Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv04657 Davidia involucrata HOM05D006020 ORTHO05D007665 2.4e-303 1044.6 518 100.0
Dinv19209 Davidia involucrata HOM05D006020 ORTHO05D007665 1.7e-251 872.5 520 85.2
GSVIVG01028621001 Vitis vinifera HOM05D006020 ORTHO05D007665 3.9e-200 701.8 519 70.5
Lj1C84T12 Lonicera japonica HOM05D006020 ORTHO05D007665 2.1e-190 669.5 481 69.9
Rhsim13G0044300 Rhododendron simsii HOM05D006020 ORTHO05D006855 8.6e-184 647.5 528 64.8
Actinidia37585 Actinidia chinensis HOM05D006020 ORTHO05D007665 4.7e-182 641.7 519 65.9
CiPaw.04G106000 Carya illinoinensis HOM05D006020 ORTHO05D007665 3.2e-178 629.0 521 60.7
Potri.002G241200 Populus trichocarpa HOM05D006020 ORTHO05D007665 2.4e-173 612.8 484 65.3
Sabra02G0183800 Salix brachista HOM05D006020 ORTHO05D007665 3.1e-173 612.5 505 63.4
Manes.12G041000 Manihot esculenta HOM05D006020 ORTHO05D007665 1.3e-171 607.1 519 61.1
vmacro02750 Vaccinium macrocarpon HOM05D006020 ORTHO05D007665 4.9e-171 605.1 557 59.1
Duzib133G0822 Durio zibethinus HOM05D006020 ORTHO05D007665 5.4e-170 601.7 519 60.5
Atru.chr5.2019 Acer truncatum HOM05D006020 ORTHO05D007665 7.1e-170 601.3 521 60.7
Thecc.01G227300 Theobroma cacao HOM05D006020 ORTHO05D007665 5.1e-168 595.1 519 60.7
TAR365G0939 Trochodendron aralioides HOM05D006020 ORTHO05D007665 6.7e-168 594.7 520 59.6
Oeu042519.1 Olea europaea HOM05D006020 ORTHO05D007665 1.3e-166 590.5 523 60.0
MD05G1177200 Malus domestica HOM05D006020 ORTHO05D007665 3.6e-166 589.0 519 61.5
Prupe.8G204200 Prunus persica HOM05D006020 ORTHO05D007665 6.2e-166 588.2 519 61.7
TWI75G0236 Tripterygium wilfordii HOM05D006020 ORTHO05D007665 7.6e-164 581.3 493 62.3
Migut.N02265 Erythranthe guttata HOM05D006020 ORTHO05D007665 6.4e-163 578.2 518 59.1
Ciclev10019729m.g Citrus clementina HOM05D006020 ORTHO05D007665 1.1e-162 577.4 524 59.9
Gorai.007G153400 Gossypium raimondii HOM05D006020 ORTHO05D007665 3.2e-162 575.9 519 58.0
RcHm_v2.0_Chr6g0285011 Rosa chinensis HOM05D006020 ORTHO05D007665 4.2e-162 575.5 520 60.4
QL04p091507 Quercus lobata HOM05D006020 ORTHO05D007665 9.3e-162 574.3 567 56.4
Gohir.D11G143100 Gossypium hirsutum HOM05D006020 ORTHO05D007665 1.6e-161 573.5 528 57.2
Gohir.A11G136800 Gossypium hirsutum HOM05D006020 ORTHO05D007665 7.9e-161 571.2 519 57.4
MSTRG.17550 Avicennia marina HOM05D006020 ORTHO05D007665 1.6e-158 563.5 517 58.8
FvH4_2g19230 Fragaria vesca HOM05D006020 ORTHO05D007665 2.1e-158 563.1 522 59.6
Manes.13G045000 Manihot esculenta HOM05D006020 ORTHO05D007665 1.1e-157 560.8 526 58.7
FAN27G2268 Fragaria x ananassa HOM05D006020 ORTHO05D007665 4.0e-157 558.9 522 59.6
Nn1g07811 Nelumbo nucifera HOM05D006020 ORTHO05D007665 1.5e-156 557.0 527 58.3
Cc01_g17190 Coffea canephora HOM05D006020 ORTHO05D007665 2.0e-156 556.6 521 56.8
FAN24G1617 Fragaria x ananassa HOM05D006020 ORTHO05D007665 5.8e-156 555.1 485 61.6
MBI10_g05712_MAGBIO Magnolia biondii HOM05D006020 ORTHO05D007665 7.1e-154 548.1 486 59.3
COL.COLO4_09005 Corchorus olitorius HOM05D006020 ORTHO05D007665 6.7e-152 541.6 574 53.7
Sc05g0002440 Simmondsia chinensis HOM05D006020 ORTHO05D007665 8.7e-152 541.2 523 53.9
Nitab4.5_0002085g0020 Nicotiana tabacum HOM05D006020 ORTHO05D007665 3.7e-150 535.8 520 55.8
Nitab4.5_0004922g0030 Nicotiana tabacum HOM05D006020 ORTHO05D007665 4.8e-150 535.4 520 55.6
FAN15G0009 Fragaria x ananassa HOM05D006020 ORTHO05D007665 8.2e-150 534.6 575 54.1
Lj1g0020866 Lotus japonicus HOM05D006020 ORTHO05D007665 8.2e-150 534.6 519 55.3
ECA236G4144 Erigeron canadensis HOM05D006020 ORTHO05D007665 9.0e-149 531.2 520 56.5
CANSAT01G2399 Cannabis sativa HOM05D006020 ORTHO05D007665 7.6e-148 528.1 520 55.6
Nitab4.5_0001872g0010 Nicotiana tabacum HOM05D006020 ORTHO05D007665 1.9e-146 523.5 522 55.0
PGR044G0586 Punica granatum HOM05D006020 ORTHO05D007665 2.5e-146 523.1 521 55.5
Nitab4.5_0000045g0010 Nicotiana tabacum HOM05D006020 ORTHO05D007665 4.2e-146 522.3 482 58.1
Glyma.18G171900 Glycine max HOM05D006020 ORTHO05D007665 3.6e-145 519.2 519 54.1
HanXRQChr10g0287321 Helianthus annuus HOM05D006020 ORTHO05D007665 1.0e-144 517.7 458 60.0
Solyc09g061420.3 Solanum lycopersicum HOM05D006020 ORTHO05D007665 3.0e-144 516.2 519 54.3
Lalb_Chr19g0125561 Lupinus albus HOM05D006020 ORTHO05D007665 5.1e-144 515.4 519 53.8
Sed0023867 Sechium edule HOM05D006020 ORTHO05D007665 1.1e-141 507.7 520 53.8
Eucgr.K03608 Eucalyptus grandis HOM05D006020 ORTHO05D007665 6.9e-141 505.0 517 54.0
CAN.G771.64 Capsicum annuum HOM05D006020 ORTHO05D007665 2.0e-140 503.4 520 53.3
Haze_24783 Corylus avellana HOM05D006020 ORTHO05D007665 4.5e-140 502.3 403 64.8
Medtr7g058760 Medicago truncatula HOM05D006020 ORTHO05D007665 4.5e-140 502.3 520 50.8
CsaV3_7G025840 Cucumis sativus L. HOM05D006020 ORTHO05D007665 1.3e-139 500.7 521 53.9
SalBow2G1017 Salvia bowleyana HOM05D006020 ORTHO05D007665 6.5e-139 498.4 522 54.2
THA.LOC104818953 Tarenaya hassleriana HOM05D006020 ORTHO05D007665 1.9e-138 496.9 521 51.4
TPR.G15290 Trifolium pratense HOM05D006020 ORTHO05D007665 1.6e-137 493.8 519 51.1
ATR0736G004 Amborella trichopoda HOM05D006020 ORTHO05D007665 2.7e-137 493.0 485 53.2
MELO3C012759.2 Cucumis melo HOM05D006020 ORTHO05D007665 8.8e-136 488.0 522 53.1
Lsat_1_v5_gn_8_90041 Lactuca sativa HOM05D006066 ORTHO05D007720 1.5e-135 487.3 522 52.9
Phvul.008G124000 Phaseolus vulgaris HOM05D006020 ORTHO05D007665 1.5e-135 487.3 467 55.0
Aqoxy5G00068 Aquilegia oxysepala HOM05D006020 ORTHO05D007665 8.2e-134 481.5 521 52.0
VMungo1383G1607 Vigna mungo HOM05D006020 ORTHO05D007665 1.8e-133 480.3 487 52.8
Thhalv10004024m.g Eutrema salsugineum HOM05D006020 ORTHO05D007665 4.1e-133 479.2 510 51.4
Sp2g19230 Schrenkiella parvula HOM05D006020 ORTHO05D007665 4.1e-133 479.2 512 51.4
Sopen09g024240 Solanum pennellii HOM05D006020 ORTHO05D007665 1.5e-132 477.2 607 46.6
C07p39450 Brassica napus HOM05D006020 ORTHO05D007665 1.0e-131 474.6 511 50.9
BolC7t44464H Brassica oleracea HOM05D006020 ORTHO05D007665 1.3e-131 474.2 511 50.9
Carub.0008s0856 Capsella rubella HOM05D006020 ORTHO05D007665 1.3e-131 474.2 495 51.7
Aa31sc866G30 Aethionema arabicum HOM05D006020 ORTHO05D007665 1.7e-131 473.8 479 52.8
BcaC06g30754 Brassica carinata HOM05D006020 ORTHO05D007665 2.2e-131 473.4 511 50.7
arahy.Tifrunner.gnm1.ann1.PQ4NGV Arachis hypogaea HOM05D006020 ORTHO05D007665 1.4e-130 470.7 483 52.4
PSO674G0123 Papaver somniferum HOM05D006020 ORTHO05D007665 1.9e-130 470.3 520 51.0
AT5G48830 Arabidopsis thaliana HOM05D006020 ORTHO05D007665 1.2e-129 467.6 484 52.1
A06p38870 Brassica napus HOM05D006020 ORTHO05D007665 4.7e-129 465.7 511 49.9
BcaB07g30043 Brassica carinata HOM05D006020 ORTHO05D007665 1.4e-128 464.2 453 54.7
AL8G22000 Arabidopsis lyrata HOM05D006020 ORTHO05D007665 8.8e-128 461.5 494 50.8
EL10Ac7g17782 Beta vulgaris HOM05D006020 ORTHO05D007665 1.5e-127 460.7 522 48.1
AUR62031841 Chenopodium quinoa HOM05D006020 ORTHO05D007665 2.6e-127 459.9 530 47.0
CARHR182910 Cardamine hirsuta HOM05D006020 ORTHO05D007665 4.4e-127 459.1 491 52.1
Hund05517 Selenicereus undatus HOM05D006020 ORTHO05D007665 4.4e-127 459.1 524 47.5
TAR362G0890 Trochodendron aralioides HOM05D006020 ORTHO05D007665 5.7e-127 458.8 353 66.6
BolC2t11751H Brassica oleracea HOM05D006020 ORTHO05D007665 2.2e-126 456.8 446 53.8
BraA06t26802Z Brassica rapa HOM05D006020 ORTHO05D007665 2.8e-126 456.4 497 50.9
ClCG09G009100 Citrullus lanatus HOM05D006020 ORTHO05D007665 1.8e-125 453.8 521 51.1
BcaC03g17676 Brassica carinata HOM05D006020 ORTHO05D007665 1.6e-124 450.7 446 53.6
C02p56820 Brassica napus HOM05D006020 ORTHO05D007665 1.6e-124 450.7 446 53.6
BraA02t08755Z Brassica rapa HOM05D006020 ORTHO05D007665 2.0e-124 450.3 525 49.1
A02p37730 Brassica napus HOM05D006020 ORTHO05D007665 4.5e-124 449.1 450 54.0
AUR62008869 Chenopodium quinoa HOM05D006020 ORTHO05D007665 8.0e-121 438.3 496 47.2
Glyma.08G355500 Glycine max HOM05D006020 ORTHO05D007665 1.6e-116 424.1 466 50.2
PSO170G4604 Papaver somniferum HOM05D006020 ORTHO05D007665 9.8e-111 404.8 482 48.5
CDE06G1596 Ceratophyllum demersum HOM05D006020 ORTHO05D007665 4.2e-106 389.4 379 54.4
Ah.08g213940 Amaranthus hybridus HOM05D006020 ORTHO05D007665 3.4e-103 379.8 378 50.5
MBI19_g27116_MAGBIO Magnolia biondii HOM05D006020 ORTHO05D007665 5.4e-101 372.5 307 63.5
DCAR_018556 Daucus carota HOM05D006066 ORTHO05D007720 2.5e-98 363.6 379 50.9
Zm00001eb241910 Zea mays HOM05D006020 ORTHO05D007665 3.3e-98 363.2 451 45.9
HPP92_017884 Vanilla planifolia HOM05D006020 ORTHO05D007665 4.9e-94 349.4 453 42.6
Actinidia30087 Actinidia chinensis HOM05D006020 ORTHO05D007665 1.6e-92 344.4 209 84.2
Peaxi162Scf00107g00133 Petunia axillaris HOM05D006020 ORTHO05D007665 1.5e-82 311.2 519 39.9
SEGI_37377 Sequoiadendron giganteum HOM05D006020 ORTHO05D007665 2.1e-81 307.4 448 38.2
SGA_v2.0_scaffold42G16144 Striga asiatica HOM05D006020 ORTHO05D007665 9.9e-79 298.5 317 53.3
MBI01_g07173_MAGBIO Magnolia biondii HOM05D006020 ORTHO05D007665 9.2e-69 265.4 285 51.6
Mapoly0173s0025 Marchantia polymorpha HOM05D006020 ORTHO05D007665 2.7e-60 237.3 381 36.5
MBI09_g17752_MAGBIO Magnolia biondii HOM05D006020 ORTHO05D007665 6.0e-60 236.1 307 47.6
arahy.Tifrunner.gnm1.ann1.3CP2KK Arachis hypogaea HOM05D001055 ORTHO05D000867 7.8e-60 235.7 221 60.2
FAN15G1634 Fragaria x ananassa HOM05D006020 ORTHO05D007665 2.9e-54 217.2 273 50.2
HPP92_017879 Vanilla planifolia HOM05D006020 ORTHO05D007665 1.9e-53 214.5 270 44.1
AagrBONN_evm.TU.Sc2ySwM_344.2296 Anthoceros agrestis HOM05D006020 ORTHO05D007665 1.0e-51 208.8 468 34.0
Pp3c24_4300 Physcomitrium patens HOM05D006020 ORTHO05D007665 1.3e-49 201.8 469 31.3
arahy.Tifrunner.gnm1.ann1.PG1H4F Arachis hypogaea HOM05D006020 ORTHO05D007665 8.1e-49 199.1 296 38.9
Psat3g144000 Pisum sativum HOM05D006020 ORTHO05D007665 3.1e-48 197.2 142 67.6
SEGI_14686 Sequoiadendron giganteum HOM05D006020 ORTHO05D007665 2.0e-47 194.5 233 44.2
SMO115G0313 Selaginella moellendorffii HOM05D006020 ORTHO05D007665 2.4e-45 187.6 462 31.0
Psat3g144040 Pisum sativum HOM05D006020 ORTHO05D007665 6.0e-44 183.0 251 41.4
MBI16_g14987_MAGBIO Magnolia biondii HOM05D006020 ORTHO05D007665 4.0e-40 170.2 125 67.2
Cpa.g.sc8.167 Carica papaya HOM05D006020 ORTHO05D007665 6.0e-36 156.4 119 67.2
unitig_85.g27279 Utricularia gibba HOM05D006020 ORTHO05D007665 1.3e-33 148.7 141 53.2
MBI12_g18650_MAGBIO Magnolia biondii HOM05D006020 ORTHO05D007665 8.2e-33 146.0 135 59.3
Cpa.g.sc8.168 Carica papaya HOM05D006020 ORTHO05D007665 1.1e-18 99.0 145 38.6
MBI12_g40856_MAGBIO Magnolia biondii HOM05D006020 ORTHO05D007665 2.0e-18 98.2 91 57.1
MBI16_g14988_MAGBIO Magnolia biondii HOM05D006020 ORTHO05D007665 2.0e-18 98.2 98 52.0
TAR362G0264 Trochodendron aralioides HOM05D006020 ORTHO05D007665 7.4e-18 96.3 109 49.5
CBR_g31943 Chara braunii HOM05D006020 ORTHO05D007665 9.1e-16 89.4 141 38.3
PRCOL_00001532 Prasinoderma coloniale HOM05D006020 ORTHO05D007665 9.4e-13 79.3 193 28.5
Haze_05914 Corylus avellana HOM05D006020 ORTHO05D007665 4.7e-12 77.0 103 37.9
Os02g0515000 Oryza sativa ssp. japonica HOM05D006020 ORTHO05D007665 3.3e-10 70.9 154 29.2
MCO16G349 Micromonas commoda HOM05D006020 ORTHO05D007665 7.7e-07 59.7 67 43.3
BcaB07g30044 Brassica carinata HOM05D006020 ORTHO05D007665 2.9e-06 57.8 61 45.9


User provided reference genes

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