Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv04293 Davidia involucrata HOM05D007910 ORTHO05D010001 5.1e-96 354.4 175 100.0
Dinv04291 Davidia involucrata HOM05D007910 ORTHO05D010001 5.9e-84 314.3 164 94.5
vmacro21871 Vaccinium macrocarpon HOM05D007910 ORTHO05D010001 2.6e-47 192.6 166 60.8
GSVIVG01021777001 Vitis vinifera HOM05D007910 ORTHO05D010001 9.8e-47 190.7 171 56.7
Rhsim13G0124900 Rhododendron simsii HOM05D007910 ORTHO05D010001 8.3e-46 187.6 164 59.1
Lj1A1158T20 Lonicera japonica HOM05D007910 ORTHO05D010001 1.1e-45 187.2 163 58.9
Nn026s41567 Nelumbo nucifera HOM05D007910 ORTHO05D010001 1.7e-43 179.9 164 53.7
Nn7g37803 Nelumbo nucifera HOM05D007910 ORTHO05D010001 1.7e-43 179.9 164 53.7
TAR626G1265 Trochodendron aralioides HOM05D007910 ORTHO05D010001 2.3e-43 179.5 166 56.6
MBI18_g46679_MAGBIO Magnolia biondii HOM05D007910 ORTHO05D010001 1.1e-42 177.2 164 54.3
FAN21G2734 Fragaria x ananassa HOM05D007910 ORTHO05D010001 7.2e-42 174.5 173 49.7
FvH4_3g11180 Fragaria vesca HOM05D007910 ORTHO05D010001 9.5e-42 174.1 170 50.0
RcHm_v2.0_Chr5g0018091 Rosa chinensis HOM05D007910 ORTHO05D010001 9.5e-42 174.1 173 50.3
Prupe.4G100500 Prunus persica HOM05D007910 ORTHO05D010001 8.0e-41 171.0 171 54.4
MD05G1265400 Malus domestica HOM05D007910 ORTHO05D010001 1.4e-40 170.2 169 52.1
Manes.06G051900 Manihot esculenta HOM05D007910 ORTHO05D010001 1.8e-40 169.9 172 50.6
Haze_05938 Corylus avellana HOM05D007910 ORTHO05D010001 3.0e-40 169.1 165 50.9
FAN16G2635 Fragaria x ananassa HOM05D007910 ORTHO05D010001 3.0e-40 169.1 175 48.6
Ciclev10017495m.g Citrus clementina HOM05D007910 ORTHO05D010001 4.4e-39 165.2 175 49.7
Oeu000507.1 Olea europaea HOM05D007910 ORTHO05D010001 1.7e-38 163.3 145 56.6
QL05p064520 Quercus lobata HOM05D007910 ORTHO05D010001 2.2e-38 162.9 171 50.9
Atru.chr10.696 Acer truncatum HOM05D007910 ORTHO05D010001 1.8e-37 159.8 178 50.6
Cc02_g32890 Coffea canephora HOM05D007910 ORTHO05D010001 1.8e-37 159.8 175 51.4
MD10G1243400 Malus domestica HOM05D007910 ORTHO05D010001 3.2e-37 159.1 177 49.2
Potri.011G157600 Populus trichocarpa HOM05D007910 ORTHO05D010001 2.0e-36 156.4 165 49.7
DCAR_003146 Daucus carota HOM05D007910 ORTHO05D010001 2.7e-36 156.0 146 56.2
FAN25G2020 Fragaria x ananassa HOM05D007910 ORTHO05D010001 5.9e-36 154.8 145 53.1
COL.COLO4_26877 Corchorus olitorius HOM05D007910 ORTHO05D010001 2.3e-35 152.9 171 49.1
Duzib160G0797 Durio zibethinus HOM05D007910 ORTHO05D010001 8.6e-35 151.0 175 48.6
CiPaw.09G147500 Carya illinoinensis HOM05D007910 ORTHO05D010001 1.5e-34 150.2 167 49.1
Ca_18305_v3 Cicer arietinum L. HOM05D007910 ORTHO05D010001 3.3e-34 149.1 164 45.7
Medtr4g094462 Medicago truncatula HOM05D007910 ORTHO05D010001 4.3e-34 148.7 166 45.8
CiPaw.09G170900 Carya illinoinensis HOM05D007910 ORTHO05D010001 9.5e-34 147.5 167 48.5
TWI15G0993 Tripterygium wilfordii HOM05D007910 ORTHO05D010001 1.0e-32 144.1 156 47.4
Psat7g094240 Pisum sativum HOM05D007910 ORTHO05D010001 3.1e-32 142.5 176 40.3
Sabra11G0142500 Salix brachista HOM05D007910 ORTHO05D010001 2.6e-31 139.4 164 45.7
Aqoxy1G01509 Aquilegia oxysepala HOM05D007910 ORTHO05D010001 5.8e-31 138.3 155 44.5
Thhalv10027352m.g Eutrema salsugineum HOM05D007910 ORTHO05D010001 5.8e-31 138.3 147 44.2
Carub.0007s2066 Capsella rubella HOM05D007910 ORTHO05D010001 1.3e-30 137.1 150 46.0
Lj4g0005622 Lotus japonicus HOM05D007910 ORTHO05D010001 1.7e-30 136.7 166 44.0
TPR.G23797 Trifolium pratense HOM05D007910 ORTHO05D010001 1.7e-30 136.7 161 47.2
Sp7g18860 Schrenkiella parvula HOM05D007910 ORTHO05D010001 1.4e-29 133.7 145 45.5
A03p52480 Brassica napus HOM05D007910 ORTHO05D010001 3.2e-29 132.5 149 45.0
CARHR227330 Cardamine hirsuta HOM05D007910 ORTHO05D010001 3.2e-29 132.5 148 44.6
AL7G33360 Arabidopsis lyrata HOM05D007910 ORTHO05D010001 4.1e-29 132.1 150 42.0
AT4G20790 Arabidopsis thaliana HOM05D007910 ORTHO05D010001 4.1e-29 132.1 150 42.0
BcaNung05061 Brassica carinata HOM05D007910 ORTHO05D010001 4.1e-29 132.1 149 43.6
C07p50930 Brassica napus HOM05D007910 ORTHO05D010001 4.1e-29 132.1 149 43.6
BolC7t45593H Brassica oleracea HOM05D007910 ORTHO05D010001 4.1e-29 132.1 149 43.6
BraA03t14325Z Brassica rapa HOM05D007910 ORTHO05D010001 4.1e-29 132.1 149 45.0
Migut.M01922 Erythranthe guttata HOM05D007910 ORTHO05D010001 5.4e-29 131.7 157 42.7
PSO541G4848 Papaver somniferum HOM05D007910 ORTHO05D010001 5.4e-29 131.7 165 42.4
PSO675G3196 Papaver somniferum HOM05D007910 ORTHO05D010001 5.4e-29 131.7 165 43.0
ATR0579G098 Amborella trichopoda HOM05D007910 ORTHO05D010001 1.6e-28 130.2 148 43.9
arahy.Tifrunner.gnm1.ann1.BNP38Z Arachis hypogaea HOM05D007910 ORTHO05D010001 1.6e-28 130.2 165 47.9
Eucgr.K01975 Eucalyptus grandis HOM05D007910 ORTHO05D010001 3.5e-28 129.0 168 41.7
Phvul.002G201400 Phaseolus vulgaris HOM05D007910 ORTHO05D010001 4.6e-28 128.6 163 41.7
BcaNung04152 Brassica carinata HOM05D007910 ORTHO05D010001 7.8e-28 127.9 149 43.6
A01p12210 Brassica napus HOM05D007910 ORTHO05D010001 1.3e-27 127.1 149 42.3
BraA01t01162Z Brassica rapa HOM05D007910 ORTHO05D010001 1.3e-27 127.1 149 42.3
Glyma.05G124200 Glycine max HOM05D007910 ORTHO05D010001 1.3e-27 127.1 158 43.0
C01p14520 Brassica napus HOM05D007910 ORTHO05D010001 3.9e-27 125.6 149 43.0
BolC1t01408H Brassica oleracea HOM05D007910 ORTHO05D010001 3.9e-27 125.6 149 43.0
BcaC09g51309 Brassica carinata HOM05D007910 ORTHO05D010001 8.6e-27 124.4 149 43.0
Gorai.011G006900 Gossypium raimondii HOM05D007910 ORTHO05D010001 8.6e-27 124.4 149 43.6
ClCG03G008550 Citrullus lanatus HOM05D007910 ORTHO05D010001 1.5e-26 123.6 161 40.4
Aa31LG6G2880 Aethionema arabicum HOM05D007910 ORTHO05D010001 3.3e-26 122.5 152 43.4
BcaNung05682 Brassica carinata HOM05D007910 ORTHO05D010001 5.6e-26 121.7 149 41.6
Gohir.D10G006000 Gossypium hirsutum HOM05D007910 ORTHO05D010001 5.6e-26 121.7 149 43.0
Gohir.A10G006000 Gossypium hirsutum HOM05D007910 ORTHO05D010001 1.2e-25 120.6 149 43.6
Sed0009557 Sechium edule HOM05D007910 ORTHO05D010001 2.1e-25 119.8 161 39.8
Cfa000773 Carpinus fangiana HOM05D007910 ORTHO05D010001 2.8e-25 119.4 166 41.6
SalBow8G4650 Salvia bowleyana HOM05D007910 ORTHO05D010001 2.8e-25 119.4 161 43.5
MELO3C002871.2 Cucumis melo HOM05D007910 ORTHO05D010001 4.9e-22 108.6 161 39.1
VMungo0251G0673 Vigna mungo HOM05D007910 ORTHO05D010001 1.9e-21 106.7 150 39.3
Glyma.08G079400 Glycine max HOM05D007910 ORTHO05D010001 5.4e-21 105.1 165 40.0
CsaV3_1G037620 Cucumis sativus L. HOM05D007910 ORTHO05D010001 9.2e-21 104.4 148 39.9
TAR625G0685 Trochodendron aralioides HOM05D000021 ORTHO05D000010 1.5e-07 60.5 163 29.4
Os06g0587200 Oryza sativa ssp. japonica HOM05D000021 ORTHO05D000010 2.0e-07 60.1 102 30.4
Potri.001G042500 Populus trichocarpa HOM05D000021 ORTHO05D000010 2.0e-07 60.1 171 28.7
CiPaw.01G256200 Carya illinoinensis HOM05D000021 ORTHO05D000010 3.4e-07 59.3 170 29.4
Ciclev10027227m.g Citrus clementina HOM05D000021 ORTHO05D000010 3.4e-07 59.3 170 27.1
Lj3g0003606 Lotus japonicus HOM05D000026 ORTHO05D000094 3.4e-07 59.3 171 26.9
Aqoxy7G02388 Aquilegia oxysepala HOM05D000021 ORTHO05D000010 4.4e-07 58.9 168 27.4
Glyma.13G371200 Glycine max HOM05D000021 ORTHO05D000010 4.4e-07 58.9 168 28.0
TAR383G0089 Trochodendron aralioides HOM05D000021 ORTHO05D000010 4.4e-07 58.9 171 28.1
Actinidia08938 Actinidia chinensis HOM05D000021 ORTHO05D000010 5.8e-07 58.5 168 27.4
Nn8g40010 Nelumbo nucifera HOM05D000021 ORTHO05D000010 5.8e-07 58.5 168 27.4
Prupe.3G102400 Prunus persica HOM05D000021 ORTHO05D000010 5.8e-07 58.5 169 26.6
SEGI_41500 Sequoiadendron giganteum HOM05D000021 ORTHO05D000010 7.6e-07 58.2 172 24.4
Eucgr.F03981 Eucalyptus grandis HOM05D000021 ORTHO05D000010 9.9e-07 57.8 171 29.2
Psat5g271560 Pisum sativum HOM05D000026 ORTHO05D000094 9.9e-07 57.8 192 24.5
PGR102G2698 Punica granatum HOM05D000021 ORTHO05D000010 9.9e-07 57.8 167 26.9
QL05p036804 Quercus lobata HOM05D000021 ORTHO05D000010 9.9e-07 57.8 177 26.0
Actinidia36868 Actinidia chinensis HOM05D000021 ORTHO05D000010 1.3e-06 57.4 168 25.6
Lj3g0008897 Lotus japonicus HOM05D000026 ORTHO05D000094 1.3e-06 57.4 172 28.5
SEGI_00753 Sequoiadendron giganteum HOM05D000021 ORTHO05D000010 1.3e-06 57.4 181 24.3
SEGI_15640 Sequoiadendron giganteum HOM05D000021 ORTHO05D000010 1.3e-06 57.4 181 23.2
Glyma.13G296300 Glycine max HOM05D000026 ORTHO05D000094 1.7e-06 57.0 178 25.3
Gohir.A06G114300 Gossypium hirsutum HOM05D000021 ORTHO05D000010 1.7e-06 57.0 169 27.2
SEGI_22743 Sequoiadendron giganteum HOM05D000021 ORTHO05D000010 1.7e-06 57.0 181 24.3
FAN09G0830 Fragaria x ananassa HOM05D000021 ORTHO05D000010 2.9e-06 56.2 172 26.7
FAN09G2029 Fragaria x ananassa HOM05D000021 ORTHO05D000010 2.9e-06 56.2 172 26.7
Manes.12G089066 Manihot esculenta HOM05D000026 ORTHO05D000094 2.9e-06 56.2 167 28.7
Phvul.010G060800 Phaseolus vulgaris HOM05D000026 ORTHO05D000094 2.9e-06 56.2 172 29.1
MELO3C010204.2 Cucumis melo HOM05D000021 ORTHO05D000010 3.8e-06 55.8 203 25.6
Manes.06G031500 Manihot esculenta HOM05D000021 ORTHO05D000010 3.8e-06 55.8 169 27.2
TPR.G6434 Trifolium pratense HOM05D000026 ORTHO05D000094 3.8e-06 55.8 193 24.9
TPR.G6451 Trifolium pratense HOM05D000026 ORTHO05D000094 3.8e-06 55.8 171 24.6
vmacro16843 Vaccinium macrocarpon HOM05D000021 ORTHO05D000010 3.8e-06 55.8 169 24.9
Gorai.010G136200 Gossypium raimondii HOM05D000021 ORTHO05D000010 4.9e-06 55.5 169 26.6
Lj3g0010341 Lotus japonicus HOM05D000026 ORTHO05D000094 4.9e-06 55.5 181 24.9
Os07g0575750 Oryza sativa ssp. japonica HOM05D000026 ORTHO05D000094 6.4e-06 55.1 129 29.5
Rhsim12G0185600 Rhododendron simsii HOM05D000021 ORTHO05D000010 6.4e-06 55.1 169 24.3
THA.LOC104806285 Tarenaya hassleriana HOM05D000026 ORTHO05D000094 6.4e-06 55.1 172 26.7
THA.LOC104809726 Tarenaya hassleriana HOM05D000029 ORTHO05D006810 6.4e-06 55.1 189 27.5
Thecc.06G045500 Theobroma cacao HOM05D000021 ORTHO05D000010 6.4e-06 55.1 77 35.1
GSVIVG01029149001 Vitis vinifera HOM05D000021 ORTHO05D000010 6.4e-06 55.1 184 23.4
ClCG06G012590 Citrullus lanatus HOM05D000021 ORTHO05D000010 8.4e-06 54.7 194 24.7
FvH4_6g28380 Fragaria vesca HOM05D000021 ORTHO05D000010 8.4e-06 54.7 173 25.4
FAN05G5679 Fragaria x ananassa HOM05D000021 ORTHO05D000010 8.4e-06 54.7 172 25.6
FAN14G2192 Fragaria x ananassa HOM05D000021 ORTHO05D000010 8.4e-06 54.7 173 25.4
Lj3g0025903 Lotus japonicus HOM05D000029 ORTHO05D006810 8.4e-06 54.7 185 27.6
Nitab4.5_0005631g0030 Nicotiana tabacum HOM05D000021 ORTHO05D000010 8.4e-06 54.7 131 22.9
SEGI_25794 Sequoiadendron giganteum HOM05D000021 ORTHO05D000010 8.4e-06 54.7 185 22.2
Zm00001eb099720 Zea mays HOM05D000021 ORTHO05D000010 8.4e-06 54.7 166 25.9
Zm00001eb313280 Zea mays HOM05D000021 ORTHO05D000010 8.4e-06 54.7 166 25.3


User provided reference genes

Program Settings