Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv04571 Davidia involucrata HOM05D002728 ORTHO05D002874 1.5e-32 142.1 67 100.0
Dinv41242 Davidia involucrata HOM05D002728 ORTHO05D002874 1.4e-22 109.0 52 98.1
Dinv42718 Davidia involucrata HOM05D002728 ORTHO05D002874 6.7e-20 100.1 51 90.2
Dinv43383 Davidia involucrata HOM05D002728 ORTHO05D002874 6.7e-20 100.1 51 90.2
Hma1.2p1_0155F.1_g068590 Hydrangea macrophylla HOM05D002728 ORTHO05D002874 5.8e-16 87.0 54 72.2
Hma1.2p1_1025F.1_g249360 Hydrangea macrophylla HOM05D002728 ORTHO05D002874 1.9e-14 82.0 60 70.0
Oeu028651.1 Olea europaea HOM05D002728 ORTHO05D002874 2.3e-12 75.1 52 61.5
Actinidia38632 Actinidia chinensis HOM05D002728 ORTHO05D002874 2.5e-11 71.6 52 65.4
Actinidia17316 Actinidia chinensis HOM05D002728 ORTHO05D002874 1.3e-10 69.3 52 65.4
GSVIVG01029218001 Vitis vinifera HOM05D002728 ORTHO05D002874 3.7e-10 67.8 61 50.8
CSS0050130 Camellia sinensis var. sinensis HOM05D002728 ORTHO05D002874 1.1e-09 66.2 61 49.2
SGA_v2.0_scaffold13G06659 Striga asiatica HOM05D002728 ORTHO05D002874 3.1e-09 64.7 53 54.7
vmacro06011 Vaccinium macrocarpon HOM05D002728 ORTHO05D002874 4.0e-09 64.3 52 67.3
TAR383G0981 Trochodendron aralioides HOM05D002728 ORTHO05D002874 2.6e-08 61.6 55 60.0
CiPaw.07G192700 Carya illinoinensis HOM05D002728 ORTHO05D002874 4.5e-08 60.8 52 55.8
MSTRG.19298 Avicennia marina HOM05D002728 ORTHO05D002874 5.8e-08 60.5 63 41.3
Cc06_g06720 Coffea canephora HOM05D002728 ORTHO05D002874 5.8e-08 60.5 58 44.8
TAR626G0658 Trochodendron aralioides HOM05D002728 ORTHO05D002874 7.6e-08 60.1 52 55.8
Gohir.A05G065400 Gossypium hirsutum HOM05D002728 ORTHO05D002874 1.0e-07 59.7 59 50.8
Migut.J00687 Erythranthe guttata HOM05D002728 ORTHO05D002874 1.3e-07 59.3 58 44.8
Lsat_1_v5_gn_8_67780 Lactuca sativa HOM05D002728 ORTHO05D002874 1.3e-07 59.3 60 48.3
Nn8g38588 Nelumbo nucifera HOM05D002728 ORTHO05D002874 2.9e-07 58.2 57 59.6
Rhsim03G0264700 Rhododendron simsii HOM05D002728 ORTHO05D002874 4.9e-07 57.4 52 57.7
vmacro14225 Vaccinium macrocarpon HOM05D002728 ORTHO05D002874 6.5e-07 57.0 55 54.5
Cc02_g31460 Coffea canephora HOM05D002728 ORTHO05D002874 8.4e-07 56.6 58 41.4
Rhsim07G0137300 Rhododendron simsii HOM05D002728 ORTHO05D002874 8.4e-07 56.6 52 51.9
Sopen10g032350 Solanum pennellii HOM05D002728 ORTHO05D002874 8.4e-07 56.6 61 41.0
MD15G1109200 Malus domestica HOM05D002728 ORTHO05D002874 1.1e-06 56.2 55 54.5
MD08G1131600 Malus domestica HOM05D002728 ORTHO05D002874 1.4e-06 55.8 59 49.2
Prupe.1G461400 Prunus persica HOM05D002728 ORTHO05D002874 1.4e-06 55.8 55 50.9
Cc06_g13200 Coffea canephora HOM05D002728 ORTHO05D002874 1.9e-06 55.5 46 54.3
Dinv09620 Davidia involucrata HOM05D002728 ORTHO05D002874 1.9e-06 55.5 57 49.1
Cc11_g04580 Coffea canephora HOM05D002728 ORTHO05D002874 3.2e-06 54.7 61 36.1
Lsat_1_v5_gn_4_112200 Lactuca sativa HOM05D002728 ORTHO05D002874 4.2e-06 54.3 55 49.1
Oeu009852.1 Olea europaea HOM05D002728 ORTHO05D002874 4.2e-06 54.3 51 52.9
PGSC0003DMG400028143 Solanum tuberosum HOM05D002728 ORTHO05D002874 4.2e-06 54.3 52 46.2
Gorai.009G068800 Gossypium raimondii HOM05D002728 ORTHO05D002874 5.5e-06 53.9 55 49.1
Nitab4.5_0005257g0030 Nicotiana tabacum HOM05D002728 ORTHO05D002874 5.5e-06 53.9 52 46.2
Solyc10g081830.3 Solanum lycopersicum HOM05D002728 ORTHO05D002874 7.1e-06 53.5 52 44.2


User provided reference genes

Program Settings