Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv04618 Davidia involucrata HOM05D005057 ORTHO05D006570 9.5e-231 803.1 400 100.0
CiPaw.09G069000 Carya illinoinensis HOM05D005057 ORTHO05D006570 4.2e-162 575.1 457 68.9
Actinidia16804 Actinidia chinensis HOM05D005057 ORTHO05D006570 6.1e-161 571.2 445 69.2
Hma1.2p1_0155F.1_g068170 Hydrangea macrophylla HOM05D005057 ORTHO05D006570 1.4e-160 570.1 443 69.3
Thecc.06G172400 Theobroma cacao HOM05D005057 ORTHO05D006570 5.0e-155 551.6 420 69.5
ClCG03G007800 Citrullus lanatus HOM05D005057 ORTHO05D006570 3.2e-154 548.9 420 69.5
Prupe.4G059900 Prunus persica HOM05D005057 ORTHO05D006570 4.2e-154 548.5 450 65.6
Aqoxy4G00443 Aquilegia oxysepala HOM05D005057 ORTHO05D006570 1.2e-153 547.0 426 67.6
RcHm_v2.0_Chr5g0010551 Rosa chinensis HOM05D005057 ORTHO05D006570 2.7e-153 545.8 415 69.9
Sopen02g021880 Solanum pennellii HOM05D005057 ORTHO05D006570 3.6e-153 545.4 420 67.9
Rhsim13G0191300 Rhododendron simsii HOM05D005057 ORTHO05D006570 6.1e-153 544.7 418 70.1
Ciclev10014965m.g Citrus clementina HOM05D005057 ORTHO05D006570 1.4e-152 543.5 432 67.6
MELO3C002642.2 Cucumis melo HOM05D005057 ORTHO05D006570 1.4e-152 543.5 420 68.8
CANSAT35G0522 Cannabis sativa HOM05D005057 ORTHO05D006570 2.3e-152 542.7 419 68.0
MD10G1281300 Malus domestica HOM05D005057 ORTHO05D006570 2.3e-152 542.7 451 64.7
PSO063G4235 Papaver somniferum HOM05D005057 ORTHO05D006570 3.0e-152 542.3 415 68.7
GSVIVG01021196001 Vitis vinifera HOM05D005057 ORTHO05D006570 1.5e-151 540.0 434 68.0
CsaV3_1G033430 Cucumis sativus L. HOM05D005057 ORTHO05D006570 1.3e-150 537.0 419 68.0
Migut.H01447 Erythranthe guttata HOM05D005057 ORTHO05D006570 2.2e-150 536.2 447 64.4
FvH4_3g07940 Fragaria vesca HOM05D005057 ORTHO05D006570 3.7e-150 535.4 400 70.2
FAN07G2484 Fragaria x ananassa HOM05D005057 ORTHO05D006570 3.7e-150 535.4 419 67.8
Gorai.010G158900 Gossypium raimondii HOM05D005057 ORTHO05D006570 3.7e-150 535.4 452 64.6
Gohir.A06G130800 Gossypium hirsutum HOM05D005057 ORTHO05D006570 2.4e-149 532.7 452 64.2
Manes.16G037800 Manihot esculenta HOM05D005057 ORTHO05D006570 3.1e-149 532.3 432 67.4
Sabra11G0046800 Salix brachista HOM05D005057 ORTHO05D006570 3.5e-148 528.9 451 64.3
CAN.G370.63 Capsicum annuum HOM05D005057 ORTHO05D006570 2.9e-147 525.8 388 70.6
Atru.chr10.1683 Acer truncatum HOM05D005057 ORTHO05D006570 3.8e-147 525.4 480 60.4
TWI38G0714 Tripterygium wilfordii HOM05D005057 ORTHO05D006570 3.8e-147 525.4 427 65.8
PGR004G2757 Punica granatum HOM05D005057 ORTHO05D006570 3.2e-146 522.3 432 65.0
Potri.011G065000 Populus trichocarpa HOM05D005057 ORTHO05D006570 2.7e-145 519.2 436 64.4
SGA_v2.0_scaffold307G48045 Striga asiatica HOM05D005057 ORTHO05D006570 1.0e-144 517.3 472 61.0
HanXRQChr13g0397391 Helianthus annuus HOM05D005057 ORTHO05D006570 3.0e-144 515.8 437 64.1
MBI06_g25988_MAGBIO Magnolia biondii HOM05D005057 ORTHO05D006570 5.2e-144 515.0 433 65.1
Medtr2g015860 Medicago truncatula HOM05D005057 ORTHO05D006570 6.8e-144 514.6 434 65.0
Cc02_g14710 Coffea canephora HOM05D005057 ORTHO05D006570 2.0e-143 513.1 447 62.9
Eucgr.D00512 Eucalyptus grandis HOM05D005057 ORTHO05D006570 2.0e-143 513.1 440 62.3
DCAR_004016 Daucus carota HOM05D005057 ORTHO05D006570 9.8e-143 510.8 423 66.0
Sc12g0008060 Simmondsia chinensis HOM05D005057 ORTHO05D006570 2.8e-142 509.2 404 66.8
ECA236G3111 Erigeron canadensis HOM05D005057 ORTHO05D006570 4.8e-142 508.4 429 65.0
Lalb_Chr15g0089481 Lupinus albus HOM05D005057 ORTHO05D006570 6.3e-142 508.1 437 64.5
SalBow7G0088 Salvia bowleyana HOM05D005057 ORTHO05D006570 6.3e-142 508.1 390 70.8
arahy.Tifrunner.gnm1.ann1.E17GNY Arachis hypogaea HOM05D005057 ORTHO05D006570 1.1e-141 507.3 414 66.9
arahy.Tifrunner.gnm1.ann1.9TM733 Arachis hypogaea HOM05D005057 ORTHO05D006570 3.1e-141 505.8 414 66.7
vmacro03932 Vaccinium macrocarpon HOM05D005057 ORTHO05D006570 9.1e-141 504.2 430 65.3
Glyma.13G230500 Glycine max HOM05D005057 ORTHO05D006570 1.0e-139 500.7 430 63.7
FvH4_4g20380 Fragaria vesca HOM05D005057 ORTHO05D006570 5.0e-139 498.4 381 68.8
Lj6g0017686 Lotus japonicus HOM05D005057 ORTHO05D006570 5.0e-139 498.4 455 61.8
Sp4g16440 Schrenkiella parvula HOM05D005057 ORTHO05D006570 7.2e-138 494.6 418 64.6
Thhalv10016658m.g Eutrema salsugineum HOM05D005057 ORTHO05D006570 1.2e-137 493.8 423 63.6
Oeu041787.3 Olea europaea HOM05D005057 ORTHO05D006570 1.2e-137 493.8 388 68.6
A05p11560 Brassica napus HOM05D005057 ORTHO05D006570 2.1e-137 493.0 417 64.7
BcaB02g10615 Brassica carinata HOM05D005057 ORTHO05D006570 3.6e-137 492.3 408 64.7
Ca_00428_v3 Cicer arietinum L. HOM05D005057 ORTHO05D006570 4.7e-137 491.9 371 71.2
AL4G30000 Arabidopsis lyrata HOM05D005057 ORTHO05D006570 6.1e-137 491.5 416 64.2
Lj2A297G103 Lonicera japonica HOM05D005057 ORTHO05D006570 1.8e-136 490.0 396 68.2
ATR0602G189 Amborella trichopoda HOM05D005057 ORTHO05D006570 4.0e-136 488.8 449 60.8
CDE10G0488 Ceratophyllum demersum HOM05D005057 ORTHO05D006570 8.8e-136 487.6 373 70.2
Aa31LG9G13900 Aethionema arabicum HOM05D005057 ORTHO05D006570 1.5e-135 486.9 423 62.6
BraA05t20104Z Brassica rapa HOM05D005057 ORTHO05D006570 1.5e-135 486.9 439 61.7
C04p15030 Brassica napus HOM05D005057 ORTHO05D006570 5.7e-135 485.0 440 61.1
Aqoxy12s001 Aquilegia oxysepala HOM05D005057 ORTHO05D006570 9.8e-135 484.2 363 71.1
Carub.0004s1572 Capsella rubella HOM05D005057 ORTHO05D006570 1.3e-134 483.8 425 62.8
AT2G34090 Arabidopsis thaliana HOM05D005057 ORTHO05D006570 1.1e-133 480.7 416 63.5
THA.LOC104814250 Tarenaya hassleriana HOM05D005057 ORTHO05D006570 1.1e-133 480.7 475 57.9
BolC4t23078H Brassica oleracea HOM05D005057 ORTHO05D006570 3.1e-133 479.2 439 61.3
VMungo0540G0206 Vigna mungo HOM05D005057 ORTHO05D006570 4.1e-133 478.8 426 62.0
CARHR128190 Cardamine hirsuta HOM05D005057 ORTHO05D006570 9.2e-133 477.6 389 65.8
MSTRG.13217 Avicennia marina HOM05D005057 ORTHO05D006570 4.5e-132 475.3 441 60.3
AUR62031175 Chenopodium quinoa HOM05D005057 ORTHO05D006570 1.0e-131 474.2 357 71.1
EL10Ac8g20510 Beta vulgaris HOM05D005057 ORTHO05D006570 1.3e-131 473.8 465 57.6
Duzib160G0357 Durio zibethinus HOM05D005057 ORTHO05D006570 2.9e-131 472.6 416 61.3
Gohir.D06G136700 Gossypium hirsutum HOM05D005057 ORTHO05D006570 4.7e-129 465.3 404 64.1
Haze_06250 Corylus avellana HOM05D005057 ORTHO05D006570 8.0e-129 464.5 428 62.4
Ah.09g233650 Amaranthus hybridus HOM05D005057 ORTHO05D006570 1.2e-127 460.7 418 62.2
Phvul.006G176700 Phaseolus vulgaris HOM05D005057 ORTHO05D006570 7.3e-122 441.4 432 59.5
AagrBONN_evm.TU.Sc2ySwM_344.2851 Anthoceros agrestis HOM05D005057 ORTHO05D006570 2.3e-120 436.4 403 60.0
FAN11G1223 Fragaria x ananassa HOM05D005057 ORTHO05D006570 8.3e-118 427.9 447 55.9
Mapoly0152s0011 Marchantia polymorpha HOM05D005057 ORTHO05D006570 9.2e-117 424.5 400 58.2
COL.COLO4_31315 Corchorus olitorius HOM05D005057 ORTHO05D006570 5.0e-115 418.7 422 56.4
Pp3c16_13000 Physcomitrium patens HOM05D005057 ORTHO05D006570 1.8e-112 410.2 415 57.1
FAN16G2413 Fragaria x ananassa HOM05D005057 ORTHO05D006570 1.5e-111 407.1 391 59.1
Zm00001eb162010 Zea mays HOM05D005057 ORTHO05D006570 3.4e-111 406.0 306 69.9
Hma1.2p1_0155F.1_g068180 Hydrangea macrophylla HOM05D005057 ORTHO05D006570 2.9e-110 402.9 373 61.4
SMO142G0032 Selaginella moellendorffii HOM05D005057 ORTHO05D006570 2.9e-110 402.9 385 56.6
Sed0014368 Sechium edule HOM05D005057 ORTHO05D006570 3.7e-110 402.5 426 55.6
Hund21184 Selenicereus undatus HOM05D005057 ORTHO05D006570 1.6e-108 397.1 449 54.3
FAN25G1331 Fragaria x ananassa HOM05D005057 ORTHO05D006570 2.1e-105 386.7 421 55.3
Cpa.g.sc7.56 Carica papaya HOM05D005057 ORTHO05D006570 8.1e-105 384.8 363 59.2
Lsat_1_v5_gn_7_23040 Lactuca sativa HOM05D005057 ORTHO05D006570 6.8e-104 381.7 386 58.3
PSO782G3653 Papaver somniferum HOM05D005057 ORTHO05D006570 7.6e-103 378.3 321 65.1
AUR62036592 Chenopodium quinoa HOM05D005057 ORTHO05D006570 2.4e-101 373.2 428 52.1
Psat1g199000 Pisum sativum HOM05D005057 ORTHO05D006570 1.1e-93 347.8 277 68.6
PRCOL_00006187 Prasinoderma coloniale HOM05D005057 ORTHO05D006570 4.6e-92 342.4 342 54.4
MCO11G641 Micromonas commoda HOM05D005057 ORTHO05D006570 7.6e-87 325.1 330 54.5
Cre01.g033700 Chlamydomonas reinhardtii HOM05D005057 ORTHO05D006570 2.6e-79 300.1 405 44.9
Nn1g09052 Nelumbo nucifera HOM05D005057 ORTHO05D006570 5.1e-75 285.8 293 56.3
Solyc02g076950.2 Solanum lycopersicum HOM05D005057 ORTHO05D006570 1.9e-74 283.9 177 81.9
Peaxi162Scf00261g01011 Petunia axillaris HOM05D005057 ORTHO05D006570 3.1e-72 276.6 203 67.0
QL05p046461 Quercus lobata HOM05D005057 ORTHO05D006570 2.0e-71 273.9 170 83.5
TPR.G11697 Trifolium pratense HOM05D005057 ORTHO05D006570 1.9e-69 267.3 280 54.6
Nn1g09100 Nelumbo nucifera HOM05D005057 ORTHO05D006570 4.6e-68 262.7 151 86.8
MD05G1302500 Malus domestica HOM05D005057 ORTHO05D006570 5.1e-67 259.2 327 48.9
Nitab4.5_0003322g0070 Nicotiana tabacum HOM05D005057 ORTHO05D006570 5.1e-67 259.2 172 80.2
Nitab4.5_0000681g0230 Nicotiana tabacum HOM05D005057 ORTHO05D006570 8.7e-67 258.5 172 80.2
TAR626G1061 Trochodendron aralioides HOM05D005057 ORTHO05D006570 1.6e-65 254.2 184 71.7
TPR.G30010 Trifolium pratense HOM05D005057 ORTHO05D006570 1.0e-62 245.0 154 79.9
Nitab4.5_0000681g0220 Nicotiana tabacum HOM05D005057 ORTHO05D006570 1.3e-62 244.6 186 65.6
Nitab4.5_0003322g0060 Nicotiana tabacum HOM05D005057 ORTHO05D006570 6.5e-62 242.3 185 65.9
Os01g0613900 Oryza sativa ssp. japonica HOM05D005057 ORTHO05D006570 1.1e-61 241.5 137 86.1
Ca_30957_v3 Cicer arietinum L. HOM05D005057 ORTHO05D006570 7.4e-58 228.8 145 80.0
Lalb_Chr18g0059151 Lupinus albus HOM05D005057 ORTHO05D006570 7.4e-58 228.8 220 60.9
Lalb_Chr18g0059161 Lupinus albus HOM05D005057 ORTHO05D006570 2.9e-54 216.9 194 60.8
QL05p046449 Quercus lobata HOM05D005057 ORTHO05D006570 1.3e-49 201.4 160 66.2
TAR626G0988 Trochodendron aralioides HOM05D005057 ORTHO05D006570 3.6e-44 183.3 119 81.5
HPP92_020166 Vanilla planifolia HOM05D005057 ORTHO05D006570 1.4e-43 181.4 122 77.9
BcaC04g22954 Brassica carinata HOM05D005057 ORTHO05D006570 3.0e-43 180.3 234 50.9
C09p55570 Brassica napus HOM05D005057 ORTHO05D006570 3.0e-43 180.3 234 50.9
BolC9t54241H Brassica oleracea HOM05D005057 ORTHO05D006570 3.0e-43 180.3 234 50.9
unitig_22.g6755 Utricularia gibba HOM05D005057 ORTHO05D006570 5.2e-43 179.5 169 59.8
HPP92_020184 Vanilla planifolia HOM05D005057 ORTHO05D006570 1.3e-38 164.9 162 54.3
BcaC01g06160 Brassica carinata HOM05D005057 ORTHO05D006570 3.6e-36 156.8 182 56.6
unitig_22.g6756 Utricularia gibba HOM05D005057 ORTHO05D006570 3.0e-35 153.7 120 70.8
Psat1g199040 Pisum sativum HOM05D005057 ORTHO05D006570 4.1e-32 143.3 138 58.0
CSS0031450 Camellia sinensis var. sinensis HOM05D005057 ORTHO05D006570 1.2e-31 141.7 126 60.3
COL.COLO4_25087 Corchorus olitorius HOM05D005057 ORTHO05D006570 3.2e-29 133.7 74 82.4
BolC4t26729H Brassica oleracea HOM05D005057 ORTHO05D006570 4.2e-29 133.3 96 72.9
BolC7t41970H Brassica oleracea HOM05D005057 ORTHO05D006570 1.6e-28 131.3 94 73.4
Glyma.14G170500 Glycine max HOM05D005057 ORTHO05D006570 2.2e-25 120.9 121 57.9
RcHm_v2.0_Chr5g0010591 Rosa chinensis HOM05D005057 ORTHO05D006570 5.4e-24 116.3 78 73.1
MD16G1033100 Malus domestica HOM05D005057 ORTHO05D006570 2.1e-20 104.4 91 63.7
unitig_22.g6754 Utricularia gibba HOM05D005057 ORTHO05D006570 2.8e-20 104.0 144 43.1
HPP92_020183 Vanilla planifolia HOM05D005057 ORTHO05D006570 5.7e-18 96.3 74 62.2
Medtr2g015780 Medicago truncatula HOM05D005057 ORTHO05D006570 3.5e-15 87.0 63 68.3
SEGI_02925 Sequoiadendron giganteum HOM05D005057 ORTHO05D006570 6.6e-14 82.8 130 42.3
RcHm_v2.0_Chr5g0010491 Rosa chinensis HOM05D005057 ORTHO05D006570 1.1e-13 82.0 120 45.0
BcaC01g03610 Brassica carinata HOM05D005057 ORTHO05D019871 6.1e-12 76.3 73 53.4
PSO063G0949 Papaver somniferum HOM05D005057 ORTHO05D006570 3.7e-09 67.0 58 55.2
arahy.Tifrunner.gnm1.ann1.XF9LE9 Arachis hypogaea HOM05D005057 ORTHO05D011377 1.1e-08 65.5 160 35.6


User provided reference genes

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