Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv04141 Davidia involucrata HOM05D005522 ORTHO05D007414 1.0e-145 520.0 251 100.0
Dinv04140 Davidia involucrata HOM05D005522 ORTHO05D007414 1.8e-139 499.2 241 100.0
Dinv18487 Davidia involucrata HOM05D005522 ORTHO05D007414 1.3e-121 439.9 241 89.2
Hma1.2p1_0056F.1_g031850 Hydrangea macrophylla HOM05D005522 ORTHO05D007414 8.6e-121 437.2 241 87.6
QL07p006599 Quercus lobata HOM05D005522 ORTHO05D007414 3.3e-120 435.3 248 83.9
Actinidia39175 Actinidia chinensis HOM05D005522 ORTHO05D007414 9.5e-120 433.7 241 86.3
Thecc.05G141500 Theobroma cacao HOM05D005522 ORTHO05D007414 1.6e-119 433.0 241 84.2
RhsimUnG0217500 Rhododendron simsii HOM05D005522 ORTHO05D007414 2.8e-119 432.2 247 84.6
Duzib093G0281 Durio zibethinus HOM05D005522 ORTHO05D007414 3.6e-119 431.8 241 84.2
vmacro07825 Vaccinium macrocarpon HOM05D005522 ORTHO05D007414 3.6e-119 431.8 241 86.7
GSVIVG01033574001 Vitis vinifera HOM05D005522 ORTHO05D007414 3.6e-119 431.8 239 87.4
Atru.chr1.1278 Acer truncatum HOM05D005522 ORTHO05D007414 1.1e-118 430.3 244 84.4
CSS0038435 Camellia sinensis var. sinensis HOM05D005522 ORTHO05D007414 1.1e-118 430.3 241 86.3
Haze_19737 Corylus avellana HOM05D005522 ORTHO05D007414 2.3e-118 429.1 243 85.6
Cpa.g.sc5.195 Carica papaya HOM05D005522 ORTHO05D007414 5.2e-118 427.9 241 85.1
CiPaw.10G038000 Carya illinoinensis HOM05D005522 ORTHO05D007414 5.2e-118 427.9 233 88.0
Peaxi162Scf00767g00611 Petunia axillaris HOM05D005522 ORTHO05D007414 2.0e-117 426.0 238 84.9
Rhsim03G0034500 Rhododendron simsii HOM05D005522 ORTHO05D007414 2.0e-117 426.0 241 85.9
Cfa016729 Carpinus fangiana HOM05D005522 ORTHO05D007414 4.4e-117 424.9 243 84.8
COL.COLO4_33937 Corchorus olitorius HOM05D005522 ORTHO05D007414 4.4e-117 424.9 246 82.1
TAR171G0004 Trochodendron aralioides HOM05D005522 ORTHO05D007414 5.8e-117 424.5 231 87.4
Sabra16G0043500 Salix brachista HOM05D005522 ORTHO05D007414 1.3e-116 423.3 247 81.8
MSTRG.19821 Avicennia marina HOM05D005522 ORTHO05D007414 1.7e-116 422.9 241 81.7
Cc06_g18590 Coffea canephora HOM05D005522 ORTHO05D007414 4.9e-116 421.4 236 84.7
CAN.G641.42 Capsicum annuum HOM05D005522 ORTHO05D007414 6.4e-116 421.0 238 83.2
Thhalv10010214m.g Eutrema salsugineum HOM05D005522 ORTHO05D007414 6.4e-116 421.0 231 86.6
Lj2A394T33 Lonicera japonica HOM05D005522 ORTHO05D007414 8.3e-116 420.6 242 85.5
Sp5g14030 Schrenkiella parvula HOM05D005522 ORTHO05D007414 8.3e-116 420.6 231 86.6
MD00G1074000 Malus domestica HOM05D005522 ORTHO05D007414 1.1e-115 420.2 234 85.9
A06p19740 Brassica napus HOM05D005522 ORTHO05D007414 1.4e-115 419.9 231 86.1
BraA06t25053Z Brassica rapa HOM05D005522 ORTHO05D007414 1.4e-115 419.9 231 86.1
Gohir.A11G308400 Gossypium hirsutum HOM05D005522 ORTHO05D007414 1.4e-115 419.9 241 82.6
Lj5g0015939 Lotus japonicus HOM05D005522 ORTHO05D007414 1.4e-115 419.9 233 85.4
AL5G27240 Arabidopsis lyrata HOM05D005522 ORTHO05D007414 2.4e-115 419.1 231 86.1
Carub.0005s1405 Capsella rubella HOM05D005522 ORTHO05D007414 2.4e-115 419.1 230 86.5
Gorai.007G353900 Gossypium raimondii HOM05D005522 ORTHO05D007414 2.4e-115 419.1 241 82.2
TWI77G0538 Tripterygium wilfordii HOM05D005522 ORTHO05D007414 2.4e-115 419.1 241 83.4
Sopen10g030110 Solanum pennellii HOM05D005522 ORTHO05D007414 3.2e-115 418.7 233 85.0
AT3G47930 Arabidopsis thaliana HOM05D005522 ORTHO05D007414 5.4e-115 417.9 231 85.7
Nitab4.5_0013059g0010 Nicotiana tabacum HOM05D005522 ORTHO05D007414 5.4e-115 417.9 241 81.7
FAN02G3261 Fragaria x ananassa HOM05D005522 ORTHO05D007414 7.1e-115 417.5 234 86.8
Solyc10g079470.3 Solanum lycopersicum HOM05D005522 ORTHO05D007414 7.1e-115 417.5 229 85.2
BcaB01g00861 Brassica carinata HOM05D005522 ORTHO05D007414 9.2e-115 417.2 231 85.7
BcaC01g01764 Brassica carinata HOM05D005522 ORTHO05D007414 9.2e-115 417.2 231 85.3
C03p72160 Brassica napus HOM05D005522 ORTHO05D007414 9.2e-115 417.2 231 85.3
BolC3t19512H Brassica oleracea HOM05D005522 ORTHO05D007414 9.2e-115 417.2 231 85.3
MBI03_g36664_MAGBIO Magnolia biondii HOM05D005522 ORTHO05D007414 9.2e-115 417.2 229 85.6
Prupe.7G046300 Prunus persica HOM05D005522 ORTHO05D007414 9.2e-115 417.2 235 83.4
FAN05G4952 Fragaria x ananassa HOM05D005522 ORTHO05D007414 1.2e-114 416.8 234 86.3
Manes.08G056700 Manihot esculenta HOM05D005522 ORTHO05D007414 1.2e-114 416.8 236 84.3
THA.LOC104816408 Tarenaya hassleriana HOM05D005522 ORTHO05D007414 1.6e-114 416.4 233 85.0
Eucgr.A02267 Eucalyptus grandis HOM05D005522 ORTHO05D007414 3.5e-114 415.2 231 85.7
RcHm_v2.0_Chr2g0124941 Rosa chinensis HOM05D005522 ORTHO05D007414 3.5e-114 415.2 234 85.9
Sed0013105 Sechium edule HOM05D005522 ORTHO05D007414 3.5e-114 415.2 230 85.2
CANSAT80G2685 Cannabis sativa HOM05D005522 ORTHO05D007414 4.6e-114 414.8 241 80.5
ClCG04G004060 Citrullus lanatus HOM05D005522 ORTHO05D007414 4.6e-114 414.8 230 85.7
CsaV3_UNG143090 Cucumis sativus L. HOM05D005522 ORTHO05D007414 4.6e-114 414.8 230 85.7
FAN09G3441 Fragaria x ananassa HOM05D005522 ORTHO05D007414 4.6e-114 414.8 235 85.1
MBI03_g28429_MAGBIO Magnolia biondii HOM05D005522 ORTHO05D007414 4.6e-114 414.8 229 85.2
Oeu062462.1 Olea europaea HOM05D005522 ORTHO05D007414 4.6e-114 414.8 241 81.3
AUR62030366 Chenopodium quinoa HOM05D005522 ORTHO05D007414 7.8e-114 414.1 234 82.9
Glyma.02G166300 Glycine max HOM05D005522 ORTHO05D007414 7.8e-114 414.1 233 85.0
FvH4_6g25110 Fragaria vesca HOM05D005522 ORTHO05D007414 1.0e-113 413.7 234 85.5
FAN14G2465 Fragaria x ananassa HOM05D005522 ORTHO05D007414 1.0e-113 413.7 234 85.5
Lalb_Chr02g0156511 Lupinus albus HOM05D005522 ORTHO05D007414 1.0e-113 413.7 233 83.7
VMungo0720G1534 Vigna mungo HOM05D005522 ORTHO05D007414 1.0e-113 413.7 228 86.4
Ca_21519_v3 Cicer arietinum L. HOM05D005522 ORTHO05D007414 1.7e-113 412.9 230 84.3
arahy.Tifrunner.gnm1.ann1.36JCD8 Arachis hypogaea HOM05D005522 ORTHO05D007414 3.9e-113 411.8 233 83.3
HanXRQChr13g0391861 Helianthus annuus HOM05D005522 ORTHO05D007414 3.9e-113 411.8 240 79.6
Medtr1g050360 Medicago truncatula HOM05D005522 ORTHO05D007414 3.9e-113 411.8 233 82.8
arahy.Tifrunner.gnm1.ann1.86D3P6 Arachis hypogaea HOM05D005522 ORTHO05D007414 5.1e-113 411.4 233 83.3
CANSAT80G0471 Cannabis sativa HOM05D005522 ORTHO05D007414 5.1e-113 411.4 241 80.1
Sc19g0008330 Simmondsia chinensis HOM05D005522 ORTHO05D007414 8.6e-113 410.6 234 82.1
SalBow6G2663 Salvia bowleyana HOM05D005522 ORTHO05D007414 1.1e-112 410.2 234 81.2
EL10Ac3g07189 Beta vulgaris HOM05D005522 ORTHO05D007414 1.9e-112 409.5 234 82.9
DCAR_020543 Daucus carota HOM05D005522 ORTHO05D007414 1.9e-112 409.5 228 84.6
Aa31LG4G16570 Aethionema arabicum HOM05D005522 ORTHO05D007414 2.5e-112 409.1 230 84.8
PGSC0003DMG400008132 Solanum tuberosum HOM05D005522 ORTHO05D007414 2.5e-112 409.1 238 81.9
AUR62040849 Chenopodium quinoa HOM05D005522 ORTHO05D007414 4.3e-112 408.3 234 81.2
Hund24634 Selenicereus undatus HOM05D005522 ORTHO05D007414 4.3e-112 408.3 232 83.6
TPR.G8835 Trifolium pratense HOM05D005522 ORTHO05D007414 4.3e-112 408.3 230 83.9
Ah.04g151150 Amaranthus hybridus HOM05D005522 ORTHO05D007414 5.6e-112 407.9 234 83.3
SGA_v2.0_scaffold69G23141 Striga asiatica HOM05D005522 ORTHO05D007414 5.6e-112 407.9 242 80.6
Phvul.007G247900 Phaseolus vulgaris HOM05D005522 ORTHO05D007414 7.3e-112 407.5 233 83.3
MELO3C020736.2 Cucumis melo HOM05D005522 ORTHO05D007414 9.5e-112 407.1 227 85.0
Migut.J01682 Erythranthe guttata HOM05D005522 ORTHO05D007414 3.1e-110 402.1 233 80.3
PSO384G4421 Papaver somniferum HOM05D005522 ORTHO05D007414 3.1e-110 402.1 232 82.3
Os11g0143500 Oryza sativa ssp. japonica HOM05D005522 ORTHO05D007414 6.8e-110 401.0 228 80.7
Aqoxy1G00339 Aquilegia oxysepala HOM05D005522 ORTHO05D007414 2.6e-109 399.1 233 81.1
Os12g0139600 Oryza sativa ssp. japonica HOM05D005522 ORTHO05D007414 4.4e-109 398.3 228 80.3
ECA248G3368 Erigeron canadensis HOM05D005522 ORTHO05D007414 7.6e-109 397.5 238 79.0
Lsat_1_v5_gn_5_159221 Lactuca sativa HOM05D005522 ORTHO05D007414 4.9e-108 394.8 229 79.5
Ciclev10004603m.g Citrus clementina HOM05D005522 ORTHO05D007414 2.4e-107 392.5 241 80.1
Zm00001eb093120 Zea mays HOM05D005522 ORTHO05D007414 3.3e-104 382.1 226 78.8
Nitab4.5_0002267g0070 Nicotiana tabacum HOM05D005522 ORTHO05D007414 1.4e-102 376.7 234 77.8
HPP92_018215 Vanilla planifolia HOM05D005522 ORTHO05D007414 6.4e-100 367.9 225 76.9
ATR0721G040 Amborella trichopoda HOM05D005522 ORTHO05D007414 3.2e-99 365.5 222 78.4
SEGI_02017 Sequoiadendron giganteum HOM05D005522 ORTHO05D007414 1.1e-94 350.5 249 65.5
SHI24609 Sapria himalayana HOM05D005522 ORTHO05D007414 8.4e-92 340.9 231 71.4
CDE08G1189 Ceratophyllum demersum HOM05D005522 ORTHO05D007414 6.0e-90 334.7 193 83.9
Prupe.7G046500 Prunus persica HOM05D005522 ORTHO05D007414 1.3e-87 327.0 208 76.0
Pp3c14_20870 Physcomitrium patens HOM05D005522 ORTHO05D007414 2.4e-86 322.8 223 66.4
Mapoly0077s0021 Marchantia polymorpha HOM05D005522 ORTHO05D007414 6.9e-86 321.2 227 63.9
Glyma.10G104100 Glycine max HOM05D005522 ORTHO05D007414 1.7e-84 316.6 181 81.2
CBR_g48422 Chara braunii HOM05D005522 ORTHO05D007414 4.8e-79 298.5 239 61.1
Gohir.D11G323800 Gossypium hirsutum HOM05D005522 ORTHO05D007414 5.8e-77 291.6 241 63.1
SMO146G0252 Selaginella moellendorffii HOM05D005522 ORTHO05D007414 4.6e-74 282.0 219 59.4
BcaB02g10682 Brassica carinata HOM05D005522 ORTHO05D007414 2.8e-71 272.7 155 83.2
Potri.016G040300 Populus trichocarpa HOM05D005522 ORTHO05D007414 4.6e-66 255.4 150 80.7
AagrBONN_evm.TU.Sc2ySwM_362.2734 Anthoceros agrestis HOM05D005522 ORTHO05D007414 3.3e-64 249.2 179 62.6
Potri.006G043232 Populus trichocarpa HOM05D005522 ORTHO05D007414 2.8e-63 246.1 144 82.6
Medtr0506s0040 Medicago truncatula HOM05D005522 ORTHO05D007414 4.5e-61 238.8 134 81.3
PRCOL_00005871 Prasinoderma coloniale HOM05D005522 ORTHO05D007414 6.5e-60 235.0 248 47.6
CARHR156640 Cardamine hirsuta HOM05D005522 ORTHO05D007414 4.2e-59 232.3 137 80.3
MCO07G495 Micromonas commoda HOM05D005522 ORTHO05D007414 2.2e-52 209.9 224 46.9
CARHR156650 Cardamine hirsuta HOM05D005522 ORTHO05D007414 2.2e-44 183.3 102 85.3
C03p66920 Brassica napus HOM05D005522 ORTHO05D040474 8.5e-44 181.4 145 65.5
Cre13.g567100 Chlamydomonas reinhardtii HOM05D005522 ORTHO05D007414 3.5e-37 159.5 241 40.2
Zm00001eb368650 Zea mays HOM05D001023 ORTHO05D000912 2.2e-36 156.8 98 76.5
Sabra06G0029500 Salix brachista HOM05D005522 ORTHO05D007414 7.0e-22 108.6 103 56.3
Prupe.7G046600 Prunus persica HOM05D005522 ORTHO05D007414 7.7e-21 105.1 64 78.1
Sabra06G0029400 Salix brachista HOM05D002155 ORTHO05D002215 2.1e-18 97.1 74 66.2
MD12G1091400 Malus domestica HOM05D005522 ORTHO05D048680 1.7e-15 87.4 53 77.4
Zm00001eb025280 Zea mays HOM05D005522 ORTHO05D048680 1.1e-14 84.7 50 72.0
VMungo0251G1166 Vigna mungo HOM05D009237 ORTHO05D007414 3.2e-06 56.6 103 36.9
BolC3t18965H Brassica oleracea HOM05D005522 ORTHO05D040474 9.2e-06 55.1 84 40.5


User provided reference genes

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