Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv03836 Davidia involucrata HOM05D007208 ORTHO05D009090 8.8e-82 308.9 627 100.0
CSS0042005 Camellia sinensis var. sinensis HOM05D007208 ORTHO05D009090 9.8e-57 225.7 127 80.3
Lj8P115T34 Lonicera japonica HOM05D007208 ORTHO05D009090 1.1e-50 205.7 126 74.6
Actinidia09879 Actinidia chinensis HOM05D000006 ORTHO05D000001 2.6e-49 201.1 131 71.8
Rhsim06G0149200 Rhododendron simsii HOM05D007208 ORTHO05D009090 6.4e-48 196.4 127 73.2
Atru.chr6.3038 Acer truncatum HOM05D007208 ORTHO05D009090 5.6e-44 183.3 127 63.8
GSVIVG01030557001 Vitis vinifera HOM05D007208 ORTHO05D009090 7.3e-44 183.0 127 67.7
Prupe.3G234000 Prunus persica HOM05D007208 ORTHO05D009090 4.7e-43 180.3 126 66.7
RcHm_v2.0_Chr4g0446301 Rosa chinensis HOM05D007208 ORTHO05D009090 5.2e-42 176.8 125 65.6
Cc05_g06710 Coffea canephora HOM05D007208 ORTHO05D009090 9.9e-41 172.6 130 63.8
PGR042G3663 Punica granatum HOM05D007208 ORTHO05D009090 9.9e-41 172.6 126 61.1
QL10p048755 Quercus lobata HOM05D007208 ORTHO05D009090 9.9e-41 172.6 129 61.2
THA.LOC104826027 Tarenaya hassleriana HOM05D007208 ORTHO05D009090 1.7e-40 171.8 127 60.6
TAR629G2939 Trochodendron aralioides HOM05D007208 ORTHO05D009090 1.4e-39 168.7 125 63.2
Aa31LG1G20920 Aethionema arabicum HOM05D000389 ORTHO05D009090 1.9e-39 168.3 127 59.8
A10p02100 Brassica napus HOM05D007208 ORTHO05D009090 1.9e-39 168.3 129 60.5
AL1G13070 Arabidopsis lyrata HOM05D007208 ORTHO05D009090 4.1e-39 167.2 127 61.4
MD17G1080900 Malus domestica HOM05D007208 ORTHO05D009090 1.2e-38 165.6 123 61.8
BcaB02g06917 Brassica carinata HOM05D007208 ORTHO05D009090 1.6e-38 165.2 128 60.2
Cpa.g.sc34.123 Carica papaya HOM05D007208 ORTHO05D009090 2.1e-38 164.9 127 61.4
AT1G03560 Arabidopsis thaliana HOM05D007208 ORTHO05D009090 3.5e-38 164.1 127 59.8
BraA10t42479Z Brassica rapa HOM05D007208 ORTHO05D009090 3.5e-38 164.1 129 58.9
Haze_13114 Corylus avellana HOM05D007208 ORTHO05D009090 4.6e-38 163.7 126 61.9
Peaxi162Scf01258g00013 Petunia axillaris HOM05D007208 ORTHO05D009090 4.6e-38 163.7 130 60.8
Sp1g02490 Schrenkiella parvula HOM05D007208 ORTHO05D009090 4.6e-38 163.7 127 60.6
CAN.G168.33 Capsicum annuum HOM05D007208 ORTHO05D009090 7.8e-38 162.9 128 61.7
Thhalv10007014m.g Eutrema salsugineum HOM05D007208 ORTHO05D009090 7.8e-38 162.9 123 61.8
CiPaw.03G172500 Carya illinoinensis HOM05D007208 ORTHO05D009090 1.0e-37 162.5 127 59.1
FAN02G1502 Fragaria x ananassa HOM05D007208 ORTHO05D009090 1.7e-37 161.8 124 61.3
FAN05G4557 Fragaria x ananassa HOM05D007208 ORTHO05D009090 1.7e-37 161.8 124 61.3
BcaC05g24521 Brassica carinata HOM05D007208 ORTHO05D009090 3.0e-37 161.0 130 59.2
BolC5t28979H Brassica oleracea HOM05D007208 ORTHO05D009090 3.0e-37 161.0 130 59.2
C05p02010 Brassica napus HOM05D007208 ORTHO05D009090 3.9e-37 160.6 130 59.2
CARHR002920 Cardamine hirsuta HOM05D007208 ORTHO05D009090 3.9e-37 160.6 123 61.0
CsaV3_7G004270 Cucumis sativus L. HOM05D007208 ORTHO05D009090 3.9e-37 160.6 127 59.8
FvH4_6g45000 Fragaria vesca HOM05D007208 ORTHO05D009090 6.6e-37 159.8 128 60.2
Ciclev10014552m.g Citrus clementina HOM05D007208 ORTHO05D009090 8.6e-37 159.5 121 58.7
Manes.12G086900 Manihot esculenta HOM05D007208 ORTHO05D009090 8.6e-37 159.5 129 58.9
Manes.12G087100 Manihot esculenta HOM05D007208 ORTHO05D009090 1.1e-36 159.1 129 57.4
Potri.019G103400 Populus trichocarpa HOM05D007208 ORTHO05D009090 1.1e-36 159.1 131 56.5
Gohir.D02G181800 Gossypium hirsutum HOM05D007208 ORTHO05D009090 1.5e-36 158.7 128 60.2
Sopen10g004330 Solanum pennellii HOM05D007208 ORTHO05D009090 1.5e-36 158.7 115 65.2
PGSC0003DMG400021677 Solanum tuberosum HOM05D007208 ORTHO05D009090 1.9e-36 158.3 115 65.2
Solyc10g008510.3 Solanum lycopersicum HOM05D007208 ORTHO05D009090 2.5e-36 157.9 115 65.2
ClCG02G001180 Citrullus lanatus HOM05D007208 ORTHO05D009090 3.3e-36 157.5 127 59.8
Thecc.05G160800 Theobroma cacao HOM05D007208 ORTHO05D009090 7.3e-36 156.4 128 59.4
CANSAT35G0587 Cannabis sativa HOM05D007208 ORTHO05D009090 2.1e-35 154.8 128 57.0
Nn1g06681 Nelumbo nucifera HOM05D007208 ORTHO05D009090 4.7e-35 153.7 123 56.9
TWI75G0324 Tripterygium wilfordii HOM05D007208 ORTHO05D009090 1.8e-34 151.8 125 56.8
Ah.01g002470 Amaranthus hybridus HOM05D007208 ORTHO05D009090 8.9e-34 149.4 125 56.8
Hma1.2p1_0875F.1_g231460 Hydrangea macrophylla HOM05D007208 ORTHO05D009090 8.9e-34 149.4 91 76.9
Hma1.2p1_0875F.1_g231470 Hydrangea macrophylla HOM05D007208 ORTHO05D009090 8.9e-34 149.4 91 76.9
Thecc.02G175200 Theobroma cacao HOM05D007208 ORTHO05D009090 4.4e-33 147.1 128 57.0
Sed0017509 Sechium edule HOM05D007208 ORTHO05D009090 9.9e-33 146.0 122 57.4
COL.COLO4_35409 Corchorus olitorius HOM05D007208 ORTHO05D009090 1.7e-32 145.2 128 54.7
Lsat_1_v5_gn_8_132240 Lactuca sativa HOM05D007208 ORTHO05D009090 8.4e-32 142.9 132 56.1
FAN09G1518 Fragaria x ananassa HOM05D007208 ORTHO05D009090 4.2e-31 140.6 124 56.5
EL10Ac9g22658 Beta vulgaris HOM05D007208 ORTHO05D009090 9.3e-31 139.4 126 53.2
HanXRQChr15g0492931 Helianthus annuus HOM05D007208 ORTHO05D009090 2.3e-29 134.8 133 51.1
HanXRQChr17g0557691 Helianthus annuus HOM05D007208 ORTHO05D009090 3.9e-29 134.0 133 51.1
ECA233G0015 Erigeron canadensis HOM05D007208 ORTHO05D009090 3.3e-28 131.0 134 53.0
MBI18_g13208_MAGBIO Magnolia biondii HOM05D007208 ORTHO05D009090 3.3e-28 131.0 127 52.0
Aqoxy1G02638 Aquilegia oxysepala HOM05D007208 ORTHO05D009090 4.3e-28 130.6 120 50.0
SGA_v2.0_scaffold261G45922 Striga asiatica HOM05D007208 ORTHO05D009090 2.1e-27 128.3 124 50.0
Sc21g0002370 Simmondsia chinensis HOM05D007208 ORTHO05D009090 6.2e-27 126.7 127 48.0
TPR.G16118 Trifolium pratense HOM05D007208 ORTHO05D009090 2.6e-25 121.3 109 56.0
ATR0626G143 Amborella trichopoda HOM05D007208 ORTHO05D009090 1.3e-24 119.0 143 38.5
Medtr8g054410 Medicago truncatula HOM05D007208 ORTHO05D009090 1.7e-24 118.6 109 54.1
Nitab4.5_0000998g0040 Nicotiana tabacum HOM05D007208 ORTHO05D009090 4.9e-24 117.1 80 66.2
Psat4g156960 Pisum sativum HOM05D007208 ORTHO05D009090 6.4e-24 116.7 108 54.6
Nitab4.5_0000635g0090 Nicotiana tabacum HOM05D007208 ORTHO05D009090 3.2e-23 114.4 80 63.8
Ca_27341_v3 Cicer arietinum L. HOM05D007208 ORTHO05D009090 5.4e-23 113.6 105 53.3
Ca_30865_v3 Cicer arietinum L. HOM05D007208 ORTHO05D009090 5.4e-23 113.6 105 53.3
Lalb_Chr03g0031321 Lupinus albus HOM05D007208 ORTHO05D009090 2.1e-22 111.7 126 47.6
Hund14539 Selenicereus undatus HOM05D007208 ORTHO05D009090 2.1e-22 111.7 125 45.6
Sabra19G0114200 Salix brachista HOM05D007208 ORTHO05D009090 7.9e-22 109.8 128 46.1
PSO675G0351 Papaver somniferum HOM05D007208 ORTHO05D009090 1.5e-20 105.5 124 44.4
Carub.0001s0270 Capsella rubella HOM05D007208 ORTHO05D009090 1.9e-20 105.1 79 60.8
DCAR_021232 Daucus carota HOM05D007208 ORTHO05D009090 4.3e-20 104.0 79 62.0
SHI10482 Sapria himalayana HOM05D007208 ORTHO05D009090 5.6e-20 103.6 123 43.1
PSO541G2896 Papaver somniferum HOM05D007208 ORTHO05D009090 7.4e-20 103.2 124 43.5
arahy.Tifrunner.gnm1.ann1.LJ4E0Z Arachis hypogaea HOM05D007208 ORTHO05D009090 9.6e-20 102.8 113 49.6
Eucgr.A01782 Eucalyptus grandis HOM05D007208 ORTHO05D009090 9.6e-20 102.8 79 60.8
Phvul.011G168600 Phaseolus vulgaris HOM05D007208 ORTHO05D009090 9.6e-20 102.8 113 47.8
arahy.Tifrunner.gnm1.ann1.KEA2PN Arachis hypogaea HOM05D007208 ORTHO05D009090 1.3e-19 102.4 113 48.7
VMungo1127G1221 Vigna mungo HOM05D007208 ORTHO05D009090 4.8e-19 100.5 115 48.7
Lj3g0013344 Lotus japonicus HOM05D007208 ORTHO05D009090 1.1e-18 99.4 111 52.3
arahy.Tifrunner.gnm1.ann1.B872W9 Arachis hypogaea HOM05D007208 ORTHO05D009090 1.8e-18 98.6 113 46.0
Glyma.10G265500 Glycine max HOM05D007208 ORTHO05D009090 4.0e-18 97.4 129 45.7
Oeu041287.1 Olea europaea HOM05D007208 ORTHO05D009090 9.9e-17 92.8 121 43.0
HPP92_009506 Vanilla planifolia HOM05D007208 ORTHO05D009090 1.7e-16 92.0 108 39.8
arahy.Tifrunner.gnm1.ann1.55T2PK Arachis hypogaea HOM05D007208 ORTHO05D009090 2.9e-16 91.3 113 44.2
SalBow1G0905 Salvia bowleyana HOM05D007208 ORTHO05D009090 3.2e-15 87.8 92 46.7
Gohir.A03G158600 Gossypium hirsutum HOM05D007208 ORTHO05D009090 4.2e-15 87.4 65 92.3
RcHm_v2.0_Chr2g0162271 Rosa chinensis HOM05D007208 ORTHO05D009090 5.5e-15 87.0 92 67.4
MELO3C018751.2 Cucumis melo HOM05D007208 ORTHO05D009090 7.1e-15 86.7 65 67.7
Migut.H01048 Erythranthe guttata HOM05D007208 ORTHO05D009090 3.5e-14 84.3 63 88.9
FAN14G2434 Fragaria x ananassa HOM05D007208 ORTHO05D009090 4.6e-14 84.0 68 61.8
Duzib248G0625 Durio zibethinus HOM05D007208 ORTHO05D009090 7.9e-14 83.2 63 90.5
SEGI_00392 Sequoiadendron giganteum HOM05D007208 ORTHO05D009090 3.0e-13 81.3 99 38.4
Gorai.005G204300 Gossypium raimondii HOM05D007208 ORTHO05D009090 3.9e-13 80.9 63 90.5
Zm00001eb069300 Zea mays HOM05D007208 ORTHO05D009090 1.5e-12 79.0 64 64.1
CDE05G2253 Ceratophyllum demersum HOM05D007208 ORTHO05D009090 3.7e-11 74.3 61 85.2
AUR62014989 Chenopodium quinoa HOM05D007208 ORTHO05D009090 6.9e-10 70.1 46 63.0
arahy.Tifrunner.gnm1.ann1.VA1KA7 Arachis hypogaea HOM05D007208 ORTHO05D009090 2.0e-09 68.6 65 58.5
CDE05G0255 Ceratophyllum demersum HOM05D007208 ORTHO05D009090 8.4e-08 63.2 51 64.7
AL6G16490 Arabidopsis lyrata HOM05D006596 ORTHO05D008497 7.9e-06 56.6 92 32.6


User provided reference genes

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