Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv04624 Davidia involucrata HOM05D005954 ORTHO05D007347 6.7e-79 297.4 158 100.0
CSS0014251 Camellia sinensis var. sinensis HOM05D005954 ORTHO05D007347 4.8e-53 211.5 157 77.1
Haze_06257 Corylus avellana HOM05D005954 ORTHO05D007347 2.5e-49 199.1 155 74.8
TAR626G1287 Trochodendron aralioides HOM05D005954 ORTHO05D007347 1.8e-47 193.0 156 74.4
Cpa.g.sc7.59 Carica papaya HOM05D005954 ORTHO05D007347 2.0e-46 189.5 162 73.5
Peaxi162Scf00061g00155 Petunia axillaris HOM05D005954 ORTHO05D007347 9.8e-46 187.2 157 69.4
MELO3C007218.2 Cucumis melo HOM05D005954 ORTHO05D007347 1.3e-45 186.8 158 72.2
Potri.011G064800 Populus trichocarpa HOM05D005954 ORTHO05D007347 2.8e-45 185.7 147 74.1
FAN11G0799 Fragaria x ananassa HOM05D005954 ORTHO05D007347 4.8e-45 184.9 156 72.4
Solyc01g056780.3 Solanum lycopersicum HOM05D005954 ORTHO05D007347 4.8e-45 184.9 157 68.8
ClCG01G023670 Citrullus lanatus HOM05D005954 ORTHO05D007347 8.3e-45 184.1 157 72.6
FAN21G0082 Fragaria x ananassa HOM05D005954 ORTHO05D007347 1.1e-44 183.7 156 72.4
Prupe.4G059500 Prunus persica HOM05D005954 ORTHO05D007347 1.1e-44 183.7 156 69.2
PGSC0003DMG400021493 Solanum tuberosum HOM05D005954 ORTHO05D007347 1.1e-44 183.7 157 68.8
CsaV3_6G050830 Cucumis sativus L. HOM05D005954 ORTHO05D007347 1.4e-44 183.3 158 71.5
FvH4_3g07980 Fragaria vesca HOM05D005954 ORTHO05D007347 2.4e-44 182.6 156 71.8
FAN16G0914 Fragaria x ananassa HOM05D005954 ORTHO05D007347 2.4e-44 182.6 156 71.8
Gohir.D06G136500 Gossypium hirsutum HOM05D005954 ORTHO05D007347 2.4e-44 182.6 139 76.3
Gorai.010G158700 Gossypium raimondii HOM05D005954 ORTHO05D007347 2.4e-44 182.6 139 76.3
Gohir.D05G158700 Gossypium hirsutum HOM05D005954 ORTHO05D007347 2.0e-43 179.5 156 69.2
RcHm_v2.0_Chr5g0010351 Rosa chinensis HOM05D005954 ORTHO05D007347 2.7e-43 179.1 157 69.4
Gorai.009G163700 Gossypium raimondii HOM05D005954 ORTHO05D007347 3.5e-43 178.7 156 69.2
Manes.16G037400 Manihot esculenta HOM05D005954 ORTHO05D007347 4.5e-43 178.3 152 69.1
Thecc.06G173000 Theobroma cacao HOM05D005954 ORTHO05D007347 4.5e-43 178.3 156 67.9
Gohir.A06G134004 Gossypium hirsutum HOM05D005954 ORTHO05D007347 5.9e-43 177.9 136 77.2
Nn1g09054 Nelumbo nucifera HOM05D005954 ORTHO05D007347 1.3e-42 176.8 137 78.1
Atru.chr10.1690 Acer truncatum HOM05D005954 ORTHO05D007347 1.7e-42 176.4 161 68.9
Ciclev10017015m.g Citrus clementina HOM05D005954 ORTHO05D007347 2.2e-42 176.0 164 66.5
Gohir.A05G156000 Gossypium hirsutum HOM05D005954 ORTHO05D007347 2.2e-42 176.0 156 68.6
Manes.17G054200 Manihot esculenta HOM05D005954 ORTHO05D007347 5.0e-42 174.9 148 68.9
QL05p046336 Quercus lobata HOM05D005954 ORTHO05D007347 8.5e-42 174.1 155 67.7
Nitab4.5_0000117g0150 Nicotiana tabacum HOM05D005954 ORTHO05D007347 1.1e-41 173.7 160 71.2
Nitab4.5_0004274g0040 Nicotiana tabacum HOM05D005954 ORTHO05D007347 1.1e-41 173.7 151 73.5
PGR004G0539 Punica granatum HOM05D005954 ORTHO05D007347 1.5e-41 173.3 136 72.1
PGR004G0737 Punica granatum HOM05D005954 ORTHO05D007347 1.5e-41 173.3 136 72.1
Sed0006910 Sechium edule HOM05D005954 ORTHO05D007347 3.2e-41 172.2 158 68.4
MSTRG.14726 Avicennia marina HOM05D005954 ORTHO05D007347 1.6e-40 169.9 158 67.7
Duzib160G0806 Durio zibethinus HOM05D005954 ORTHO05D007347 2.1e-40 169.5 156 67.3
TWI38G2142 Tripterygium wilfordii HOM05D005954 ORTHO05D007347 3.6e-40 168.7 149 70.5
Sopen01g025250 Solanum pennellii HOM05D005954 ORTHO05D007347 1.4e-39 166.8 160 65.6
AUR62036591 Chenopodium quinoa HOM05D005954 ORTHO05D007347 3.0e-39 165.6 139 72.7
Eucgr.D00519 Eucalyptus grandis HOM05D005954 ORTHO05D007347 5.2e-39 164.9 142 70.4
Cfa000593 Carpinus fangiana HOM05D005954 ORTHO05D007347 6.8e-39 164.5 155 64.5
Ah.09g233660 Amaranthus hybridus HOM05D005954 ORTHO05D007347 1.2e-38 163.7 144 70.8
Sabra11G0046600 Salix brachista HOM05D005954 ORTHO05D007347 1.5e-38 163.3 186 58.1
MD10G1282300 Malus domestica HOM05D005954 ORTHO05D007347 2.0e-38 162.9 157 64.3
Rhsim13G0191500 Rhododendron simsii HOM05D005954 ORTHO05D007347 2.0e-38 162.9 159 64.2
GSVIVG01021193001 Vitis vinifera HOM05D005954 ORTHO05D007347 4.4e-38 161.8 109 79.8
Migut.H01450 Erythranthe guttata HOM05D005954 ORTHO05D007347 9.8e-38 160.6 157 63.1
DCAR_007962 Daucus carota HOM05D005954 ORTHO05D007347 1.3e-37 160.2 157 66.9
SalBow8G3893 Salvia bowleyana HOM05D005954 ORTHO05D007347 1.7e-37 159.8 155 63.9
CANSAT11G0094 Cannabis sativa HOM05D005954 ORTHO05D007347 2.2e-37 159.5 160 62.5
Phvul.006G176900 Phaseolus vulgaris HOM05D005954 ORTHO05D007347 2.8e-37 159.1 140 67.9
Phvul.006G176980 Phaseolus vulgaris HOM05D005954 ORTHO05D007347 2.8e-37 159.1 140 67.9
CiPaw.09G068600 Carya illinoinensis HOM05D005954 ORTHO05D007347 6.3e-37 157.9 148 66.2
AUR62031174 Chenopodium quinoa HOM05D005954 ORTHO05D007347 6.3e-37 157.9 138 71.0
vmacro01548 Vaccinium macrocarpon HOM05D005954 ORTHO05D007347 1.1e-36 157.1 162 64.2
Cc02_g14660 Coffea canephora HOM05D005954 ORTHO05D007347 1.4e-36 156.8 161 64.0
Glyma.15G082000 Glycine max HOM05D005954 ORTHO05D007347 4.1e-36 155.2 141 68.8
arahy.Tifrunner.gnm1.ann1.N07IEU Arachis hypogaea HOM05D005954 ORTHO05D007347 9.2e-36 154.1 156 61.5
Thhalv10008967m.g Eutrema salsugineum HOM05D005954 ORTHO05D007347 9.2e-36 154.1 157 64.3
Glyma.13G230600 Glycine max HOM05D005954 ORTHO05D007347 1.2e-35 153.7 141 68.1
PSO541G3988 Papaver somniferum HOM05D005954 ORTHO05D007347 1.6e-35 153.3 136 68.4
C03p75510 Brassica napus HOM05D005954 ORTHO05D007347 1.7e-34 149.8 138 67.4
PSO675G5672 Papaver somniferum HOM05D005954 ORTHO05D007347 3.8e-34 148.7 136 66.2
EL10Ac8g20509 Beta vulgaris HOM05D005954 ORTHO05D007347 8.6e-34 147.5 157 63.1
THA.LOC104820590 Tarenaya hassleriana HOM05D005954 ORTHO05D007347 8.6e-34 147.5 158 60.8
BcaNung06433 Brassica carinata HOM05D005954 ORTHO05D007347 1.1e-33 147.1 137 67.2
CAN.G889.12 Capsicum annuum HOM05D005954 ORTHO05D007347 1.5e-33 146.7 159 59.1
Aqoxy1G03187 Aquilegia oxysepala HOM05D005954 ORTHO05D007347 1.9e-33 146.4 134 67.2
A08p25330 Brassica napus HOM05D005954 ORTHO05D007347 2.5e-33 146.0 138 67.4
BolC3t19807H Brassica oleracea HOM05D005954 ORTHO05D007347 2.5e-33 146.0 138 65.9
BraA08t34485Z Brassica rapa HOM05D005954 ORTHO05D007347 2.5e-33 146.0 138 67.4
A09p37340 Brassica napus HOM05D005954 ORTHO05D007347 3.3e-33 145.6 157 61.8
BraA09t39243Z Brassica rapa HOM05D005954 ORTHO05D007347 3.3e-33 145.6 157 61.8
Lsat_1_v5_gn_7_23061 Lactuca sativa HOM05D005954 ORTHO05D007347 3.3e-33 145.6 164 61.6
Aa31LG5G21180 Aethionema arabicum HOM05D005954 ORTHO05D007347 4.3e-33 145.2 160 60.6
Sp1g25010 Schrenkiella parvula HOM05D005954 ORTHO05D007347 4.3e-33 145.2 157 62.4
C07p16610 Brassica napus HOM05D005954 ORTHO05D007347 7.3e-33 144.4 156 64.1
Medtr2g015790 Medicago truncatula HOM05D005954 ORTHO05D007347 7.3e-33 144.4 126 70.6
BcaB07g32486 Brassica carinata HOM05D005954 ORTHO05D007347 9.5e-33 144.1 157 59.2
arahy.Tifrunner.gnm1.ann1.YBYE48 Arachis hypogaea HOM05D005954 ORTHO05D007347 1.2e-32 143.7 156 61.5
CDE05G1458 Ceratophyllum demersum HOM05D005954 ORTHO05D007347 1.6e-32 143.3 135 68.1
Lj6g0020578 Lotus japonicus HOM05D005954 ORTHO05D007347 2.1e-32 142.9 158 62.0
CARHR028290 Cardamine hirsuta HOM05D005954 ORTHO05D007347 2.8e-32 142.5 145 64.1
BcaNung06755 Brassica carinata HOM05D005954 ORTHO05D007347 3.6e-32 142.1 138 65.2
HanXRQChr04g0116001 Helianthus annuus HOM05D005954 ORTHO05D007347 8.0e-32 141.0 162 63.0
MD16G1032000 Malus domestica HOM05D005954 ORTHO05D007347 8.0e-32 141.0 137 64.2
AL1G42790 Arabidopsis lyrata HOM05D005954 ORTHO05D007347 1.0e-31 140.6 159 60.4
BcaC05g26922 Brassica carinata HOM05D005954 ORTHO05D007347 1.0e-31 140.6 148 63.5
C05p27750 Brassica napus HOM05D005954 ORTHO05D007347 1.0e-31 140.6 148 63.5
BolC5t31496H Brassica oleracea HOM05D005954 ORTHO05D007347 1.0e-31 140.6 148 63.5
Carub.0001s2727 Capsella rubella HOM05D005954 ORTHO05D007347 1.0e-31 140.6 137 65.0
AT1G29070 Arabidopsis thaliana HOM05D005954 ORTHO05D007347 5.2e-31 138.3 159 58.5
Hund23979 Selenicereus undatus HOM05D005954 ORTHO05D007347 5.2e-31 138.3 152 58.6
SGA_v2.0_scaffold1G00032 Striga asiatica HOM05D005954 ORTHO05D007347 6.8e-31 137.9 154 59.7
MD05G1303200 Malus domestica HOM05D005954 ORTHO05D007347 1.2e-30 137.1 158 59.5
arahy.Tifrunner.gnm1.ann1.69550A Arachis hypogaea HOM05D005954 ORTHO05D007347 2.0e-30 136.3 143 60.8
TPR.G11659 Trifolium pratense HOM05D005954 ORTHO05D007347 2.6e-30 136.0 135 63.7
MD10G1067400 Malus domestica HOM05D005954 ORTHO05D007347 4.4e-30 135.2 138 59.4
CDE02G3841 Ceratophyllum demersum HOM05D005954 ORTHO05D009675 1.4e-28 130.2 109 73.4
Psat1g199440 Pisum sativum HOM05D005954 ORTHO05D007347 1.4e-28 130.2 143 62.2
ECA236G0551 Erigeron canadensis HOM05D005954 ORTHO05D007347 1.8e-28 129.8 158 56.3
Oeu001090.1 Olea europaea HOM05D005954 ORTHO05D007347 1.8e-28 129.8 106 69.8
unitig_22.g6753 Utricularia gibba HOM05D005954 ORTHO05D007347 2.0e-27 126.3 161 52.8
MBI13_g00561_MAGBIO Magnolia biondii HOM05D005954 ORTHO05D007347 2.7e-27 125.9 142 62.7
Lj1P1194T69 Lonicera japonica HOM05D005954 ORTHO05D007347 2.3e-26 122.9 84 78.6
Ca_00467_v3 Cicer arietinum L. HOM05D005954 ORTHO05D007347 3.0e-26 122.5 94 74.5
Ca_30955_v3 Cicer arietinum L. HOM05D005954 ORTHO05D007347 3.0e-26 122.5 94 74.5
COL.COLO4_31320 Corchorus olitorius HOM05D005954 ORTHO05D007347 2.5e-25 119.4 79 79.7
Atru.chr10.1684 Acer truncatum HOM05D005954 ORTHO05D007347 5.6e-25 118.2 80 76.2
ATR0602G014 Amborella trichopoda HOM05D005954 ORTHO05D007347 9.5e-25 117.5 116 62.1
BcaC06g35397 Brassica carinata HOM05D005954 ORTHO05D007347 1.5e-22 110.2 136 59.6
Zm00001eb150530 Zea mays HOM05D005954 ORTHO05D007347 7.5e-22 107.8 102 61.8
Sc05g0007180 Simmondsia chinensis HOM05D005954 ORTHO05D007347 2.9e-21 105.9 77 75.3
HPP92_016045 Vanilla planifolia HOM05D005954 ORTHO05D007347 2.9e-21 105.9 88 70.5
MD16G1032400 Malus domestica HOM05D005954 ORTHO05D007347 6.4e-21 104.8 162 48.1
Os01g0805000 Oryza sativa ssp. japonica HOM05D005954 ORTHO05D007347 6.4e-21 104.8 165 48.5
Lalb_Chr20g0121221 Lupinus albus HOM05D005954 ORTHO05D007347 3.2e-20 102.4 66 80.3
Dinv40659 Davidia involucrata HOM05D067992 ORTHO05D037981 3.3e-17 92.4 68 75.0
CARHR028330 Cardamine hirsuta HOM05D005954 ORTHO05D007347 2.0e-14 83.2 57 77.2
MD16G1032600 Malus domestica HOM05D005954 ORTHO05D007347 2.9e-13 79.3 125 48.0
Pp3c21_6450 Physcomitrium patens HOM05D005954 ORTHO05D007347 5.4e-12 75.1 116 50.0
AagrBONN_evm.TU.Sc2ySwM_117.1983 Anthoceros agrestis HOM05D005954 ORTHO05D007347 9.2e-12 74.3 121 50.4
CBR_g29683 Chara braunii HOM05D005954 ORTHO05D007347 2.7e-11 72.8 103 47.6
Pp3c18_19220 Physcomitrium patens HOM05D005954 ORTHO05D007347 3.5e-11 72.4 121 45.5
Mapoly0043s0046 Marchantia polymorpha HOM05D005954 ORTHO05D007347 3.0e-10 69.3 112 51.8
SEGI_22528 Sequoiadendron giganteum HOM05D005954 ORTHO05D007347 6.6e-10 68.2 86 52.3
Nn1g04376 Nelumbo nucifera HOM05D005954 ORTHO05D007347 5.2e-07 58.5 56 64.3
FAN25G0298 Fragaria x ananassa HOM05D000253 ORTHO05D000149 5.8e-06 55.1 72 56.9


User provided reference genes

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