Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv03875 Davidia involucrata HOM05D001662 ORTHO05D007520 5.2e-49 197.2 87 100.0
Oeu062794.1 Olea europaea HOM05D001662 ORTHO05D007520 1.3e-23 112.8 50 92.0
Oeu062796.1 Olea europaea HOM05D001662 ORTHO05D007520 1.3e-23 112.8 50 92.0
Oeu061907.1 Olea europaea HOM05D001662 ORTHO05D007520 1.4e-22 109.4 46 95.7
Peaxi162Scf00585g00110 Petunia axillaris HOM05D002440 ORTHO05D002576 7.1e-22 107.1 80 63.8
GSVIVG01026815001 Vitis vinifera HOM05D001662 ORTHO05D007520 7.1e-22 107.1 44 97.7
GSVIVG01031335001 Vitis vinifera HOM05D001662 ORTHO05D007520 7.1e-22 107.1 44 97.7
BolC7t44690H Brassica oleracea HOM05D001662 ORTHO05D007520 1.2e-21 106.3 45 93.3
Haze_15020 Corylus avellana HOM05D001662 ORTHO05D007520 1.2e-21 106.3 61 75.4
Medtr4g007410 Medicago truncatula HOM05D001662 ORTHO05D007520 2.7e-21 105.1 45 93.3
PGR142G3386 Punica granatum HOM05D001662 ORTHO05D007520 2.7e-21 105.1 46 91.3
QL03p013942 Quercus lobata HOM05D000001 ORTHO05D000003 2.7e-21 105.1 54 79.6
TPR.G14231 Trifolium pratense HOM05D001662 ORTHO05D007520 2.7e-21 105.1 46 95.7
Lj5g0007829 Lotus japonicus HOM05D001662 ORTHO05D007520 3.5e-21 104.8 56 78.6
AL3G16630 Arabidopsis lyrata HOM05D001662 ORTHO05D007520 4.6e-21 104.4 43 97.7
A06p36930 Brassica napus HOM05D001662 ORTHO05D007520 4.6e-21 104.4 45 93.3
Ciclev10006206m.g Citrus clementina HOM05D001662 ORTHO05D007520 4.6e-21 104.4 43 97.7
FAN02G1833 Fragaria x ananassa HOM05D001662 ORTHO05D007520 4.6e-21 104.4 44 93.2
Sed0008097 Sechium edule HOM05D001662 ORTHO05D007520 4.6e-21 104.4 51 86.3
PGSC0003DMG400018281 Solanum tuberosum HOM05D001662 ORTHO05D007520 4.6e-21 104.4 46 89.1
COL.COLO4_04114 Corchorus olitorius HOM05D001662 ORTHO05D007520 6.0e-21 104.0 44 95.5
FvH4_6g08560 Fragaria vesca HOM05D001662 ORTHO05D007520 6.0e-21 104.0 52 80.8
FvH4_6g43400 Fragaria vesca HOM05D001662 ORTHO05D007520 6.0e-21 104.0 49 85.7
A02p39060 Brassica napus HOM05D001662 ORTHO05D007520 1.0e-20 103.2 46 89.1
C02p58680 Brassica napus HOM05D001662 ORTHO05D007520 1.0e-20 103.2 46 89.1
BolC2t11928H Brassica oleracea HOM05D001662 ORTHO05D007520 1.0e-20 103.2 46 89.1
Migut.D01691 Erythranthe guttata HOM05D001662 ORTHO05D007520 1.0e-20 103.2 49 81.6
FAN05G0725 Fragaria x ananassa HOM05D001662 ORTHO05D007520 1.0e-20 103.2 47 87.2
TPR.G3331 Trifolium pratense HOM05D001662 ORTHO05D007520 1.0e-20 103.2 43 95.3
EL10Ac4g09568 Beta vulgaris HOM05D001662 ORTHO05D007520 1.3e-20 102.8 43 95.3
AUR62006823 Chenopodium quinoa HOM05D001662 ORTHO05D007520 1.3e-20 102.8 43 95.3
AL8G16030 Arabidopsis lyrata HOM05D001662 ORTHO05D007520 1.7e-20 102.4 42 97.6
AT3G05870 Arabidopsis thaliana HOM05D001662 ORTHO05D007520 1.7e-20 102.4 42 97.6
BcaB05g22003 Brassica carinata HOM05D001662 ORTHO05D007520 1.7e-20 102.4 43 95.3
BcaC03g17836 Brassica carinata HOM05D001662 ORTHO05D007520 1.7e-20 102.4 43 95.3
C07p41570 Brassica napus HOM05D001662 ORTHO05D007520 1.7e-20 102.4 43 95.3
CANSAT54G1905 Cannabis sativa HOM05D001662 ORTHO05D007520 1.7e-20 102.4 42 97.6
CiPaw.01G001400 Carya illinoinensis HOM05D001662 ORTHO05D007520 1.7e-20 102.4 42 97.6
ClCG09G010060 Citrullus lanatus HOM05D001662 ORTHO05D007520 1.7e-20 102.4 43 95.3
Cc10_g10070 Coffea canephora HOM05D001662 ORTHO05D007520 1.7e-20 102.4 42 97.6
DCAR_025400 Daucus carota HOM05D001662 ORTHO05D007520 1.7e-20 102.4 42 97.6
MD04G1186000 Malus domestica HOM05D001662 ORTHO05D007520 1.7e-20 102.4 42 97.6
Nitab4.5_0000081g0250 Nicotiana tabacum HOM05D001662 ORTHO05D007520 1.7e-20 102.4 42 97.6
Nitab4.5_0002572g0010 Nicotiana tabacum HOM05D001662 ORTHO05D007520 1.7e-20 102.4 42 97.6
Sp3g04760 Schrenkiella parvula HOM05D001662 ORTHO05D007520 1.7e-20 102.4 53 81.1
TWI36G1680 Tripterygium wilfordii HOM05D001662 ORTHO05D007520 1.7e-20 102.4 42 97.6
CAN.G1248.13 Capsicum annuum HOM05D001662 ORTHO05D007520 2.3e-20 102.1 63 69.8
Hund07269 Selenicereus undatus HOM05D001662 ORTHO05D007520 2.3e-20 102.1 43 93.0
Lj4g0014736 Lotus japonicus HOM05D001662 ORTHO05D007520 3.0e-20 101.7 42 95.2
Actinidia01661 Actinidia chinensis HOM05D001662 ORTHO05D007520 3.9e-20 101.3 42 95.2
BraA02t08875Z Brassica rapa HOM05D001662 ORTHO05D007520 3.9e-20 101.3 46 87.0
MELO3C028650.2 Cucumis melo HOM05D001662 ORTHO05D007520 3.9e-20 101.3 46 87.0
FAN02G1014 Fragaria x ananassa HOM05D001662 ORTHO05D007520 3.9e-20 101.3 42 95.2
FAN09G2109 Fragaria x ananassa HOM05D001662 ORTHO05D007520 3.9e-20 101.3 42 95.2
FAN14G0262 Fragaria x ananassa HOM05D001662 ORTHO05D007520 3.9e-20 101.3 42 95.2
FAN14G1181 Fragaria x ananassa HOM05D001662 ORTHO05D007520 3.9e-20 101.3 42 95.2
RcHm_v2.0_Chr1g0321441 Rosa chinensis HOM05D001662 ORTHO05D007520 3.9e-20 101.3 42 95.2
Sed0021388 Sechium edule HOM05D001662 ORTHO05D007520 3.9e-20 101.3 46 87.0
Hund21831 Selenicereus undatus HOM05D001662 ORTHO05D007520 3.9e-20 101.3 41 95.1
TWI75G1241 Tripterygium wilfordii HOM05D001662 ORTHO05D007520 3.9e-20 101.3 42 95.2
Nitab4.5_0001463g0140 Nicotiana tabacum HOM05D001662 ORTHO05D007520 5.1e-20 100.9 42 95.2
BcaB07g29943 Brassica carinata HOM05D001662 ORTHO05D007520 6.6e-20 100.5 42 95.2
BcaNung03684 Brassica carinata HOM05D001662 ORTHO05D007520 6.6e-20 100.5 42 95.2
BcaNung03905 Brassica carinata HOM05D001662 ORTHO05D007520 6.6e-20 100.5 42 95.2
CsaV3_7G024700 Cucumis sativus L. HOM05D001662 ORTHO05D007520 6.6e-20 100.5 42 95.2
Thhalv10005548m.g Eutrema salsugineum HOM05D001662 ORTHO05D007520 6.6e-20 100.5 42 95.2
Rhsim11G0105600 Rhododendron simsii HOM05D001662 ORTHO05D007520 6.6e-20 100.5 40 97.5
Aqoxy24s001 Aquilegia oxysepala HOM05D001662 ORTHO05D007520 8.6e-20 100.1 42 92.9
AUR62000480 Chenopodium quinoa HOM05D001662 ORTHO05D007520 8.6e-20 100.1 40 97.5
Nitab4.5_0002516g0040 Nicotiana tabacum HOM05D001662 ORTHO05D007520 8.6e-20 100.1 46 89.1
Os03g0302700 Oryza sativa ssp. japonica HOM05D001662 ORTHO05D007520 8.6e-20 100.1 43 90.7
SGA_v2.0_scaffold279G46779 Striga asiatica HOM05D001662 ORTHO05D007520 8.6e-20 100.1 42 92.9
unitig_8.g2972 Utricularia gibba HOM05D001662 ORTHO05D007520 8.6e-20 100.1 43 90.7
MD05G1140700 Malus domestica HOM05D001662 ORTHO05D007520 1.1e-19 99.8 39 100.0
Nitab4.5_0006117g0020 Nicotiana tabacum HOM05D001662 ORTHO05D007520 1.1e-19 99.8 39 100.0
Prupe.2G083700 Prunus persica HOM05D001662 ORTHO05D007520 1.1e-19 99.8 43 93.0
vmacro01666 Vaccinium macrocarpon HOM05D001662 ORTHO05D007520 1.1e-19 99.8 39 100.0
Duzib170G0793 Durio zibethinus HOM05D001662 ORTHO05D007520 1.5e-19 99.4 42 95.2
Gorai.013G252500 Gossypium raimondii HOM05D001662 ORTHO05D007520 1.5e-19 99.4 42 95.2
SHI10338 Sapria himalayana HOM05D001662 ORTHO05D007520 2.5e-19 98.6 50 80.0
SMO356G0205 Selaginella moellendorffii HOM05D001662 ORTHO05D007520 2.5e-19 98.6 43 88.4
Lsat_1_v5_gn_5_34581 Lactuca sativa HOM05D001662 ORTHO05D007520 3.3e-19 98.2 46 89.1
Ah.06g190750 Amaranthus hybridus HOM05D001662 ORTHO05D007520 4.3e-19 97.8 40 95.0
Os07g0411200 Oryza sativa ssp. japonica HOM05D001662 ORTHO05D007520 4.3e-19 97.8 43 88.4
CSS0010750 Camellia sinensis var. sinensis HOM05D001662 ORTHO05D007520 5.6e-19 97.4 53 75.5
ECA236G3263 Erigeron canadensis HOM05D001662 ORTHO05D007520 5.6e-19 97.4 42 90.5
PSO761G0719 Papaver somniferum HOM05D001662 ORTHO05D007520 5.6e-19 97.4 45 86.7
SGA_v2.0_scaffold117G32418 Striga asiatica HOM05D001662 ORTHO05D007520 9.5e-19 96.7 39 94.9
MBI18_g25058_MAGBIO Magnolia biondii HOM05D001662 ORTHO05D007520 1.6e-18 95.9 43 88.4
THA.LOC104818757 Tarenaya hassleriana HOM05D001662 ORTHO05D007520 2.1e-18 95.5 42 90.5
FAN09G4621 Fragaria x ananassa HOM05D001662 ORTHO05D007520 2.8e-18 95.1 42 88.1
CSS0043752 Camellia sinensis var. sinensis HOM05D001662 ORTHO05D007520 3.6e-18 94.7 39 92.3
PSO729G0020 Papaver somniferum HOM05D001662 ORTHO05D007520 1.8e-17 92.4 43 83.7
SEGI_36157 Sequoiadendron giganteum HOM05D001662 ORTHO05D007520 2.9e-15 85.1 51 66.7
Medtr7g005900 Medicago truncatula HOM05D001662 ORTHO05D007520 3.8e-15 84.7 35 97.1
BraA06t26618Z Brassica rapa HOM05D001662 ORTHO05D007520 3.2e-14 81.6 61 62.3
Carub.0005s0519 Capsella rubella HOM05D001662 ORTHO05D007520 9.2e-14 80.1 44 81.8
Cre13.g590900 Chlamydomonas reinhardtii HOM05D001662 ORTHO05D007520 1.1e-11 73.2 43 65.1
AT5G26640 Arabidopsis thaliana HOM05D001662 ORTHO05D007520 9.6e-11 70.1 32 84.4
Cfa026893 Carpinus fangiana HOM05D005041 ORTHO05D006003 1.8e-09 65.9 41 61.0
MCO02G295 Micromonas commoda HOM05D001662 ORTHO05D007520 5.8e-08 60.8 42 59.5
vmacro14356 Vaccinium macrocarpon HOM05D001662 ORTHO05D007520 1.9e-06 55.8 28 78.6
Glyma.10G142800 Glycine max HOM05D001662 ORTHO05D007520 3.2e-06 55.1 23 95.7
Glyma.13G265400 Glycine max HOM05D001662 ORTHO05D007520 3.2e-06 55.1 23 95.7
Glyma.20G091400 Glycine max HOM05D001662 ORTHO05D007520 3.2e-06 55.1 23 95.7
Phvul.005G076901 Phaseolus vulgaris HOM05D001662 ORTHO05D007520 3.2e-06 55.1 23 95.7
Phvul.007G205800 Phaseolus vulgaris HOM05D001662 ORTHO05D007520 3.2e-06 55.1 23 95.7
Carub.0003s0524 Capsella rubella HOM05D001662 ORTHO05D007520 9.3e-06 53.5 22 95.5
CARHR080330 Cardamine hirsuta HOM05D001662 ORTHO05D007520 9.3e-06 53.5 22 95.5
Lalb_Chr21g0310021 Lupinus albus HOM05D001662 ORTHO05D007520 9.3e-06 53.5 22 95.5
MD12G1199400 Malus domestica HOM05D001662 ORTHO05D007520 9.3e-06 53.5 22 95.5
Nn3g21965 Nelumbo nucifera HOM05D001662 ORTHO05D007520 9.3e-06 53.5 22 95.5
Peaxi162Scf00194g00020 Petunia axillaris HOM05D001662 ORTHO05D007520 9.3e-06 53.5 22 95.5
Potri.017G037701 Populus trichocarpa HOM05D001662 ORTHO05D007520 9.3e-06 53.5 22 95.5
Prupe.6G303800 Prunus persica HOM05D001662 ORTHO05D007520 9.3e-06 53.5 22 95.5
RcHm_v2.0_Chr3g0458621 Rosa chinensis HOM05D001662 ORTHO05D007520 9.3e-06 53.5 22 95.5
PGSC0003DMG400027099 Solanum tuberosum HOM05D001662 ORTHO05D007520 9.3e-06 53.5 22 95.5


User provided reference genes

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