Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv04319 Davidia involucrata HOM05D000189 ORTHO05D023418 1.5e-80 302.8 147 100.0
Actinidia05213 Actinidia chinensis HOM05D000189 ORTHO05D007610 3.2e-51 205.3 118 85.6
CSS0028714 Camellia sinensis var. sinensis HOM05D000189 ORTHO05D007610 9.4e-51 203.8 118 85.6
CANSAT56G1962 Cannabis sativa HOM05D000189 ORTHO05D007610 3.4e-45 185.3 120 79.2
GSVIVG01014381001 Vitis vinifera HOM05D000189 ORTHO05D007610 3.4e-45 185.3 118 78.8
Lj8C158T4 Lonicera japonica HOM05D000189 ORTHO05D007610 4.5e-45 184.9 118 75.4
Atru.chr2.2730 Acer truncatum HOM05D000189 ORTHO05D007610 1.7e-44 183.0 119 77.3
arahy.Tifrunner.gnm1.ann1.80CN8K Arachis hypogaea HOM05D000189 ORTHO05D007610 2.2e-44 182.6 120 75.8
arahy.Tifrunner.gnm1.ann1.BL8T0D Arachis hypogaea HOM05D000189 ORTHO05D007610 2.2e-44 182.6 120 75.8
Haze_09470 Corylus avellana HOM05D000189 ORTHO05D007610 2.2e-44 182.6 118 76.3
Cfa020551 Carpinus fangiana HOM05D000189 ORTHO05D007610 2.9e-44 182.2 118 75.4
TAR627G0923 Trochodendron aralioides HOM05D000189 ORTHO05D007610 5.0e-44 181.4 118 77.1
QL08p019941 Quercus lobata HOM05D000189 ORTHO05D007610 1.4e-43 179.9 118 75.4
CAN.G162.73 Capsicum annuum HOM05D000189 ORTHO05D007610 1.9e-43 179.5 118 73.7
Potri.011G121900 Populus trichocarpa HOM05D000189 ORTHO05D007610 4.2e-43 178.3 118 73.7
Lalb_Chr01g0016951 Lupinus albus HOM05D000189 ORTHO05D007610 7.2e-43 177.6 120 70.0
Nn1g04025 Nelumbo nucifera HOM05D000189 ORTHO05D007610 7.2e-43 177.6 119 78.2
Glyma.12G222600 Glycine max HOM05D000189 ORTHO05D007610 9.4e-43 177.2 120 73.3
Glyma.13G279000 Glycine max HOM05D000189 ORTHO05D007610 1.2e-42 176.8 120 73.3
PGR083G1580 Punica granatum HOM05D000189 ORTHO05D007610 1.2e-42 176.8 118 71.2
Nn1g06601 Nelumbo nucifera HOM05D000189 ORTHO05D007610 1.6e-42 176.4 118 75.4
Manes.03G113000 Manihot esculenta HOM05D000189 ORTHO05D007610 2.1e-42 176.0 118 73.7
Oeu037220.2 Olea europaea HOM05D000189 ORTHO05D007610 2.7e-42 175.6 118 71.2
Potri.001G402800 Populus trichocarpa HOM05D000189 ORTHO05D007610 2.7e-42 175.6 118 72.9
TWI38G0123 Tripterygium wilfordii HOM05D000189 ORTHO05D007610 2.7e-42 175.6 121 73.6
PSO675G7556 Papaver somniferum HOM05D000189 ORTHO05D007610 3.6e-42 175.3 117 74.4
Cpa.g.sc80.39 Carica papaya HOM05D000189 ORTHO05D007610 4.7e-42 174.9 139 67.6
Lj1g0026593 Lotus japonicus HOM05D000189 ORTHO05D007610 1.4e-41 173.3 120 69.2
Sabra16G0264400 Salix brachista HOM05D000189 ORTHO05D007610 1.8e-41 172.9 122 71.3
Cc05_g12320 Coffea canephora HOM05D000189 ORTHO05D007610 2.3e-41 172.6 117 70.9
Lsat_1_v5_gn_7_105101 Lactuca sativa HOM05D000189 ORTHO05D007610 2.3e-41 172.6 119 72.3
VMungo1080G0459 Vigna mungo HOM05D000189 ORTHO05D007610 2.3e-41 172.6 121 71.9
COL.COLO4_09428 Corchorus olitorius HOM05D000189 ORTHO05D007610 8.8e-41 170.6 119 73.9
MBI18_g17007_MAGBIO Magnolia biondii HOM05D000189 ORTHO05D007610 8.8e-41 170.6 121 72.7
Thecc.07G077500 Theobroma cacao HOM05D000189 ORTHO05D007610 8.8e-41 170.6 119 73.1
Eucgr.F01102 Eucalyptus grandis HOM05D000189 ORTHO05D007610 1.1e-40 170.2 121 70.2
vmacro11857 Vaccinium macrocarpon HOM05D000189 ORTHO05D007610 1.1e-40 170.2 120 69.2
Ciclev10008120m.g Citrus clementina HOM05D000189 ORTHO05D007610 1.5e-40 169.9 115 74.8
Prupe.4G185200 Prunus persica HOM05D000189 ORTHO05D007610 1.5e-40 169.9 117 70.9
Sabra11G0107900 Salix brachista HOM05D000189 ORTHO05D007610 2.6e-40 169.1 118 69.5
Sc06g0006570 Simmondsia chinensis HOM05D000189 ORTHO05D007610 3.3e-40 168.7 117 70.1
Aa31LG8G2670 Aethionema arabicum HOM05D000189 ORTHO05D007610 4.4e-40 168.3 118 71.2
CiPaw.12G120600 Carya illinoinensis HOM05D000189 ORTHO05D007610 9.7e-40 167.2 118 73.7
MD11G1243000 Malus domestica HOM05D000189 ORTHO05D007610 9.7e-40 167.2 118 72.0
PGSC0003DMG400012425 Solanum tuberosum HOM05D000189 ORTHO05D007610 1.3e-39 166.8 118 68.6
TWI39G0466 Tripterygium wilfordii HOM05D000189 ORTHO05D007610 1.3e-39 166.8 121 71.9
PSO541G2036 Papaver somniferum HOM05D000189 ORTHO05D007610 1.7e-39 166.4 118 72.0
MSTRG.15218 Avicennia marina HOM05D000189 ORTHO05D007610 2.2e-39 166.0 118 71.2
THA.LOC104818063 Tarenaya hassleriana HOM05D000189 ORTHO05D007610 2.2e-39 166.0 118 68.6
Medtr2g079610 Medicago truncatula HOM05D000189 ORTHO05D007610 4.8e-39 164.9 120 66.7
AL3G27980 Arabidopsis lyrata HOM05D000189 ORTHO05D007610 8.2e-39 164.1 120 66.7
FvH4_3g20530 Fragaria vesca HOM05D000189 ORTHO05D007610 8.2e-39 164.1 114 71.1
Solyc07g063300.3 Solanum lycopersicum HOM05D000189 ORTHO05D007610 8.2e-39 164.1 118 67.8
AT3G15430 Arabidopsis thaliana HOM05D000189 ORTHO05D007610 1.1e-38 163.7 120 66.7
EL10Ac4g08130 Beta vulgaris HOM05D000189 ORTHO05D007610 1.4e-38 163.3 108 72.2
Thhalv10020606m.g Eutrema salsugineum HOM05D000189 ORTHO05D007610 1.4e-38 163.3 118 67.8
Duzib170G0640 Durio zibethinus HOM05D000189 ORTHO05D007610 1.8e-38 162.9 119 69.7
Sopen07g031470 Solanum pennellii HOM05D000189 ORTHO05D007610 1.8e-38 162.9 118 67.8
Sp3g13680 Schrenkiella parvula HOM05D000189 ORTHO05D007610 2.4e-38 162.5 118 66.9
Nitab4.5_0003769g0050 Nicotiana tabacum HOM05D000189 ORTHO05D007610 3.1e-38 162.2 118 66.1
Aqoxy1G02540 Aquilegia oxysepala HOM05D000189 ORTHO05D007610 5.3e-38 161.4 119 67.2
Migut.M00854 Erythranthe guttata HOM05D000189 ORTHO05D007610 5.3e-38 161.4 119 68.1
BolC1t04867H Brassica oleracea HOM05D000189 ORTHO05D007610 9.1e-38 160.6 119 68.1
FAN11G3846 Fragaria x ananassa HOM05D000189 ORTHO05D007610 9.1e-38 160.6 113 71.7
Gorai.009G434600 Gossypium raimondii HOM05D000189 ORTHO05D007610 9.1e-38 160.6 119 68.9
A01p38740 Brassica napus HOM05D000189 ORTHO05D007610 1.2e-37 160.2 119 67.2
BraA01t03911Z Brassica rapa HOM05D000189 ORTHO05D007610 1.2e-37 160.2 119 67.2
Rhsim06G0196700 Rhododendron simsii HOM05D000189 ORTHO05D007610 1.6e-37 159.8 122 70.5
FAN21G2912 Fragaria x ananassa HOM05D000189 ORTHO05D007610 2.0e-37 159.5 114 70.2
C01p49040 Brassica napus HOM05D000189 ORTHO05D007610 2.6e-37 159.1 119 67.2
Carub.0003s1516 Capsella rubella HOM05D000189 ORTHO05D007610 2.6e-37 159.1 120 65.0
FAN16G0845 Fragaria x ananassa HOM05D000189 ORTHO05D007610 3.5e-37 158.7 130 62.3
BcaB06g29574 Brassica carinata HOM05D000189 ORTHO05D007610 4.5e-37 158.3 112 68.8
FAN25G0732 Fragaria x ananassa HOM05D000189 ORTHO05D007610 7.7e-37 157.5 129 62.8
RcHm_v2.0_Chr5g0034451 Rosa chinensis HOM05D000189 ORTHO05D007610 7.7e-37 157.5 114 68.4
SGA_v2.0_scaffold73G24292 Striga asiatica HOM05D000189 ORTHO05D007610 7.7e-37 157.5 118 65.3
Peaxi162Scf00998g00019 Petunia axillaris HOM05D000189 ORTHO05D007610 1.3e-36 156.8 119 65.5
BcaB04g20926 Brassica carinata HOM05D000189 ORTHO05D007610 1.7e-36 156.4 119 65.5
AUR62029360 Chenopodium quinoa HOM05D000189 ORTHO05D007610 1.7e-36 156.4 111 69.4
Ah.04g165120 Amaranthus hybridus HOM05D000189 ORTHO05D007610 6.5e-36 154.5 109 68.8
Duzib213G0598 Durio zibethinus HOM05D000189 ORTHO05D007610 6.5e-36 154.5 123 66.7
Gohir.D05G358740 Gossypium hirsutum HOM05D000189 ORTHO05D007610 1.1e-35 153.7 119 67.2
Hund22947 Selenicereus undatus HOM05D000189 ORTHO05D007610 1.9e-35 152.9 110 67.3
Psat5g245160 Pisum sativum HOM05D000189 ORTHO05D007610 2.5e-35 152.5 120 59.2
HPP92_028527 Vanilla planifolia HOM05D000189 ORTHO05D007610 9.4e-35 150.6 118 63.6
A05p33980 Brassica napus HOM05D000189 ORTHO05D007610 1.4e-33 146.7 114 65.8
BraA05t22220Z Brassica rapa HOM05D000189 ORTHO05D007610 1.4e-33 146.7 114 65.8
CsaV3_4G033830 Cucumis sativus L. HOM05D000189 ORTHO05D007610 1.4e-33 146.7 107 66.4
MELO3C016710.2 Cucumis melo HOM05D000189 ORTHO05D007610 2.3e-33 146.0 107 66.4
BcaC05g29009 Brassica carinata HOM05D000189 ORTHO05D007610 3.0e-33 145.6 114 65.8
BolC5t33859H Brassica oleracea HOM05D000189 ORTHO05D007610 3.0e-33 145.6 114 65.8
C05p51730 Brassica napus HOM05D000189 ORTHO05D007610 4.0e-33 145.2 114 64.9
AUR62034255 Chenopodium quinoa HOM05D000189 ORTHO05D007610 5.2e-33 144.8 127 59.8
TPR.G38945 Trifolium pratense HOM05D000189 ORTHO05D007610 1.5e-32 143.3 110 65.5
HanXRQChr11g0328341 Helianthus annuus HOM05D000189 ORTHO05D007610 4.4e-32 141.7 120 64.2
Sed0004906 Sechium edule HOM05D000189 ORTHO05D007610 4.4e-32 141.7 112 64.3
Nitab4.5_0010521g0030 Nicotiana tabacum HOM05D000189 ORTHO05D007610 2.2e-31 139.4 97 68.0
DCAR_013089 Daucus carota HOM05D000189 ORTHO05D007610 3.7e-31 138.7 121 62.8
CDE02G4643 Ceratophyllum demersum HOM05D000189 ORTHO05D007610 4.8e-31 138.3 118 59.3
ClCG11G018180 Citrullus lanatus HOM05D000189 ORTHO05D007610 8.2e-31 137.5 102 64.7
CARHR090480 Cardamine hirsuta HOM05D000189 ORTHO05D007610 1.1e-30 137.1 118 60.2
ECA236G1002 Erigeron canadensis HOM05D000189 ORTHO05D007610 4.5e-29 131.7 110 63.6
ATR0680G337 Amborella trichopoda HOM05D000189 ORTHO05D007610 1.3e-28 130.2 118 55.1
BcaC09g48507 Brassica carinata HOM05D000189 ORTHO05D023418 3.0e-25 119.0 94 61.7
SEGI_03212 Sequoiadendron giganteum HOM05D000189 ORTHO05D007610 2.8e-23 112.5 120 50.0
Zm00001eb096520 Zea mays HOM05D000189 ORTHO05D007610 1.1e-19 100.5 113 49.6
Os07g0459400 Oryza sativa ssp. japonica HOM05D000189 ORTHO05D007610 1.5e-19 100.1 113 50.4
Ah.09g226840 Amaranthus hybridus HOM05D000189 ORTHO05D023418 7.2e-19 97.8 65 69.2
Zm00001eb306630 Zea mays HOM05D000189 ORTHO05D007610 1.0e-17 94.0 113 48.7
Pp3c2_32690 Physcomitrium patens HOM05D000189 ORTHO05D007610 2.8e-15 85.9 103 41.7
Ah.01g003710 Amaranthus hybridus HOM05D005630 ORTHO05D006979 3.1e-14 82.4 61 65.6
Mapoly0080s0011 Marchantia polymorpha HOM05D000189 ORTHO05D007610 5.4e-14 81.6 107 39.3
C09p34360 Brassica napus HOM05D000189 ORTHO05D023418 2.3e-12 76.3 71 62.0
HPP92_028532 Vanilla planifolia HOM05D000189 ORTHO05D023418 4.3e-11 72.0 58 58.6
Manes.15G085700 Manihot esculenta HOM05D000189 ORTHO05D007610 9.5e-11 70.9 42 78.6
AagrBONN_evm.TU.Sc2ySwM_344.938 Anthoceros agrestis HOM05D000189 ORTHO05D007610 1.0e-09 67.4 97 38.1
PGR119G0120 Punica granatum HOM05D003736 ORTHO05D004451 1.3e-07 60.5 89 37.1
Medtr3g086300 Medicago truncatula HOM05D003736 ORTHO05D004451 2.2e-07 59.7 89 37.1
arahy.Tifrunner.gnm1.ann1.N26GU2 Arachis hypogaea HOM05D003736 ORTHO05D004451 4.9e-07 58.5 91 35.2
CBR_g39552 Chara braunii HOM05D000189 ORTHO05D004451 4.9e-07 58.5 92 33.7
A02p34270 Brassica napus HOM05D003736 ORTHO05D004451 6.4e-07 58.2 89 37.1
CiPaw.05G176100 Carya illinoinensis HOM05D003736 ORTHO05D004451 6.4e-07 58.2 89 37.1
BcaB07g30238 Brassica carinata HOM05D003736 ORTHO05D004451 8.3e-07 57.8 89 37.1
A06p42250 Brassica napus HOM05D003736 ORTHO05D004451 8.3e-07 57.8 89 37.1
C07p35110 Brassica napus HOM05D003736 ORTHO05D004451 8.3e-07 57.8 89 36.0
BraA02t08442Z Brassica rapa HOM05D003736 ORTHO05D004451 8.3e-07 57.8 89 37.1
BraA06t27141Z Brassica rapa HOM05D003736 ORTHO05D004451 8.3e-07 57.8 89 37.1
AL5G14810 Arabidopsis lyrata HOM05D003736 ORTHO05D004451 1.1e-06 57.4 89 37.1
CDE07G2065 Ceratophyllum demersum HOM05D003736 ORTHO05D004451 1.1e-06 57.4 89 36.0
Phvul.002G253100 Phaseolus vulgaris HOM05D003736 ORTHO05D004451 1.1e-06 57.4 91 36.3
VMungo0251G0097 Vigna mungo HOM05D003736 ORTHO05D004451 1.1e-06 57.4 91 36.3
BcaB07g30622 Brassica carinata HOM05D003736 ORTHO05D004451 1.4e-06 57.0 89 37.1
BolC7t44039H Brassica oleracea HOM05D003736 ORTHO05D004451 1.4e-06 57.0 89 36.0
CDE04G0925 Ceratophyllum demersum HOM05D003736 ORTHO05D004451 1.4e-06 57.0 89 36.0
Ca_25123_v3 Cicer arietinum L. HOM05D003736 ORTHO05D004451 1.4e-06 57.0 89 36.0
Dinv11025 Davidia involucrata HOM05D003736 ORTHO05D004451 1.4e-06 57.0 89 36.0
Thhalv10003973m.g Eutrema salsugineum HOM05D003736 ORTHO05D004451 1.4e-06 57.0 89 36.0
Lalb_Chr07g0185561 Lupinus albus HOM05D003736 ORTHO05D004451 1.9e-06 56.6 89 36.0
PGR102G2024 Punica granatum HOM05D003736 ORTHO05D004451 1.9e-06 56.6 89 34.8
Sp2g15300 Schrenkiella parvula HOM05D003736 ORTHO05D004451 1.9e-06 56.6 89 36.0
TWI36G0960 Tripterygium wilfordii HOM05D003736 ORTHO05D004451 1.9e-06 56.6 89 34.8
Migut.E00225 Erythranthe guttata HOM05D003736 ORTHO05D004451 2.4e-06 56.2 103 33.0
Glyma.05G172400 Glycine max HOM05D003736 ORTHO05D004451 2.4e-06 56.2 89 36.0
Lj6g0025031 Lotus japonicus HOM05D003736 ORTHO05D004451 2.4e-06 56.2 89 33.7
Sc11g0000810 Simmondsia chinensis HOM05D003736 ORTHO05D004451 2.4e-06 56.2 89 37.1
BcaC03g17315 Brassica carinata HOM05D003736 ORTHO05D004451 3.2e-06 55.8 89 36.0
C02p52620 Brassica napus HOM05D003736 ORTHO05D004451 3.2e-06 55.8 89 36.0
BolC2t11337H Brassica oleracea HOM05D003736 ORTHO05D004451 3.2e-06 55.8 89 36.0
Carub.0005s0398 Capsella rubella HOM05D003736 ORTHO05D004451 3.2e-06 55.8 89 34.8
Glyma.11G245000 Glycine max HOM05D003736 ORTHO05D004451 3.2e-06 55.8 91 34.1
HanXRQChr12g0385841 Helianthus annuus HOM05D003736 ORTHO05D004451 3.2e-06 55.8 89 36.0
MD13G1106500 Malus domestica HOM05D003736 ORTHO05D004451 3.2e-06 55.8 89 36.0
TPR.G20619 Trifolium pratense HOM05D003736 ORTHO05D004451 3.2e-06 55.8 89 36.0
TWI75G1115 Tripterygium wilfordii HOM05D003736 ORTHO05D004451 3.2e-06 55.8 89 34.8
ATR0824G030 Amborella trichopoda HOM05D003736 ORTHO05D004451 4.1e-06 55.5 90 35.6
HanXRQChr17g0569191 Helianthus annuus HOM05D003736 ORTHO05D004451 4.1e-06 55.5 91 36.3
PSO017G5809 Papaver somniferum HOM05D003736 ORTHO05D004451 4.1e-06 55.5 89 34.8
PSO478G2199 Papaver somniferum HOM05D003736 ORTHO05D004451 4.1e-06 55.5 89 34.8
Aqoxy3G01356 Aquilegia oxysepala HOM05D003736 ORTHO05D004451 5.4e-06 55.1 89 36.0
CARHR147100 Cardamine hirsuta HOM05D003736 ORTHO05D004451 5.4e-06 55.1 89 36.0
MD16G1106600 Malus domestica HOM05D003736 ORTHO05D004451 5.4e-06 55.1 89 36.0
Potri.015G009400 Populus trichocarpa HOM05D003736 ORTHO05D004451 5.4e-06 55.1 89 34.8
Prupe.1G239800 Prunus persica HOM05D003736 ORTHO05D004451 5.4e-06 55.1 89 34.8
Solyc05g014030.3 Solanum lycopersicum HOM05D003736 ORTHO05D004451 5.4e-06 55.1 89 34.8
Sopen05g008980 Solanum pennellii HOM05D003736 ORTHO05D004451 5.4e-06 55.1 89 34.8
THA.LOC104805262 Tarenaya hassleriana HOM05D003736 ORTHO05D004451 5.4e-06 55.1 89 34.8
BcaC04g21403 Brassica carinata HOM05D003736 ORTHO05D004451 7.0e-06 54.7 89 36.0
A09p25160 Brassica napus HOM05D003736 ORTHO05D004451 7.0e-06 54.7 89 36.0
C09p32220 Brassica napus HOM05D003736 ORTHO05D004451 7.0e-06 54.7 89 36.0
BolC9t56068H Brassica oleracea HOM05D003736 ORTHO05D004451 7.0e-06 54.7 89 36.0
BraA09t38103Z Brassica rapa HOM05D003736 ORTHO05D004451 7.0e-06 54.7 89 36.0
Cpa.g.sc33.92 Carica papaya HOM05D003736 ORTHO05D004451 7.0e-06 54.7 89 34.8
THA.LOC104825541 Tarenaya hassleriana HOM05D003736 ORTHO05D004451 7.0e-06 54.7 89 32.6
TWI18G1196 Tripterygium wilfordii HOM05D003736 ORTHO05D004451 7.0e-06 54.7 89 33.7
Duzib251G0873 Durio zibethinus HOM05D003736 ORTHO05D004451 9.2e-06 54.3 89 36.0
ECA234G0585 Erigeron canadensis HOM05D003736 ORTHO05D004451 9.2e-06 54.3 89 36.0
Sed0008937 Sechium edule HOM05D003736 ORTHO05D004451 9.2e-06 54.3 89 34.8


User provided reference genes

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