250 74.4
SGA_v2.0_scaffold240G44095 Striga asiatica HOM05D003907 ORTHO05D004819 6.6e-105 384.4 242 75.6
Nitab4.5_0003024g0060 Nicotiana tabacum HOM05D007481 ORTHO05D009444 1.5e-104 383.3 260 72.7
Migut.L02012 Erythranthe guttata HOM05D007481 ORTHO05D009444 1.9e-104 382.9 245 75.5
Sabra06G0076900 Salix brachista HOM05D007481 ORTHO05D009444 2.5e-104 382.5 249 74.7
CANSAT35G1044 Cannabis sativa HOM05D007481 ORTHO05D009444 4.3e-104 381.7 248 72.6
Nn2g13707 Nelumbo nucifera HOM05D007481 ORTHO05D009444 7.3e-104 380.9 247 73.7
FAN02G0465 Fragaria x ananassa HOM05D007481 ORTHO05D009444 3.6e-103 378.6 238 75.6
Lalb_Chr07g0193571 Lupinus albus HOM05D007481 ORTHO05D009444 1.8e-102 376.3 242 72.7
Sp6g40760 Schrenkiella parvula HOM05D007481 ORTHO05D009444 1.8e-102 376.3 248 73.4
Glyma.03G058200 Glycine max HOM05D007481 ORTHO05D009444 2.3e-102 375.9 246 73.6
Ciclev10012584m.g Citrus clementina HOM05D007481 ORTHO05D009444 3.1e-102 375.6 245 72.2
ECA248G3524 Erigeron canadensis HOM05D007481 ORTHO05D009444 4.0e-102 375.2 242 74.4
Aa31LG1G23100 Aethionema arabicum HOM05D007481 ORTHO05D009444 5.2e-102 374.8 245 73.1
Medtr4g012440 Medicago truncatula HOM05D007481 ORTHO05D009444 8.9e-102 374.0 251 73.3
CARHR211840 Cardamine hirsuta HOM05D007481 ORTHO05D009444 2.0e-101 372.9 247 72.9
PGR031G3607 Punica granatum HOM05D007481 ORTHO05D009444 2.0e-101 372.9 248 72.6
HanXRQChr01g0007111 Helianthus annuus HOM05D007481 ORTHO05D009444 4.4e-101 371.7 250 72.8
Lj3g0018029 Lotus japonicus HOM05D007481 ORTHO05D009444 5.8e-101 371.3 243 73.7
arahy.Tifrunner.gnm1.ann1.7RHW31 Arachis hypogaea HOM05D007481 ORTHO05D009444 7.5e-101 370.9 245 72.2
Phvul.010G001400 Phaseolus vulgaris HOM05D007481 ORTHO05D009444 1.3e-100 370.2 246 72.0
Sed0020862 Sechium edule HOM05D007481 ORTHO05D009444 1.7e-100 369.8 248 73.0
AL6G10600 Arabidopsis lyrata HOM05D007481 ORTHO05D009444 2.2e-100 369.4 247 72.5
Thhalv10014504m.g Eutrema salsugineum HOM05D007481 ORTHO05D009444 2.2e-100 369.4 248 72.6
Lj3A953G52 Lonicera japonica HOM05D007481 ORTHO05D009444 3.7e-100 368.6 251 71.7
Psat7g244960 Pisum sativum HOM05D007481 ORTHO05D009444 8.3e-100 367.5 246 72.0
THA.LOC104816191 Tarenaya hassleriana HOM05D007481 ORTHO05D009444 1.1e-99 367.1 245 73.1
AT5G01470 Arabidopsis thaliana HOM05D007481 ORTHO05D009444 2.4e-99 365.9 247 71.7
Sc07g0006570 Simmondsia chinensis HOM05D007481 ORTHO05D009444 3.2e-99 365.5 246 72.0
FAN14G0098 Fragaria x ananassa HOM05D007481 ORTHO05D009444 4.1e-99 365.2 307 60.6
Carub.0006s0036 Capsella rubella HOM05D007481 ORTHO05D009444 1.2e-98 363.6 247 72.1
vmacro20262 Vaccinium macrocarpon HOM05D007481 ORTHO05D009444 1.6e-98 363.2 250 72.8
Ca_20231_v3 Cicer arietinum L. HOM05D007481 ORTHO05D009444 2.7e-98 362.5 244 71.3
CsaV3_4G026270 Cucumis sativus L. HOM05D007481 ORTHO05D009444 6.0e-98 361.3 247 71.3
BcaB05g21923 Brassica carinata HOM05D007481 ORTHO05D009444 7.8e-98 360.9 248 71.0
C02p00150 Brassica napus HOM05D007481 ORTHO05D009444 5.1e-97 358.2 243 71.2
Duzib093G0021 Durio zibethinus HOM05D007481 ORTHO05D009444 5.1e-97 358.2 208 78.8
arahy.Tifrunner.gnm1.ann1.6XTR6T Arachis hypogaea HOM05D007481 ORTHO05D009444 6.6e-97 357.8 245 70.2
ClCG04G007010 Citrullus lanatus HOM05D007481 ORTHO05D009444 8.6e-97 357.5 249 71.9
BolC2t06012H Brassica oleracea HOM05D007481 ORTHO05D009444 4.3e-96 355.1 243 70.4
TPR.G13336 Trifolium pratense HOM05D007481 ORTHO05D009444 5.6e-96 354.8 251 69.7
BraA02t04685Z Brassica rapa HOM05D007481 ORTHO05D009444 1.6e-95 353.2 243 70.0
Aqoxy2G00902 Aquilegia oxysepala HOM05D007481 ORTHO05D009444 3.6e-95 352.1 251 66.5
FAN09G2325 Fragaria x ananassa HOM05D007481 ORTHO05D009444 6.2e-95 351.3 247 68.4
BcaC03g13078 Brassica carinata HOM05D007481 ORTHO05D009444 1.1e-94 350.5 243 70.8
Rhsim05G0214800 Rhododendron simsii HOM05D007481 ORTHO05D009444 1.1e-94 350.5 303 59.7
Ah.02g115900 Amaranthus hybridus HOM05D003907 ORTHO05D004819 5.2e-94 348.2 262 63.7
PSO801G0715 Papaver somniferum HOM05D007481 ORTHO05D009444 2.6e-93 345.9 247 67.2
unitig_736.g22787 Utricularia gibba HOM05D007481 ORTHO05D009444 2.6e-93 345.9 235 70.2
PSO339G5056 Papaver somniferum HOM05D007481 ORTHO05D009444 2.1e-90 336.3 247 66.0
ATR0618G339 Amborella trichopoda HOM05D007481 ORTHO05D009444 9.6e-88 327.4 248 64.9
Lsat_1_v5_gn_5_149561 Lactuca sativa HOM05D007481 ORTHO05D009444 2.8e-87 325.9 242 64.9
Gohir.A09G165100 Gossypium hirsutum HOM05D007481 ORTHO05D009444 8.1e-87 324.3 191 79.1
Haze_20985 Corylus avellana HOM05D007481 ORTHO05D009444 7.6e-85 317.8 257 63.8
Hund11009 Selenicereus undatus HOM05D007481 ORTHO05D009444 3.2e-83 312.4 271 59.8
SalBow4G1731 Salvia bowleyana HOM05D007481 ORTHO05D009444 1.1e-80 303.9 201 71.6
FvH4_6g11480 Fragaria vesca HOM05D007481 ORTHO05D009444 1.9e-80 303.1 196 74.5
SEGI_08492 Sequoiadendron giganteum HOM05D007481 ORTHO05D009444 4.3e-80 302.0 286 53.8
TAR633G1799 Trochodendron aralioides HOM05D007481 ORTHO05D009444 1.3e-79 300.4 253 60.5
Zm00001eb063270 Zea mays HOM05D007481 ORTHO05D009444 9.9e-77 290.8 254 56.3
Cpa.g.sc11.154 Carica papaya HOM05D007481 ORTHO05D009444 4.9e-76 288.5 248 60.5
MELO3C003292.2 Cucumis melo HOM05D007481 ORTHO05D009444 6.4e-76 288.1 191 71.7
Os03g0826700 Oryza sativa ssp. japonica HOM05D007481 ORTHO05D009444 7.9e-74 281.2 252 56.7
Pp3c17_21930 Physcomitrium patens HOM05D007481 ORTHO05D009444 1.0e-73 280.8 277 53.1
Mapoly0103s0024 Marchantia polymorpha HOM05D007481 ORTHO05D009444 8.1e-71 271.2 267 53.6
CDE02G3625 Ceratophyllum demersum HOM05D007481 ORTHO05D009444 4.0e-70 268.9 178 72.5
FAN14G2270 Fragaria x ananassa HOM05D000872 ORTHO05D000777 1.7e-68 263.5 290 50.3
AagrBONN_evm.TU.Sc2ySwM_228.1780 Anthoceros agrestis HOM05D007481 ORTHO05D009444 4.2e-67 258.8 213 58.2
SMO119G0350 Selaginella moellendorffii HOM05D007481 ORTHO05D009444 9.3e-67 257.7 212 58.0
CBR_g4113 Chara braunii HOM05D007481 ORTHO05D009444 7.9e-66 254.6 283 46.3
MBI14_g30737_MAGBIO Magnolia biondii HOM05D007481 ORTHO05D009444 1.2e-61 240.7 251 51.0
DCAR_015418 Daucus carota HOM05D007481 ORTHO05D009444 9.6e-56 221.1 134 76.1
VMungo0331G0457 Vigna mungo HOM05D007481 ORTHO05D009444 2.1e-50 203.4 136 71.3
Atru.chr8.2241 Acer truncatum HOM05D007481 ORTHO05D009444 7.4e-48 194.9 116 76.7
HPP92_003771 Vanilla planifolia HOM05D007481 ORTHO05D009444 9.7e-48 194.5 181 54.7
Oeu006297.1 Olea europaea HOM05D007481 ORTHO05D009444 5.2e-33 145.6 85 80.0
EL10Ac5g12562 Beta vulgaris HOM05D007481 ORTHO05D009444 2.9e-28 129.8 93 66.7
Eucgr.B02818 Eucalyptus grandis HOM05D007481 ORTHO05D009444 3.6e-26 122.9 90 62.2
AUR62030437 Chenopodium quinoa HOM05D007481 ORTHO05D009444 3.5e-13 79.7 40 82.5
PSO541G1183 Papaver somniferum HOM05D006745 ORTHO05D008449 4.9e-07 59.3 121 29.8
PSO675G1483 Papaver somniferum HOM05D006745 ORTHO05D008449 4.9e-07 59.3 120 27.5
MCO11G671 Micromonas commoda HOM05D005677 ORTHO05D006966 5.4e-06 55.8 105 35.2
RcHm_v2.0_Chr2g0101571 Rosa chinensis HOM05D005677 ORTHO05D006966 9.2e-06 55.1 197 26.4


User provided reference genes

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