Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv04627 Davidia involucrata HOM05D000566 ORTHO05D008456 2.5e-107 392.1 200 100.0
Hma1.2p1_0437F.1_g152980 Hydrangea macrophylla HOM05D000566 ORTHO05D008456 8.5e-79 297.4 203 77.8
vmacro03936 Vaccinium macrocarpon HOM05D000566 ORTHO05D008456 8.5e-71 270.8 210 70.0
Rhsim13G0191700 Rhododendron simsii HOM05D000566 ORTHO05D000686 1.2e-69 266.9 172 79.1
Atru.chr10.1700 Acer truncatum HOM05D000566 ORTHO05D008456 4.4e-67 258.5 202 69.8
TWI38G1860 Tripterygium wilfordii HOM05D000566 ORTHO05D008456 7.4e-67 257.7 179 73.7
TAR626G0526 Trochodendron aralioides HOM05D000566 ORTHO05D008456 1.3e-66 256.9 198 72.2
Actinidia16807 Actinidia chinensis HOM05D000566 ORTHO05D008456 2.9e-63 245.7 139 85.6
Oeu039926.1 Olea europaea HOM05D000566 ORTHO05D008456 1.5e-62 243.4 140 86.4
Manes.16G037200 Manihot esculenta HOM05D000566 ORTHO05D008456 7.2e-62 241.1 201 66.2
Potri.011G064600 Populus trichocarpa HOM05D000566 ORTHO05D008456 1.2e-61 240.4 199 65.3
Sc05g0007190 Simmondsia chinensis HOM05D000566 ORTHO05D008456 1.2e-61 240.4 170 76.5
CiPaw.09G068300 Carya illinoinensis HOM05D000566 ORTHO05D008456 1.6e-61 240.0 202 67.3
Thecc.06G173200 Theobroma cacao HOM05D000566 ORTHO05D008456 3.6e-61 238.8 153 79.7
MSTRG.7396 Avicennia marina HOM05D000566 ORTHO05D008456 8.0e-61 237.7 142 83.8
Gohir.A06G134006 Gossypium hirsutum HOM05D000566 ORTHO05D008456 8.0e-61 237.7 165 75.2
QL05p046292 Quercus lobata HOM05D000566 ORTHO05D008456 1.4e-60 236.9 209 64.6
THA.LOC104814247 Tarenaya hassleriana HOM05D000566 ORTHO05D008456 1.4e-60 236.9 170 71.8
Lsat_1_v5_gn_4_50020 Lactuca sativa HOM05D000566 ORTHO05D008456 1.8e-60 236.5 179 71.5
Cfa000591 Carpinus fangiana HOM05D000566 ORTHO05D008456 2.3e-60 236.1 202 66.3
ClCG01G023650 Citrullus lanatus HOM05D000566 ORTHO05D008456 2.3e-60 236.1 204 66.7
HanXRQChr07g0186931 Helianthus annuus HOM05D000566 ORTHO05D008456 2.3e-60 236.1 199 64.8
Duzib192G0190 Durio zibethinus HOM05D000566 ORTHO05D008456 3.0e-60 235.7 199 66.3
Lj4g0018718 Lotus japonicus HOM05D000566 ORTHO05D008456 3.0e-60 235.7 171 71.3
RcHm_v2.0_Chr5g0010321 Rosa chinensis HOM05D000566 ORTHO05D008456 3.0e-60 235.7 200 63.0
Hund23960 Selenicereus undatus HOM05D000566 ORTHO05D008456 3.0e-60 235.7 154 80.5
Ciclev10016472m.g Citrus clementina HOM05D000566 ORTHO05D008456 5.2e-60 235.0 145 80.7
Lalb_Chr16g0384251 Lupinus albus HOM05D000566 ORTHO05D008456 5.2e-60 235.0 203 62.6
Migut.M01050 Erythranthe guttata HOM05D000566 ORTHO05D008456 8.8e-60 234.2 145 79.3
MELO3C007220.2 Cucumis melo HOM05D000566 ORTHO05D008456 1.2e-59 233.8 205 67.8
SGA_v2.0_scaffold1G00030 Striga asiatica HOM05D000566 ORTHO05D008456 1.2e-59 233.8 178 68.0
Psat7g118880 Pisum sativum HOM05D000566 ORTHO05D008456 2.6e-59 232.6 201 63.2
unitig_699.g19342 Utricularia gibba HOM05D000566 ORTHO05D008456 2.6e-59 232.6 156 75.6
CANSAT35G0195 Cannabis sativa HOM05D000566 ORTHO05D008456 3.3e-59 232.3 144 80.6
COL.COLO4_31322 Corchorus olitorius HOM05D000566 ORTHO05D000686 3.3e-59 232.3 202 64.9
CAN.G337.143 Capsicum annuum HOM05D000566 ORTHO05D008456 5.7e-59 231.5 127 87.4
FAN25G1525 Fragaria x ananassa HOM05D000566 ORTHO05D000686 5.7e-59 231.5 151 75.5
SalBow8G0706 Salvia bowleyana HOM05D000566 ORTHO05D008456 5.7e-59 231.5 155 75.5
GSVIVG01021190001 Vitis vinifera HOM05D000566 ORTHO05D008456 5.7e-59 231.5 122 92.6
PGSC0003DMG401022314 Solanum tuberosum HOM05D000566 ORTHO05D008456 9.7e-59 230.7 127 88.2
Haze_06259 Corylus avellana HOM05D000566 ORTHO05D008456 1.3e-58 230.3 203 66.0
Prupe.4G059300 Prunus persica HOM05D000566 ORTHO05D008456 1.3e-58 230.3 201 62.7
Sabra11G0046400 Salix brachista HOM05D000566 ORTHO05D008456 1.3e-58 230.3 156 73.1
Ca_26053_v3 Cicer arietinum L. HOM05D000566 ORTHO05D008456 1.7e-58 229.9 139 82.0
FvH4_3g07991 Fragaria vesca HOM05D000566 ORTHO05D008456 1.7e-58 229.9 201 62.7
Peaxi162Scf01479g00012 Petunia axillaris HOM05D000566 ORTHO05D008456 2.2e-58 229.6 127 87.4
Sp1g24970 Schrenkiella parvula HOM05D000566 ORTHO05D008456 2.2e-58 229.6 200 64.0
Gohir.D06G136400 Gossypium hirsutum HOM05D000566 ORTHO05D008456 2.8e-58 229.2 198 64.1
Gorai.010G158600 Gossypium raimondii HOM05D000566 ORTHO05D008456 2.8e-58 229.2 198 64.1
Ah.09g233690 Amaranthus hybridus HOM05D000566 ORTHO05D008456 3.7e-58 228.8 196 63.3
FAN11G2813 Fragaria x ananassa HOM05D000566 ORTHO05D008456 3.7e-58 228.8 200 61.5
CARHR028250 Cardamine hirsuta HOM05D000566 ORTHO05D008456 4.8e-58 228.4 200 63.0
Sed0006380 Sechium edule HOM05D000566 ORTHO05D008456 6.3e-58 228.0 149 77.9
VMungo0251G1655 Vigna mungo HOM05D000566 ORTHO05D008456 6.3e-58 228.0 204 62.7
Glyma.13G171000 Glycine max HOM05D000566 ORTHO05D008456 8.2e-58 227.6 157 75.8
Phvul.003G058300 Phaseolus vulgaris HOM05D000566 ORTHO05D008456 8.2e-58 227.6 176 69.3
Aqoxy1G03201 Aquilegia oxysepala HOM05D000566 ORTHO05D008456 1.1e-57 227.3 123 86.2
DCAR_004017 Daucus carota HOM05D000566 ORTHO05D008456 1.1e-57 227.3 159 74.8
FAN21G0306 Fragaria x ananassa HOM05D000566 ORTHO05D008456 1.1e-57 227.3 202 61.9
PGR042G3563 Punica granatum HOM05D000566 ORTHO05D008456 1.1e-57 227.3 194 64.9
TPR.G16280 Trifolium pratense HOM05D000566 ORTHO05D008456 1.4e-57 226.9 159 74.8
AUR62036584 Chenopodium quinoa HOM05D000566 ORTHO05D008456 3.1e-57 225.7 120 90.0
Lalb_Chr05g0218771 Lupinus albus HOM05D000566 ORTHO05D008456 4.1e-57 225.3 174 67.2
Medtr4g087750 Medicago truncatula HOM05D000566 ORTHO05D008456 4.1e-57 225.3 184 65.2
ECA234G0195 Erigeron canadensis HOM05D000566 ORTHO05D000686 5.3e-57 224.9 143 77.6
PSO675G8854 Papaver somniferum HOM05D000566 ORTHO05D008456 5.3e-57 224.9 206 62.1
Solyc07g064690.1 Solanum lycopersicum HOM05D000566 ORTHO05D008456 5.3e-57 224.9 127 85.8
Eucgr.E02712 Eucalyptus grandis HOM05D000566 ORTHO05D008456 9.1e-57 224.2 155 75.5
AT1G29040 Arabidopsis thaliana HOM05D000566 ORTHO05D008456 1.2e-56 223.8 188 66.0
Carub.0001s2723 Capsella rubella HOM05D000566 ORTHO05D008456 2.0e-56 223.0 128 82.0
Cc02_g14640 Coffea canephora HOM05D000566 ORTHO05D008456 2.0e-56 223.0 122 87.7
Thhalv10009067m.g Eutrema salsugineum HOM05D000566 ORTHO05D008456 2.0e-56 223.0 128 82.8
MD10G1282600 Malus domestica HOM05D000566 ORTHO05D008456 2.0e-56 223.0 202 62.9
A07p11000 Brassica napus HOM05D000566 ORTHO05D008456 2.7e-56 222.6 168 69.6
BraA07t28892Z Brassica rapa HOM05D000566 ORTHO05D008456 2.7e-56 222.6 168 69.6
BcaB03g13911 Brassica carinata HOM05D000566 ORTHO05D008456 1.0e-55 220.7 200 61.0
MBI06_g25985_MAGBIO Magnolia biondii HOM05D000566 ORTHO05D008456 1.0e-55 220.7 144 75.7
Medtr4g087740 Medicago truncatula HOM05D000566 ORTHO05D008456 1.0e-55 220.7 137 79.6
CDE02G2902 Ceratophyllum demersum HOM05D000566 ORTHO05D008456 1.7e-55 219.9 125 84.0
PSO541G3700 Papaver somniferum HOM05D000566 ORTHO05D008456 2.2e-55 219.5 179 65.9
Lj2A297T108 Lonicera japonica HOM05D000566 ORTHO05D008456 5.0e-55 218.4 191 63.9
AL1G42750 Arabidopsis lyrata HOM05D000566 ORTHO05D008456 8.5e-55 217.6 137 76.6
BcaC06g35392 Brassica carinata HOM05D000566 ORTHO05D008456 1.1e-54 217.2 199 58.8
HPP92_024140 Vanilla planifolia HOM05D000566 ORTHO05D008456 1.1e-54 217.2 139 77.0
Nitab4.5_0000206g0050 Nicotiana tabacum HOM05D000566 ORTHO05D008456 1.9e-54 216.5 166 69.9
C07p16640 Brassica napus HOM05D000566 ORTHO05D008456 2.5e-54 216.1 199 57.8
BolC7t42164H Brassica oleracea HOM05D000566 ORTHO05D008456 2.5e-54 216.1 199 58.3
EL10Ac8g20507 Beta vulgaris HOM05D000566 ORTHO05D008456 3.2e-54 215.7 228 55.3
Sopen07g032890 Solanum pennellii HOM05D000566 ORTHO05D008456 3.2e-54 215.7 122 85.2
Os01g0613300 Oryza sativa ssp. japonica HOM05D000566 ORTHO05D008456 1.0e-52 210.7 154 68.8
Zm00001eb162000 Zea mays HOM05D000566 ORTHO05D008456 3.0e-52 209.1 174 61.5
Peaxi162Scf01070g00226 Petunia axillaris HOM05D000566 ORTHO05D008456 3.4e-51 205.7 178 62.4
Glyma.13G170900 Glycine max HOM05D000566 ORTHO05D008456 9.8e-51 204.1 133 75.2
Pp3c24_14610 Physcomitrium patens HOM05D000566 ORTHO05D008456 1.7e-50 203.4 146 67.8
Pp3c23_18520 Physcomitrium patens HOM05D000566 ORTHO05D008456 4.8e-50 201.8 124 75.0
Aa31LG6G11510 Aethionema arabicum HOM05D000566 ORTHO05D008456 1.1e-49 200.7 185 61.6
ATR0602G168 Amborella trichopoda HOM05D000566 ORTHO05D008456 6.5e-47 191.4 196 57.7
VMungo0251G1536 Vigna mungo HOM05D000566 ORTHO05D008456 4.2e-46 188.7 122 73.0
Glyma.04G136400 Glycine max HOM05D000566 ORTHO05D008456 2.8e-45 186.0 122 73.8
AUR62031167 Chenopodium quinoa HOM05D000566 ORTHO05D008456 4.7e-45 185.3 99 89.9
arahy.Tifrunner.gnm1.ann1.AZL87G Arachis hypogaea HOM05D000566 ORTHO05D008456 1.3e-42 177.2 122 68.9
arahy.Tifrunner.gnm1.ann1.441UHN Arachis hypogaea HOM05D000566 ORTHO05D008456 2.8e-42 176.0 122 68.0
SEGI_28108 Sequoiadendron giganteum HOM05D000566 ORTHO05D008456 4.1e-41 172.2 130 63.8
Nn1g04373 Nelumbo nucifera HOM05D000566 ORTHO05D008456 1.5e-38 163.7 125 72.0
Cpa.g.sc7.62 Carica papaya HOM05D000566 ORTHO05D008456 3.6e-37 159.1 111 74.8
AagrBONN_evm.TU.Sc2ySwM_344.3192 Anthoceros agrestis HOM05D000566 ORTHO05D008456 1.4e-36 157.1 106 69.8
CsaV3_6G050800 Cucumis sativus L. HOM05D000566 ORTHO05D008456 1.3e-34 150.6 162 61.7
Nitab4.5_0010317g0010 Nicotiana tabacum HOM05D000566 ORTHO05D008456 1.7e-34 150.2 209 46.9
FAN16G3553 Fragaria x ananassa HOM05D000566 ORTHO05D008456 2.5e-30 136.3 151 53.6
TWI38G1453 Tripterygium wilfordii HOM05D000566 ORTHO05D008456 2.0e-27 126.7 132 55.3
CSS0020746 Camellia sinensis var. sinensis HOM05D000566 ORTHO05D008456 4.4e-27 125.6 129 62.8
CSS0029795 Camellia sinensis var. sinensis HOM05D000566 ORTHO05D008456 4.4e-27 125.6 129 62.8
MCO02G300 Micromonas commoda HOM05D000566 ORTHO05D008456 1.3e-26 124.0 121 54.5
TWI38G2220 Tripterygium wilfordii HOM05D000566 ORTHO05D008456 2.8e-21 106.3 152 48.7
PRCOL_00004523 Prasinoderma coloniale HOM05D000566 ORTHO05D008456 3.6e-21 105.9 126 47.6
Glyma.04G136500 Glycine max HOM05D000566 ORTHO05D008456 2.0e-19 100.1 71 70.4
CSS0045665 Camellia sinensis var. sinensis HOM05D000566 ORTHO05D008456 9.2e-17 91.3 45 93.3
SEGI_18524 Sequoiadendron giganteum HOM05D000566 ORTHO05D008456 5.1e-15 85.5 43 93.0
SEGI_06418 Sequoiadendron giganteum HOM05D000566 ORTHO05D008456 1.1e-14 84.3 55 76.4
Sed0003601 Sechium edule HOM05D000566 ORTHO05D008456 8.1e-13 78.2 114 44.7
Cpa.g.sc7.61 Carica papaya HOM05D000566 ORTHO05D008456 6.8e-12 75.1 37 89.2
SEGI_34869 Sequoiadendron giganteum HOM05D000566 ORTHO05D008456 4.6e-08 62.4 42 66.7
MBI06_g25984_MAGBIO Magnolia biondii HOM05D000566 ORTHO05D008456 1.3e-07 60.8 52 57.7


User provided reference genes

Program Settings