Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv03816 Davidia involucrata HOM05D031496 ORTHO05D029219 1.4e-119 433.0 216 100.0
Dinv24111 Davidia involucrata HOM05D031496 ORTHO05D029219 3.4e-25 119.4 106 66.0
Dinv15325 Davidia involucrata HOM05D031496 ORTHO05D029219 1.0e-21 107.8 116 56.0
Dinv42431 Davidia involucrata HOM05D005276 ORTHO05D006813 4.8e-19 99.0 57 82.5
Dinv15323 Davidia involucrata HOM05D031496 ORTHO05D029219 1.8e-18 97.1 116 51.7
vmacro22834 Vaccinium macrocarpon HOM05D005276 ORTHO05D006813 1.3e-11 74.3 59 55.9
Hma1.2p1_0370F.1_g137770 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 2.1e-11 73.6 59 55.9
Hma1.2p1_2291F.1_g319080 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 2.1e-11 73.6 59 55.9
RcHm_v2.0_Chr5g0076491 Rosa chinensis HOM05D005276 ORTHO05D006813 8.2e-11 71.6 57 56.1
Psat5g117800 Pisum sativum HOM05D005276 ORTHO05D006813 1.1e-10 71.2 59 54.2
Psat5g117840 Pisum sativum HOM05D005276 ORTHO05D006813 1.1e-10 71.2 59 54.2
AUR62016935 Chenopodium quinoa HOM05D005276 ORTHO05D006813 2.4e-10 70.1 64 46.9
Rhsim08G0006900 Rhododendron simsii HOM05D005276 ORTHO05D006813 2.4e-10 70.1 59 52.5
Rhsim05G0142600 Rhododendron simsii HOM05D005276 ORTHO05D006813 6.9e-10 68.6 59 54.2
RcHm_v2.0_Chr5g0076681 Rosa chinensis HOM05D005276 ORTHO05D006813 6.9e-10 68.6 57 52.6
Rhsim04G0116800 Rhododendron simsii HOM05D005276 ORTHO05D006813 1.2e-09 67.8 59 50.8
Hma1.2p1_0052F.1_g030780 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 1.5e-09 67.4 59 50.8
Hma1.2p1_0472F.1_g160005 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 1.5e-09 67.4 59 50.8
Hma1.2p1_0472F.1_g160020 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 1.5e-09 67.4 59 50.8
Actinidia07622 Actinidia chinensis HOM05D005276 ORTHO05D006813 2.6e-09 66.6 59 50.8
PGR102G2116 Punica granatum HOM05D005276 ORTHO05D006813 7.6e-09 65.1 56 55.4
Rhsim05G0197900 Rhododendron simsii HOM05D005276 ORTHO05D006813 1.3e-08 64.3 60 50.0
Rhsim04G0073100 Rhododendron simsii HOM05D005276 ORTHO05D006813 1.7e-08 63.9 59 47.5
Phvul.007G276200 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 2.9e-08 63.2 57 47.4
PGR031G1219 Punica granatum HOM05D005276 ORTHO05D006813 5.0e-08 62.4 49 61.2
Phvul.007G275600 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 8.5e-08 61.6 57 43.9
Rhsim05G0197600 Rhododendron simsii HOM05D005276 ORTHO05D006813 1.4e-07 60.8 62 46.8
VMungo0720G1899 Vigna mungo HOM05D005276 ORTHO05D006813 1.4e-07 60.8 57 43.9
TWI23G0671 Tripterygium wilfordii HOM05D005276 ORTHO05D006813 2.5e-07 60.1 53 50.9
Hma1.2p1_0052F.1_g030770 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 4.2e-07 59.3 59 49.2
Hma1.2p1_0472F.1_g160029 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 4.2e-07 59.3 59 49.2
RcHm_v2.0_Chr5g0076801 Rosa chinensis HOM05D005276 ORTHO05D006813 4.2e-07 59.3 57 47.4
Ca_08210_v3 Cicer arietinum L. HOM05D005276 ORTHO05D006813 5.5e-07 58.9 56 48.2
Lj6C426G9 Lonicera japonica HOM05D005276 ORTHO05D006813 5.5e-07 58.9 56 46.4
Phvul.002G269700 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 5.5e-07 58.9 57 43.9
Phvul.007G276500 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 5.5e-07 58.9 57 43.9
Ca_23693_v3 Cicer arietinum L. HOM05D005276 ORTHO05D006813 7.2e-07 58.5 59 45.8
Psat0s876g0040 Pisum sativum HOM05D005276 ORTHO05D006813 7.2e-07 58.5 57 49.1
Psat0s876g0120 Pisum sativum HOM05D005276 ORTHO05D006813 7.2e-07 58.5 57 49.1
VMungo0720G2700 Vigna mungo HOM05D005276 ORTHO05D006813 7.2e-07 58.5 54 48.1
VMungo0720G3131 Vigna mungo HOM05D005276 ORTHO05D006813 7.2e-07 58.5 57 43.9
Dinv03278 Davidia involucrata HOM05D008473 ORTHO05D000921 9.3e-07 58.2 65 49.2
Phvul.007G263500 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 9.3e-07 58.2 57 47.4
Phvul.007G276700 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 9.3e-07 58.2 57 43.9
Potri.017G120900 Populus trichocarpa HOM05D003171 ORTHO05D000921 1.2e-06 57.8 67 41.8
AUR62014758 Chenopodium quinoa HOM05D005276 ORTHO05D006813 1.6e-06 57.4 51 51.0
Phvul.007G276401 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.6e-06 57.4 57 43.9
Phvul.008G252000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 2.1e-06 57.0 57 40.4
CANSAT54G2744 Cannabis sativa HOM05D003171 ORTHO05D000921 2.7e-06 56.6 54 44.4
Medtr0695s0030 Medicago truncatula HOM05D005276 ORTHO05D006813 2.7e-06 56.6 49 53.1
Medtr8g038070 Medicago truncatula HOM05D005276 ORTHO05D006813 2.7e-06 56.6 49 53.1
Medtr8g038100 Medicago truncatula HOM05D005276 ORTHO05D006813 2.7e-06 56.6 49 53.1
PGR102G1815 Punica granatum HOM05D005276 ORTHO05D006813 3.6e-06 56.2 56 48.2
PGR102G3141 Punica granatum HOM05D005276 ORTHO05D006813 3.6e-06 56.2 56 48.2
Sabra17G0100000 Salix brachista HOM05D003171 ORTHO05D000921 3.6e-06 56.2 84 38.1
Sabra17G0103300 Salix brachista HOM05D003171 ORTHO05D000921 3.6e-06 56.2 84 38.1
VMungo0720G1439 Vigna mungo HOM05D005276 ORTHO05D006813 3.6e-06 56.2 57 42.1
Lj3g0023477 Lotus japonicus HOM05D005276 ORTHO05D006813 4.6e-06 55.8 66 43.9
Medtr0057s0100 Medicago truncatula HOM05D005276 ORTHO05D006813 4.6e-06 55.8 59 42.4
Phvul.007G276000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 4.6e-06 55.8 57 42.1
Hma1.2p1_0472F.1_g159990 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 6.1e-06 55.5 39 56.4
Medtr0057s0170 Medicago truncatula HOM05D005276 ORTHO05D006813 6.1e-06 55.5 59 42.4
Phvul.007G275900 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 6.1e-06 55.5 57 38.6
QL02p010900 Quercus lobata HOM05D003171 ORTHO05D000921 6.1e-06 55.5 77 36.4
TPR.G32241 Trifolium pratense HOM05D000984 ORTHO05D000921 6.1e-06 55.5 72 41.7
Ca_18689_v3 Cicer arietinum L. HOM05D011725 ORTHO05D000921 7.9e-06 55.1 63 41.3
RcHm_v2.0_Chr5g0076401 Rosa chinensis HOM05D005276 ORTHO05D006813 7.9e-06 55.1 57 45.6
TPR.G33522 Trifolium pratense HOM05D005276 ORTHO05D006813 7.9e-06 55.1 59 44.1


User provided reference genes

Program Settings