Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv04007 Davidia involucrata HOM05D008239 ORTHO05D009800 6.6e-257 890.2 444 100.0
Dinv21189 Davidia involucrata HOM05D008239 ORTHO05D009800 3.0e-169 599.0 375 82.4
Dinv27632 Davidia involucrata HOM05D008239 ORTHO05D009800 4.2e-102 375.9 467 50.5
Dinv07268 Davidia involucrata HOM05D008239 ORTHO05D009800 4.3e-99 365.9 499 45.7
Dinv38087 Davidia involucrata HOM05D008239 ORTHO05D009800 2.1e-69 267.3 352 44.6
Dinv23282 Davidia involucrata HOM05D008239 ORTHO05D009800 4.6e-69 266.2 465 39.4
Dinv30486 Davidia involucrata HOM05D010983 ORTHO05D009800 6.5e-63 245.7 293 46.1
Dinv42358 Davidia involucrata HOM05D008239 ORTHO05D009800 1.2e-56 224.9 404 38.9
Dinv42361 Davidia involucrata HOM05D008239 ORTHO05D009800 1.1e-49 201.8 273 42.9
Dinv23281 Davidia involucrata HOM05D008239 ORTHO05D009800 2.8e-42 177.2 398 33.2
Dinv12606 Davidia involucrata HOM05D008239 ORTHO05D009800 1.4e-41 174.9 333 38.1
Dinv25412 Davidia involucrata HOM05D008239 ORTHO05D009800 1.1e-38 165.2 455 32.3
Dinv42357 Davidia involucrata HOM05D008239 ORTHO05D009800 1.1e-38 165.2 483 29.8
Dinv41180 Davidia involucrata HOM05D008239 ORTHO05D009800 7.2e-38 162.5 286 34.6
Dinv30439 Davidia involucrata HOM05D008239 ORTHO05D009800 5.7e-35 152.9 263 37.6
Dinv38088 Davidia involucrata HOM05D008239 ORTHO05D009800 5.7e-35 152.9 427 31.4
Dinv12600 Davidia involucrata HOM05D008239 ORTHO05D009800 8.3e-34 149.1 291 35.4
Dinv30487 Davidia involucrata HOM05D008239 ORTHO05D009800 1.1e-30 138.7 319 33.2
Dinv41765 Davidia involucrata HOM05D008239 ORTHO05D009800 1.2e-27 128.6 477 28.7
Cc03_g02640 Coffea canephora HOM05D008239 ORTHO05D009800 3.7e-26 123.6 293 31.1
Hma1.2p1_0120F.1_g057080 Hydrangea macrophylla HOM05D008239 ORTHO05D009800 3.5e-24 117.1 347 30.8
Rhsim06G0231700 Rhododendron simsii HOM05D008239 ORTHO05D009800 2.9e-23 114.0 245 32.7
Rhsim03G0008000 Rhododendron simsii HOM05D008239 ORTHO05D009800 1.2e-21 108.6 457 28.2
Dinv41768 Davidia involucrata HOM05D018862 ORTHO05D009800 1.4e-20 105.1 304 32.2
Dinv25440 Davidia involucrata HOM05D008239 ORTHO05D009800 5.2e-20 103.2 284 31.0
MD09G1050300 Malus domestica HOM05D007472 ORTHO05D009477 3.4e-19 100.5 275 29.5
Cc02_g10110 Coffea canephora HOM05D008239 ORTHO05D009800 4.4e-19 100.1 293 30.0
Dinv25443 Davidia involucrata HOM05D008239 ORTHO05D009800 1.3e-18 98.6 469 24.7
Dinv27633 Davidia involucrata HOM05D008239 ORTHO05D009800 1.4e-17 95.1 351 28.2
THA.LOC104805462 Tarenaya hassleriana HOM05D007472 ORTHO05D009477 1.9e-17 94.7 207 30.4
Dinv41766 Davidia involucrata HOM05D008239 ORTHO05D009800 2.4e-17 94.4 479 26.3
Cc02_g10120 Coffea canephora HOM05D008239 ORTHO05D009800 3.2e-17 94.0 290 30.7
TWI60G0556 Tripterygium wilfordii HOM05D007472 ORTHO05D009477 4.1e-17 93.6 293 30.4
Prupe.3G268600 Prunus persica HOM05D007472 ORTHO05D009477 1.6e-16 91.7 243 30.9
Haze_14546 Corylus avellana HOM05D007472 ORTHO05D009477 7.8e-16 89.4 243 30.9
PGR142G1798 Punica granatum HOM05D007472 ORTHO05D009477 1.7e-15 88.2 290 29.0
DCAR_023498 Daucus carota HOM05D008239 ORTHO05D009800 2.3e-15 87.8 225 34.2
Dinv21165 Davidia involucrata HOM05D008239 ORTHO05D009800 3.9e-15 87.0 85 52.9
Cfa007540 Carpinus fangiana HOM05D007472 ORTHO05D009477 8.6e-15 85.9 281 28.8
TAR622G0243 Trochodendron aralioides HOM05D007472 ORTHO05D009477 8.6e-15 85.9 213 29.1
RcHm_v2.0_Chr2g0168671 Rosa chinensis HOM05D007472 ORTHO05D009477 1.1e-14 85.5 215 29.8
COL.COLO4_17209 Corchorus olitorius HOM05D008239 ORTHO05D009800 1.5e-14 85.1 297 28.3
Dinv20749 Davidia involucrata HOM05D018862 ORTHO05D009800 1.9e-14 84.7 287 29.6
COL.COLO4_19868 Corchorus olitorius HOM05D008239 ORTHO05D009800 3.3e-14 84.0 363 22.9
Dinv25441 Davidia involucrata HOM05D008239 ORTHO05D009800 4.3e-14 83.6 213 28.2
Potri.004G129100 Populus trichocarpa HOM05D007472 ORTHO05D009477 4.3e-14 83.6 250 28.8
Dinv04006 Davidia involucrata HOM05D008239 ORTHO05D009800 1.2e-13 82.0 163 31.9
Manes.01G090001 Manihot esculenta HOM05D007472 ORTHO05D009477 1.2e-13 82.0 238 29.0
QL04p014916 Quercus lobata HOM05D007472 ORTHO05D009477 1.2e-13 82.0 296 28.4
Aa31LG2G4320 Aethionema arabicum HOM05D007472 ORTHO05D009477 1.6e-13 81.6 217 28.6
QL04p014554 Quercus lobata HOM05D007472 ORTHO05D009477 1.6e-13 81.6 296 28.0
Carub.0005s0743 Capsella rubella HOM05D007472 ORTHO05D009477 2.1e-13 81.3 278 25.5
Aqoxy1G01920 Aquilegia oxysepala HOM05D007472 ORTHO05D009477 4.7e-13 80.1 275 25.8
Sp2g17510 Schrenkiella parvula HOM05D007472 ORTHO05D009477 4.7e-13 80.1 278 25.2
Cc02_g10150 Coffea canephora HOM05D008239 ORTHO05D009800 8.1e-13 79.3 329 25.5
COL.COLO4_17217 Corchorus olitorius HOM05D008239 ORTHO05D009800 8.1e-13 79.3 294 27.6
COL.COLO4_12090 Corchorus olitorius HOM05D008239 ORTHO05D009800 1.4e-12 78.6 299 29.1
COL.COLO4_19875 Corchorus olitorius HOM05D008239 ORTHO05D009800 1.8e-12 78.2 280 25.7
Dinv24381 Davidia involucrata HOM05D008239 ORTHO05D009800 3.1e-12 77.4 85 50.6
Thecc.04G080300 Theobroma cacao HOM05D007472 ORTHO05D009477 5.2e-12 76.6 280 28.6
FAN02G3469 Fragaria x ananassa HOM05D007472 ORTHO05D009477 6.8e-12 76.3 205 28.8
MBI14_g12118_MAGBIO Magnolia biondii HOM05D007472 ORTHO05D009477 8.9e-12 75.9 212 27.4
FvH4_6g48800 Fragaria vesca HOM05D007472 ORTHO05D009477 3.4e-11 73.9 205 27.8
ATR0037G017 Amborella trichopoda HOM05D007472 ORTHO05D009477 4.4e-11 73.6 220 26.4
FvH4_6g49850 Fragaria vesca HOM05D007472 ORTHO05D009477 5.8e-11 73.2 244 25.8
FAN05G4432 Fragaria x ananassa HOM05D007472 ORTHO05D009477 5.8e-11 73.2 205 27.8
AUR62037189 Chenopodium quinoa HOM05D025186 ORTHO05D009800 9.8e-11 72.4 221 30.8
Dinv41767 Davidia involucrata HOM05D018862 ORTHO05D009800 2.9e-10 70.9 290 25.2
SEGI_07251 Sequoiadendron giganteum HOM05D007472 ORTHO05D009477 3.7e-10 70.5 296 23.0
Os07g0515700 Oryza sativa ssp. japonica HOM05D013330 ORTHO05D009800 6.4e-10 69.7 303 27.4
SHI06832 Sapria himalayana HOM05D007472 ORTHO05D000001 1.9e-09 68.2 251 26.7
EL10Ac3g05534 Beta vulgaris HOM05D025186 ORTHO05D009800 4.1e-09 67.0 222 30.2
BcaB07g30111 Brassica carinata HOM05D007472 ORTHO05D009477 5.4e-09 66.6 219 26.0
Os10g0102200 Oryza sativa ssp. japonica HOM05D013330 ORTHO05D009800 1.6e-08 65.1 184 32.1
Os07g0515900 Oryza sativa ssp. japonica HOM05D013330 ORTHO05D009800 2.1e-08 64.7 256 27.7
Gohir.D07G211400 Gossypium hirsutum HOM05D007472 ORTHO05D009477 2.7e-08 64.3 213 28.6
Gorai.001G238800 Gossypium raimondii HOM05D007472 ORTHO05D009477 2.7e-08 64.3 213 28.6
Ciclev10011009m.g Citrus clementina HOM05D007472 ORTHO05D009477 3.5e-08 63.9 251 27.5
Gohir.A07G205200 Gossypium hirsutum HOM05D007472 ORTHO05D009477 4.6e-08 63.5 206 29.1
EL10Ac2g02974 Beta vulgaris HOM05D007472 ORTHO05D009477 6.0e-08 63.2 323 25.4
COL.COLO4_16500 Corchorus olitorius HOM05D008239 ORTHO05D009800 7.8e-08 62.8 155 34.2
Rhsim03G0097700 Rhododendron simsii HOM05D008239 ORTHO05D009800 5.1e-07 60.1 124 31.5
AUR62030492 Chenopodium quinoa HOM05D025186 ORTHO05D009800 6.6e-07 59.7 102 36.3
COL.COLO4_27100 Corchorus olitorius HOM05D008239 ORTHO05D009800 8.6e-07 59.3 243 30.5
COL.COLO4_12089 Corchorus olitorius HOM05D008239 ORTHO05D009800 1.9e-06 58.2 295 25.4
FAN14G2920 Fragaria x ananassa HOM05D007472 ORTHO05D009477 7.3e-06 56.2 98 32.7
RcHm_v2.0_Chr6g0246231 Rosa chinensis HOM05D007472 ORTHO05D009477 9.5e-06 55.8 97 34.0


User provided reference genes

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