Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv03958 Davidia involucrata HOM05D009454 ORTHO05D009427 1.4e-60 236.5 157 100.0
Actinidia10697 Actinidia chinensis HOM05D009454 ORTHO05D009427 1.8e-20 103.2 162 52.5
Actinidia35306 Actinidia chinensis HOM05D009454 ORTHO05D009427 1.5e-17 93.6 138 42.0
Haze_09576 Corylus avellana HOM05D009454 ORTHO05D009427 4.2e-17 92.0 146 42.5
TAR629G2024 Trochodendron aralioides HOM05D009454 ORTHO05D009427 4.2e-17 92.0 135 41.5
CiPaw.11G180600 Carya illinoinensis HOM05D009454 ORTHO05D009427 4.7e-16 88.6 142 42.3
Duzib170G0628 Durio zibethinus HOM05D009454 ORTHO05D009427 8.9e-15 84.3 136 39.7
Duzib213G0681 Durio zibethinus HOM05D009454 ORTHO05D009427 1.7e-13 80.1 141 36.9
Gorai.009G428800 Gossypium raimondii HOM05D009454 ORTHO05D009427 8.3e-13 77.8 76 52.6
Gohir.A04G023500 Gossypium hirsutum HOM05D009454 ORTHO05D009427 1.1e-12 77.4 76 52.6
TAR627G0356 Trochodendron aralioides HOM05D009454 ORTHO05D009427 1.4e-12 77.0 137 40.9
Prupe.4G197700 Prunus persica HOM05D009454 ORTHO05D009427 2.4e-12 76.3 134 40.3
Gohir.D05G363800 Gossypium hirsutum HOM05D009454 ORTHO05D009427 3.1e-12 75.9 76 52.6
TAR624G0118 Trochodendron aralioides HOM05D009454 ORTHO05D009427 3.1e-12 75.9 137 39.4
Nn1g06922 Nelumbo nucifera HOM05D009454 ORTHO05D009427 2.7e-11 72.8 135 36.3
MD11G1229800 Malus domestica HOM05D023596 ORTHO05D009427 2.9e-10 69.3 134 38.1
Thecc.07G059700 Theobroma cacao HOM05D009454 ORTHO05D009427 2.9e-10 69.3 140 35.0
TAR626G0489 Trochodendron aralioides HOM05D009454 ORTHO05D009427 3.8e-10 68.9 137 35.8
Ca_18836_v3 Cicer arietinum L. HOM05D012347 ORTHO05D009427 5.0e-10 68.6 135 34.1
Ca_30095_v3 Cicer arietinum L. HOM05D012347 ORTHO05D009427 5.0e-10 68.6 135 34.1
Gohir.D01G059100 Gossypium hirsutum HOM05D009454 ORTHO05D009427 8.6e-10 67.8 79 41.8
ClCG10G006150 Citrullus lanatus HOM05D023599 ORTHO05D009427 1.5e-09 67.0 146 34.9
Ciclev10009866m.g Citrus clementina HOM05D009454 ORTHO05D009427 1.9e-09 66.6 74 48.6
Gorai.002G080100 Gossypium raimondii HOM05D009454 ORTHO05D009427 2.5e-09 66.2 79 41.8
MELO3C016602.2 Cucumis melo HOM05D023599 ORTHO05D009427 4.3e-09 65.5 145 35.2
Phvul.011G145600 Phaseolus vulgaris HOM05D012347 ORTHO05D009427 7.3e-09 64.7 141 38.3
Manes.15G079100 Manihot esculenta HOM05D020515 ORTHO05D009427 9.5e-09 64.3 145 31.0
TWI38G2011 Tripterygium wilfordii HOM05D010083 ORTHO05D009427 9.5e-09 64.3 141 36.2
Hund02152 Selenicereus undatus HOM05D017899 ORTHO05D009427 1.2e-08 63.9 84 40.5
Dinv18549 Davidia involucrata HOM05D014456 ORTHO05D011476 2.1e-08 63.2 135 32.6
Gohir.A01G072300 Gossypium hirsutum HOM05D009454 ORTHO05D009427 2.1e-08 63.2 79 43.0
Potri.011G130400 Populus trichocarpa HOM05D020515 ORTHO05D009427 2.1e-08 63.2 143 33.6
Lalb_Chr19g0134651 Lupinus albus HOM05D012347 ORTHO05D009427 3.6e-08 62.4 147 35.4
Migut.H01874 Erythranthe guttata HOM05D017288 ORTHO05D009427 4.7e-08 62.0 76 52.6
Psat7g160160 Pisum sativum HOM05D012347 ORTHO05D009427 4.7e-08 62.0 133 35.3
Medtr4g081500 Medicago truncatula HOM05D012347 ORTHO05D009427 6.1e-08 61.6 135 34.1
CsaV3_3G005700 Cucumis sativus L. HOM05D023599 ORTHO05D009427 8.0e-08 61.2 146 33.6
TPR.G34097 Trifolium pratense HOM05D012347 ORTHO05D009427 1.0e-07 60.8 138 35.5
Oeu042882.1 Olea europaea HOM05D017288 ORTHO05D017865 1.4e-07 60.5 136 34.6
MBI02_g26224_MAGBIO Magnolia biondii HOM05D009454 ORTHO05D009427 1.8e-07 60.1 84 44.0
Dinv10899 Davidia involucrata HOM05D012535 ORTHO05D011476 3.0e-07 59.3 135 30.4
PGR031G1751 Punica granatum HOM05D009454 ORTHO05D009427 3.0e-07 59.3 77 45.5
Solyc07g063910.4 Solanum lycopersicum HOM05D017076 ORTHO05D017865 3.0e-07 59.3 137 35.8
Eucgr.K03519 Eucalyptus grandis HOM05D012347 ORTHO05D009427 5.2e-07 58.5 150 36.0
Aqoxy4G01911 Aquilegia oxysepala HOM05D035254 ORTHO05D031288 6.8e-07 58.2 135 28.9
CARHR267870 Cardamine hirsuta HOM05D010083 ORTHO05D009427 6.8e-07 58.2 86 44.2
Glyma.13G284800 Glycine max HOM05D023503 ORTHO05D009427 6.8e-07 58.2 77 40.3
arahy.Tifrunner.gnm1.ann1.T2T8RF Arachis hypogaea HOM05D012347 ORTHO05D009427 8.9e-07 57.8 143 31.5
Sed0000886 Sechium edule HOM05D023599 ORTHO05D009427 8.9e-07 57.8 138 30.4
Atru.chr2.3110 Acer truncatum HOM05D010083 ORTHO05D009427 1.2e-06 57.4 135 40.7
Atru.chr2.3135 Acer truncatum HOM05D010083 ORTHO05D009427 1.2e-06 57.4 135 40.7
FvH4_3g21550 Fragaria vesca HOM05D023596 ORTHO05D029380 1.2e-06 57.4 81 38.3
FAN11G2805 Fragaria x ananassa HOM05D023596 ORTHO05D029380 1.2e-06 57.4 81 38.3
FAN25G2266 Fragaria x ananassa HOM05D023596 ORTHO05D029380 1.2e-06 57.4 81 38.3
GSVIVG01030651001 Vitis vinifera HOM05D015989 ORTHO05D011476 1.2e-06 57.4 80 40.0
Aa31LG3G10530 Aethionema arabicum HOM05D010083 ORTHO05D009427 2.6e-06 56.2 89 37.1
arahy.Tifrunner.gnm1.ann1.4E7PXM Arachis hypogaea HOM05D012347 ORTHO05D009427 2.6e-06 56.2 143 32.2
Carub.0008s1485 Capsella rubella HOM05D010083 ORTHO05D009427 2.6e-06 56.2 88 36.4
MD03G1215100 Malus domestica HOM05D009454 ORTHO05D009427 2.6e-06 56.2 119 37.8
Oeu022213.2 Olea europaea HOM05D017076 ORTHO05D017865 2.6e-06 56.2 80 38.8
Ah.04g165150 Amaranthus hybridus HOM05D017899 ORTHO05D009427 3.4e-06 55.8 79 44.3
THA.LOC104809286 Tarenaya hassleriana HOM05D010083 ORTHO05D009427 3.4e-06 55.8 85 42.4
MSTRG.12947 Avicennia marina HOM05D017288 ORTHO05D009427 5.8e-06 55.1 141 34.0
Sopen07g032040 Solanum pennellii HOM05D017076 ORTHO05D017865 5.8e-06 55.1 80 46.2
EL10Ac4g08003 Beta vulgaris HOM05D017899 ORTHO05D009427 7.5e-06 54.7 89 40.4
Peaxi162Scf01365g00030 Petunia axillaris HOM05D017076 ORTHO05D017865 7.5e-06 54.7 74 47.3
Potri.001G409600 Populus trichocarpa HOM05D020515 ORTHO05D009427 7.5e-06 54.7 142 28.9
Cc05_g13040 Coffea canephora HOM05D017076 ORTHO05D017865 9.8e-06 54.3 100 34.0


User provided reference genes

Program Settings