Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv04437 Davidia involucrata HOM05D007261 ORTHO05D009163 3.1e-148 528.5 273 100.0
Hma1.2p1_0738F.1_g210990 Hydrangea macrophylla HOM05D007261 ORTHO05D009163 4.8e-109 398.3 250 82.0
Manes.09G172600 Manihot esculenta HOM05D007261 ORTHO05D009163 8.2e-109 397.5 256 78.9
GSVIVG01001121001 Vitis vinifera HOM05D007261 ORTHO05D009163 7.0e-108 394.4 257 80.5
Cfa009475 Carpinus fangiana HOM05D007261 ORTHO05D009163 9.1e-108 394.0 263 77.2
Nn4g22065 Nelumbo nucifera HOM05D007261 ORTHO05D009163 4.5e-107 391.7 267 76.8
Rhsim12G0015700 Rhododendron simsii HOM05D007261 ORTHO05D009163 3.8e-106 388.7 260 78.5
Cpa.g.sc38.54 Carica papaya HOM05D007261 ORTHO05D009163 5.0e-106 388.3 265 74.0
CSS0010700 Camellia sinensis var. sinensis HOM05D007261 ORTHO05D009163 1.4e-105 386.7 255 79.2
vmacro01006 Vaccinium macrocarpon HOM05D007261 ORTHO05D009163 1.9e-105 386.3 259 78.8
QL03p048277 Quercus lobata HOM05D007261 ORTHO05D009163 4.2e-105 385.2 255 76.5
CSS0041929 Camellia sinensis var. sinensis HOM05D007261 ORTHO05D009163 7.2e-105 384.4 255 78.8
Duzib264G0686 Durio zibethinus HOM05D007261 ORTHO05D009163 4.7e-104 381.7 271 73.8
Potri.001G070800 Populus trichocarpa HOM05D007261 ORTHO05D009163 1.0e-103 380.6 264 73.1
Sabra01G0049700 Salix brachista HOM05D007261 ORTHO05D009163 1.8e-103 379.8 261 73.6
Thecc.01G239300 Theobroma cacao HOM05D007261 ORTHO05D009163 1.1e-102 377.1 273 72.9
TAR629G2200 Trochodendron aralioides HOM05D007261 ORTHO05D009163 2.6e-102 375.9 260 75.8
Prupe.1G211100 Prunus persica HOM05D007261 ORTHO05D009163 7.4e-102 374.4 248 75.8
Cc11_g14850 Coffea canephora HOM05D007261 ORTHO05D009163 1.3e-101 373.6 271 73.1
RcHm_v2.0_Chr4g0428371 Rosa chinensis HOM05D007261 ORTHO05D009163 8.2e-101 370.9 241 76.3
Eucgr.J01661 Eucalyptus grandis HOM05D007261 ORTHO05D009163 1.4e-100 370.2 261 73.9
Ciclev10029098m.g Citrus clementina HOM05D007261 ORTHO05D009163 1.8e-100 369.8 267 72.7
MD16G1145000 Malus domestica HOM05D007261 ORTHO05D009163 7.0e-100 367.9 236 77.1
FvH4_4g22120 Fragaria vesca HOM05D007261 ORTHO05D009163 2.0e-99 366.3 233 77.3
MD13G1134400 Malus domestica HOM05D007261 ORTHO05D009163 7.7e-99 364.4 236 76.3
Atru.chr12.1480 Acer truncatum HOM05D007261 ORTHO05D009163 1.0e-98 364.0 236 76.7
FAN17G2458 Fragaria x ananassa HOM05D007261 ORTHO05D009163 1.0e-98 364.0 248 73.8
CsaV3_3G043490 Cucumis sativus L. HOM05D007261 ORTHO05D009163 1.3e-98 363.6 261 72.0
FAN12G3746 Fragaria x ananassa HOM05D007261 ORTHO05D009163 1.7e-98 363.2 233 76.8
Sed0025955 Sechium edule HOM05D007261 ORTHO05D009163 6.5e-98 361.3 261 72.4
FAN07G0598 Fragaria x ananassa HOM05D007261 ORTHO05D009163 1.1e-97 360.5 241 75.5
Nitab4.5_0005286g0010 Nicotiana tabacum HOM05D007261 ORTHO05D009163 1.5e-97 360.1 261 72.8
MELO3C026753.2 Cucumis melo HOM05D007261 ORTHO05D009163 2.5e-97 359.4 257 72.4
PGR119G1620 Punica granatum HOM05D007261 ORTHO05D009163 7.2e-97 357.8 249 73.9
arahy.Tifrunner.gnm1.ann1.EWZS38 Arachis hypogaea HOM05D007261 ORTHO05D009163 8.0e-96 354.4 238 73.5
arahy.Tifrunner.gnm1.ann1.X3R9N8 Arachis hypogaea HOM05D007261 ORTHO05D009163 8.0e-96 354.4 238 73.5
CAN.G624.13 Capsicum annuum HOM05D007261 ORTHO05D009163 2.3e-95 352.8 264 71.6
Hund12712 Selenicereus undatus HOM05D007261 ORTHO05D009163 3.0e-95 352.4 256 72.7
Oeu021934.1 Olea europaea HOM05D007261 ORTHO05D009163 4.0e-95 352.1 257 71.2
Aqoxy5G04229 Aquilegia oxysepala HOM05D007261 ORTHO05D009163 1.2e-94 350.5 255 69.8
Peaxi162Scf01167g00120 Petunia axillaris HOM05D007261 ORTHO05D009163 1.2e-94 350.5 260 71.9
ClCG10G013090 Citrullus lanatus HOM05D007261 ORTHO05D009163 3.3e-94 349.0 262 71.4
AUR62017794 Chenopodium quinoa HOM05D007261 ORTHO05D009163 7.5e-94 347.8 262 68.7
AUR62003485 Chenopodium quinoa HOM05D007261 ORTHO05D009163 9.7e-94 347.4 262 68.7
TWI18G1332 Tripterygium wilfordii HOM05D007261 ORTHO05D009163 1.3e-93 347.1 269 69.1
Gorai.007G068700 Gossypium raimondii HOM05D007261 ORTHO05D009163 2.2e-93 346.3 237 75.9
PGSC0003DMG400002189 Solanum tuberosum HOM05D007261 ORTHO05D009163 4.8e-93 345.1 236 75.8
Gohir.A11G059400 Gossypium hirsutum HOM05D007261 ORTHO05D009163 6.3e-93 344.7 237 75.5
Solyc11g040130.2 Solanum lycopersicum HOM05D007261 ORTHO05D009163 8.3e-93 344.4 265 70.2
Sopen11g017340 Solanum pennellii HOM05D007261 ORTHO05D009163 1.1e-92 344.0 265 70.2
SalBow2G2703 Salvia bowleyana HOM05D007261 ORTHO05D009163 1.8e-92 343.2 282 67.7
Lj1g0023925 Lotus japonicus HOM05D007261 ORTHO05D009163 2.4e-92 342.8 237 71.7
Gohir.D11G063500 Gossypium hirsutum HOM05D007261 ORTHO05D009163 4.1e-92 342.0 237 75.1
PSO017G6922 Papaver somniferum HOM05D007261 ORTHO05D009163 7.0e-92 341.3 228 75.9
EL10Ac6g15388 Beta vulgaris HOM05D007261 ORTHO05D009163 4.5e-91 338.6 250 69.2
PSO478G2703 Papaver somniferum HOM05D007261 ORTHO05D009163 7.7e-91 337.8 228 75.4
Haze_12532 Corylus avellana HOM05D007261 ORTHO05D009163 1.7e-90 336.7 405 49.4
TWI36G0866 Tripterygium wilfordii HOM05D007261 ORTHO05D009163 1.7e-90 336.7 262 69.1
Lalb_Chr04g0257321 Lupinus albus HOM05D007261 ORTHO05D009163 2.2e-90 336.3 231 73.6
AL1G52610 Arabidopsis lyrata HOM05D007261 ORTHO05D009163 8.5e-90 334.3 257 65.4
AT1G44960 Arabidopsis thaliana HOM05D007261 ORTHO05D009163 1.1e-89 334.0 263 65.4
Lj3A1078G18 Lonicera japonica HOM05D007261 ORTHO05D009163 1.5e-89 333.6 225 75.1
Carub.0001s3543 Capsella rubella HOM05D007261 ORTHO05D009163 7.2e-89 331.3 256 66.4
CANSAT01G0240 Cannabis sativa HOM05D007261 ORTHO05D009163 9.4e-89 330.9 233 70.4
Phvul.008G004000 Phaseolus vulgaris HOM05D007261 ORTHO05D009163 1.2e-88 330.5 242 69.4
CARHR036160 Cardamine hirsuta HOM05D007261 ORTHO05D009163 2.7e-88 329.3 265 61.9
Ah.03g147240 Amaranthus hybridus HOM05D007261 ORTHO05D009163 8.0e-88 327.8 259 65.3
HanXRQChr06g0175371 Helianthus annuus HOM05D007261 ORTHO05D009163 4.0e-87 325.5 238 70.6
Aa31LG7G10040 Aethionema arabicum HOM05D007261 ORTHO05D009163 8.8e-87 324.3 236 66.9
Lsat_1_v5_gn_3_33201 Lactuca sativa HOM05D007261 ORTHO05D009163 1.2e-86 323.9 238 70.6
Glyma.18G298600 Glycine max HOM05D007261 ORTHO05D009163 2.0e-86 323.2 231 71.9
Ca_04086_v3 Cicer arietinum L. HOM05D007261 ORTHO05D009163 2.6e-86 322.8 253 64.8
Glyma.08G363400 Glycine max HOM05D007261 ORTHO05D009163 2.6e-86 322.8 237 70.0
TPR.G9720 Trifolium pratense HOM05D007261 ORTHO05D009163 3.4e-86 322.4 225 71.1
CDE05G0176 Ceratophyllum demersum HOM05D007261 ORTHO05D009163 9.8e-86 320.9 233 69.1
Psat3g206640 Pisum sativum HOM05D007261 ORTHO05D009163 9.8e-86 320.9 245 66.9
Thhalv10011722m.g Eutrema salsugineum HOM05D007261 ORTHO05D009163 6.3e-85 318.2 257 63.0
Medtr7g006790 Medicago truncatula HOM05D007261 ORTHO05D009163 1.1e-84 317.4 252 64.3
Medtr7g006800 Medicago truncatula HOM05D007261 ORTHO05D009163 1.1e-84 317.4 252 64.3
BcaB07g33898 Brassica carinata HOM05D007261 ORTHO05D009163 1.4e-84 317.0 251 63.3
Migut.K01136 Erythranthe guttata HOM05D007261 ORTHO05D009163 1.4e-84 317.0 237 70.5
BolC6t35245H Brassica oleracea HOM05D007261 ORTHO05D009163 1.8e-84 316.6 248 64.1
C06p01120 Brassica napus HOM05D007261 ORTHO05D009163 5.4e-84 315.1 246 63.4
Sp1g33800 Schrenkiella parvula HOM05D007261 ORTHO05D009163 5.4e-84 315.1 258 61.6
HPP92_020118 Vanilla planifolia HOM05D007261 ORTHO05D009163 5.4e-84 315.1 224 72.8
ECA246G1741 Erigeron canadensis HOM05D007261 ORTHO05D009163 9.1e-84 314.3 228 68.0
BraA10t42964Z Brassica rapa HOM05D007261 ORTHO05D009163 1.6e-83 313.5 251 62.9
A10p07140 Brassica napus HOM05D007261 ORTHO05D009163 2.0e-83 313.2 251 62.9
Sc17g0001500 Simmondsia chinensis HOM05D007261 ORTHO05D009163 3.8e-82 308.9 198 76.3
THA.LOC104801410 Tarenaya hassleriana HOM05D007261 ORTHO05D009163 6.6e-82 308.1 249 61.8
ATR0582G128 Amborella trichopoda HOM05D007261 ORTHO05D009163 1.5e-81 307.0 237 64.6
CiPaw.05G097700 Carya illinoinensis HOM05D007261 ORTHO05D009163 3.3e-81 305.8 264 63.6
unitig_26.g10437 Utricularia gibba HOM05D000361 ORTHO05D007482 3.0e-79 299.3 229 65.9
Os11g0537300 Oryza sativa ssp. japonica HOM05D007261 ORTHO05D009163 3.4e-78 295.8 238 62.6
VMungo1383G1401 Vigna mungo HOM05D007261 ORTHO05D009163 5.7e-78 295.0 215 69.8
Zm00001eb197910 Zea mays HOM05D007261 ORTHO05D009163 4.9e-77 292.0 237 61.6
SEGI_21849 Sequoiadendron giganteum HOM05D007261 ORTHO05D009163 1.1e-65 254.2 198 63.6
AagrBONN_evm.TU.Sc2ySwM_228.5286 Anthoceros agrestis HOM05D007261 ORTHO05D009163 2.2e-61 240.0 234 53.0
SMO351G0136 Selaginella moellendorffii HOM05D007261 ORTHO05D009163 5.1e-58 228.8 202 57.4
Pp3c19_21680 Physcomitrium patens HOM05D007261 ORTHO05D009163 1.5e-57 227.3 224 51.3
Mapoly0073s0041 Marchantia polymorpha HOM05D007261 ORTHO05D009163 1.6e-56 223.8 222 50.5
HPP92_020128 Vanilla planifolia HOM05D007261 ORTHO05D009163 8.1e-56 221.5 211 60.7
Nitab4.5_0002113g0010 Nicotiana tabacum HOM05D000361 ORTHO05D007482 3.4e-54 216.1 161 72.7
CBR_g44525 Chara braunii HOM05D007261 ORTHO05D009163 1.7e-45 187.2 255 43.9
BcaC08g42890 Brassica carinata HOM05D007261 ORTHO05D009163 3.8e-45 186.0 133 65.4
Actinidia30573 Actinidia chinensis HOM05D007261 ORTHO05D009163 1.7e-37 160.6 101 76.2
Potri.003G159901 Populus trichocarpa HOM05D007261 ORTHO05D009163 1.7e-37 160.6 98 79.6
CDE05G1764 Ceratophyllum demersum HOM05D007261 ORTHO05D009163 2.9e-37 159.8 121 64.5
Hma1.2p1_0738F.1_g211000 Hydrangea macrophylla HOM05D007261 ORTHO05D009163 1.3e-32 144.4 97 78.4
PRCOL_00004129 Prasinoderma coloniale HOM05D007261 ORTHO05D009163 2.3e-18 97.1 266 32.0
PRCOL_00001953 Prasinoderma coloniale HOM05D005243 ORTHO05D006670 8.7e-10 68.6 201 30.3
Cre06.g262000 Chlamydomonas reinhardtii HOM05D001530 ORTHO05D003676 1.1e-07 61.6 191 27.2
arahy.Tifrunner.gnm1.ann1.AUQ61E Arachis hypogaea HOM05D001530 ORTHO05D003676 1.8e-07 60.8 243 26.7
Lalb_Chr13g0304101 Lupinus albus HOM05D001530 ORTHO05D003676 1.2e-06 58.2 201 25.4
Gohir.D02G037800 Gossypium hirsutum HOM05D001530 ORTHO05D003676 2.0e-06 57.4 214 27.1
Gorai.005G041700 Gossypium raimondii HOM05D001530 ORTHO05D003676 2.0e-06 57.4 214 27.1
Cre01.g043050 Chlamydomonas reinhardtii HOM05D005243 ORTHO05D006670 3.4e-06 56.6 154 28.6
Gohir.A02G030900 Gossypium hirsutum HOM05D001530 ORTHO05D003676 3.4e-06 56.6 214 27.1
Mapoly0066s0111 Marchantia polymorpha HOM05D005243 ORTHO05D006670 3.4e-06 56.6 213 28.6
Duzib138G1359 Durio zibethinus HOM05D001530 ORTHO05D003676 4.5e-06 56.2 205 25.4
TWI53G1969 Tripterygium wilfordii HOM05D001530 ORTHO05D003676 5.9e-06 55.8 201 26.9


User provided reference genes

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