Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv04006 Davidia involucrata HOM05D008239 ORTHO05D009800 5.5e-181 637.5 319 100.0
Dinv27633 Davidia involucrata HOM05D008239 ORTHO05D009800 8.2e-84 314.7 308 58.8
Dinv42357 Davidia involucrata HOM05D008239 ORTHO05D009800 5.7e-61 238.8 315 47.9
Dinv38088 Davidia involucrata HOM05D008239 ORTHO05D009800 2.5e-56 223.4 282 49.6
Dinv30487 Davidia involucrata HOM05D008239 ORTHO05D009800 4.8e-52 209.1 201 56.7
Dinv23282 Davidia involucrata HOM05D008239 ORTHO05D009800 5.9e-50 202.2 213 54.0
Dinv23281 Davidia involucrata HOM05D008239 ORTHO05D009800 8.5e-49 198.4 247 46.6
Cc02_g10150 Coffea canephora HOM05D008239 ORTHO05D009800 1.2e-37 161.4 312 36.2
Dinv30439 Davidia involucrata HOM05D008239 ORTHO05D009800 1.0e-33 148.3 138 54.3
Cc02_g10110 Coffea canephora HOM05D008239 ORTHO05D009800 1.1e-32 144.8 322 35.4
Cc02_g10120 Coffea canephora HOM05D008239 ORTHO05D009800 3.6e-31 139.8 208 39.9
Dinv12606 Davidia involucrata HOM05D008239 ORTHO05D009800 6.2e-31 139.0 184 44.0
Dinv25412 Davidia involucrata HOM05D008239 ORTHO05D009800 1.5e-29 134.4 189 41.3
Dinv25443 Davidia involucrata HOM05D008239 ORTHO05D009800 1.3e-28 131.3 297 31.0
Hma1.2p1_0120F.1_g057080 Hydrangea macrophylla HOM05D008239 ORTHO05D009800 2.0e-26 124.0 177 42.4
Rhsim06G0231700 Rhododendron simsii HOM05D008239 ORTHO05D009800 2.0e-26 124.0 192 39.1
Dinv12600 Davidia involucrata HOM05D008239 ORTHO05D009800 6.0e-26 122.5 165 43.6
DCAR_023499 Daucus carota HOM05D008239 ORTHO05D009800 7.8e-26 122.1 189 40.7
Dinv27632 Davidia involucrata HOM05D008239 ORTHO05D009800 1.7e-25 120.9 307 31.3
Dinv25440 Davidia involucrata HOM05D008239 ORTHO05D009800 7.3e-24 115.5 176 38.1
vmacro22053 Vaccinium macrocarpon HOM05D008239 ORTHO05D009800 1.2e-23 114.8 203 36.5
Dinv41180 Davidia involucrata HOM05D008239 ORTHO05D009800 2.1e-23 114.0 150 42.7
Dinv41765 Davidia involucrata HOM05D008239 ORTHO05D009800 4.0e-22 109.8 179 41.3
CSS0028968 Camellia sinensis var. sinensis HOM05D008239 ORTHO05D009800 3.4e-21 106.7 139 43.2
Dinv38087 Davidia involucrata HOM05D008239 ORTHO05D009800 3.4e-21 106.7 199 36.7
Rhsim03G0008000 Rhododendron simsii HOM05D008239 ORTHO05D009800 1.3e-20 104.8 287 31.4
COL.COLO4_19868 Corchorus olitorius HOM05D008239 ORTHO05D009800 3.7e-20 103.2 200 32.5
Dinv42358 Davidia involucrata HOM05D008239 ORTHO05D009800 6.4e-20 102.4 296 28.4
Dinv41766 Davidia involucrata HOM05D008239 ORTHO05D009800 1.4e-19 101.3 331 28.1
COL.COLO4_12090 Corchorus olitorius HOM05D008239 ORTHO05D009800 3.2e-19 100.1 189 33.3
Dinv30486 Davidia involucrata HOM05D010983 ORTHO05D009800 8.6e-17 92.0 163 34.4
Rhsim03G0097700 Rhododendron simsii HOM05D008239 ORTHO05D009800 2.5e-16 90.5 192 31.8
COL.COLO4_04045 Corchorus olitorius HOM05D008239 ORTHO05D009800 7.3e-16 89.0 189 33.9
COL.COLO4_17209 Corchorus olitorius HOM05D008239 ORTHO05D009800 1.6e-15 87.8 181 33.7
COL.COLO4_17217 Corchorus olitorius HOM05D008239 ORTHO05D009800 1.6e-15 87.8 181 33.7
Dinv42361 Davidia involucrata HOM05D008239 ORTHO05D009800 2.1e-15 87.4 126 41.3
Dinv41768 Davidia involucrata HOM05D018862 ORTHO05D009800 6.2e-15 85.9 213 31.9
Cc03_g02640 Coffea canephora HOM05D008239 ORTHO05D009800 4.0e-14 83.2 170 30.6
COL.COLO4_16500 Corchorus olitorius HOM05D008239 ORTHO05D009800 6.8e-14 82.4 139 34.5
Dinv04007 Davidia involucrata HOM05D008239 ORTHO05D009800 2.6e-13 80.5 163 31.9
Rhsim13G0234400 Rhododendron simsii HOM05D008239 ORTHO05D009800 2.2e-12 77.4 125 36.8
Dinv07268 Davidia involucrata HOM05D008239 ORTHO05D009800 6.4e-12 75.9 141 33.3
Rhsim06G0198100 Rhododendron simsii HOM05D008239 ORTHO05D009800 1.9e-11 74.3 174 33.3
Cc00_g27060 Coffea canephora HOM05D008239 ORTHO05D009800 5.4e-11 72.8 148 37.2
Os05g0124000 Oryza sativa ssp. japonica HOM05D013330 ORTHO05D009800 1.6e-10 71.2 170 30.0
Dinv25441 Davidia involucrata HOM05D008239 ORTHO05D009800 1.5e-08 64.7 82 42.7
AUR62013258 Chenopodium quinoa HOM05D023548 ORTHO05D009800 5.6e-08 62.8 183 28.4
AUR62020016 Chenopodium quinoa HOM05D023548 ORTHO05D009800 5.6e-08 62.8 183 28.4
Dinv21189 Davidia involucrata HOM05D008239 ORTHO05D009800 5.6e-08 62.8 211 25.6
Os12g0118800 Oryza sativa ssp. japonica HOM05D013330 ORTHO05D009800 5.6e-08 62.8 171 25.7
AUR62013259 Chenopodium quinoa HOM05D023548 ORTHO05D009800 3.6e-07 60.1 194 27.8
AUR62020015 Chenopodium quinoa HOM05D023548 ORTHO05D009800 3.6e-07 60.1 194 27.8
COL.COLO4_24269 Corchorus olitorius HOM05D008239 ORTHO05D009800 4.7e-07 59.7 132 30.3
Os01g0942900 Oryza sativa ssp. japonica HOM05D013330 ORTHO05D009800 4.7e-07 59.7 182 28.0
Os01g0943800 Oryza sativa ssp. japonica HOM05D013330 ORTHO05D009800 4.7e-07 59.7 182 28.0
Os05g0124600 Oryza sativa ssp. japonica HOM05D013330 ORTHO05D009800 6.2e-07 59.3 172 27.3
Os11g0219400 Oryza sativa ssp. japonica HOM05D013330 ORTHO05D009800 8.1e-07 58.9 162 25.9
EL10Ac3g05534 Beta vulgaris HOM05D025186 ORTHO05D009800 1.8e-06 57.8 83 39.8
COL.COLO4_27100 Corchorus olitorius HOM05D008239 ORTHO05D009800 5.2e-06 56.2 152 31.6


User provided reference genes

Program Settings