Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv03812 Davidia involucrata HOM05D006565 ORTHO05D008717 5.6e-239 830.5 406 100.0
Actinidia34736 Actinidia chinensis HOM05D006565 ORTHO05D008717 7.8e-148 527.7 352 77.6
TAR636G0179 Trochodendron aralioides HOM05D006565 ORTHO05D008717 1.4e-141 506.9 354 74.0
vmacro10331 Vaccinium macrocarpon HOM05D006565 ORTHO05D008717 3.0e-139 499.2 361 73.4
Rhsim09G0140500 Rhododendron simsii HOM05D006565 ORTHO05D008717 3.1e-136 489.2 363 71.6
HanXRQChr08g0217341 Helianthus annuus HOM05D006565 ORTHO05D008717 8.7e-131 471.1 340 70.0
Solyc11g006420.2 Solanum lycopersicum HOM05D006565 ORTHO05D008717 7.4e-130 468.0 354 67.2
Prupe.2G073700 Prunus persica HOM05D006565 ORTHO05D008717 1.3e-129 467.2 347 69.5
RhsimUnG0215000 Rhododendron simsii HOM05D006565 ORTHO05D008717 3.1e-128 462.6 422 62.1
ClCG05G021990 Citrullus lanatus HOM05D006565 ORTHO05D008717 9.0e-128 461.1 352 68.8
QL04p048612 Quercus lobata HOM05D006565 ORTHO05D008717 2.0e-127 459.9 353 69.4
GSVIVG01034599001 Vitis vinifera HOM05D006565 ORTHO05D008717 2.6e-127 459.5 325 71.1
CiPaw.14G036000 Carya illinoinensis HOM05D006565 ORTHO05D008717 3.4e-127 459.1 346 68.8
PSO339G2240 Papaver somniferum HOM05D006565 ORTHO05D008717 3.4e-127 459.1 360 64.2
MSTRG.9025 Avicennia marina HOM05D006565 ORTHO05D008717 4.5e-127 458.8 361 64.3
Migut.F00832 Erythranthe guttata HOM05D006565 ORTHO05D008717 7.6e-127 458.0 316 72.2
Nn2g14368 Nelumbo nucifera HOM05D006565 ORTHO05D008717 1.3e-126 457.2 351 66.4
MELO3C012330.2 Cucumis melo HOM05D006565 ORTHO05D008717 1.7e-126 456.8 347 68.0
RcHm_v2.0_Chr1g0332191 Rosa chinensis HOM05D006565 ORTHO05D008717 3.8e-126 455.7 336 68.8
CAN.G143.52 Capsicum annuum HOM05D006565 ORTHO05D008717 6.4e-126 454.9 327 70.0
Lj3A921T38 Lonicera japonica HOM05D006565 ORTHO05D008717 2.4e-125 453.0 274 81.8
Thecc.10G119100 Theobroma cacao HOM05D006565 ORTHO05D008717 3.2e-125 452.6 320 70.0
Dinv06042 Davidia involucrata HOM05D006565 ORTHO05D008717 4.2e-125 452.2 279 82.8
CsaV3_5G035170 Cucumis sativus L. HOM05D006565 ORTHO05D008717 7.1e-125 451.4 350 67.1
Sopen11g002320 Solanum pennellii HOM05D006565 ORTHO05D008717 1.2e-124 450.7 309 71.5
Cc02_g09290 Coffea canephora HOM05D006565 ORTHO05D008717 1.6e-124 450.3 292 75.0
Glyma.20G195000 Glycine max HOM05D006565 ORTHO05D008717 1.6e-124 450.3 321 68.5
Lj5g0019410 Lotus japonicus HOM05D006565 ORTHO05D008717 2.1e-124 449.9 334 68.9
Lalb_Chr06g0169851 Lupinus albus HOM05D006565 ORTHO05D008717 3.5e-124 449.1 349 65.0
Aqoxy1G00616 Aquilegia oxysepala HOM05D006565 ORTHO05D008717 6.0e-124 448.4 297 75.8
ECA233G2794 Erigeron canadensis HOM05D006565 ORTHO05D008717 6.0e-124 448.4 310 71.9
SGA_v2.0_scaffold90G27708 Striga asiatica HOM05D006565 ORTHO05D008717 1.3e-123 447.2 342 68.4
Atru.chr12.1084 Acer truncatum HOM05D006565 ORTHO05D008717 1.8e-123 446.8 351 65.8
arahy.Tifrunner.gnm1.ann1.51BCJ8 Arachis hypogaea HOM05D006565 ORTHO05D008717 8.7e-123 444.5 297 73.7
Ciclev10015763m.g Citrus clementina HOM05D006565 ORTHO05D008717 8.7e-123 444.5 339 66.4
arahy.Tifrunner.gnm1.ann1.V0HLME Arachis hypogaea HOM05D006565 ORTHO05D008717 1.5e-122 443.7 297 73.4
Manes.10G059200 Manihot esculenta HOM05D006565 ORTHO05D008717 2.5e-122 443.0 355 65.6
Lsat_1_v5_gn_8_21800 Lactuca sativa HOM05D006565 ORTHO05D008717 3.3e-122 442.6 333 68.5
MD07G1062700 Malus domestica HOM05D006565 ORTHO05D008717 4.3e-122 442.2 344 66.0
Ca_10426_v3 Cicer arietinum L. HOM05D006565 ORTHO05D008717 5.6e-122 441.8 350 64.6
Sed0004638 Sechium edule HOM05D006565 ORTHO05D008717 7.4e-122 441.4 343 66.2
TWI15G0448 Tripterygium wilfordii HOM05D006565 ORTHO05D008717 2.8e-121 439.5 354 64.7
Peaxi162Scf00120g01317 Petunia axillaris HOM05D006565 ORTHO05D008717 3.7e-121 439.1 344 65.1
Potri.010G243900 Populus trichocarpa HOM05D006565 ORTHO05D008717 3.7e-121 439.1 325 68.3
Sc07g0003130 Simmondsia chinensis HOM05D006565 ORTHO05D008717 4.8e-121 438.7 351 65.2
HanXRQChr02g0049321 Helianthus annuus HOM05D006565 ORTHO05D008717 8.2e-121 438.0 307 70.7
Eucgr.G02667 Eucalyptus grandis HOM05D006565 ORTHO05D008717 1.1e-120 437.6 293 73.4
PGSC0003DMG400014108 Solanum tuberosum HOM05D006565 ORTHO05D008717 1.1e-120 437.6 309 69.6
Gohir.D05G287300 Gossypium hirsutum HOM05D006565 ORTHO05D008717 1.8e-120 436.8 355 63.4
VMungo0720G0186 Vigna mungo HOM05D006565 ORTHO05D008717 1.8e-120 436.8 318 67.9
Gorai.009G302300 Gossypium raimondii HOM05D006565 ORTHO05D008717 2.4e-120 436.4 355 63.4
FvH4_7g05460 Fragaria vesca HOM05D006565 ORTHO05D008717 6.9e-120 434.9 288 73.3
Gohir.A05G286300 Gossypium hirsutum HOM05D006565 ORTHO05D008717 6.9e-120 434.9 355 63.1
Duzib114G0050 Durio zibethinus HOM05D006565 ORTHO05D008717 2.6e-119 433.0 292 72.3
TPR.G10259 Trifolium pratense HOM05D006565 ORTHO05D008717 2.9e-118 429.5 293 71.0
Medtr1g090380 Medicago truncatula HOM05D006565 ORTHO05D008717 3.8e-118 429.1 290 72.8
ATR0697G221 Amborella trichopoda HOM05D006565 ORTHO05D008717 4.2e-117 425.6 318 65.4
CANSAT56G1291 Cannabis sativa HOM05D006565 ORTHO05D008717 2.1e-116 423.3 312 68.9
Os03g0648900 Oryza sativa ssp. japonica HOM05D006565 ORTHO05D008717 7.9e-116 421.4 286 72.4
Nitab4.5_0001781g0210 Nicotiana tabacum HOM05D006565 ORTHO05D008717 3.0e-115 419.5 283 74.2
HPP92_013938 Vanilla planifolia HOM05D006565 ORTHO05D008717 3.0e-115 419.5 352 61.9
COL.COLO4_10008 Corchorus olitorius HOM05D006565 ORTHO05D008717 3.7e-113 412.5 293 70.6
Zm00001eb218510 Zea mays HOM05D006565 ORTHO05D008717 6.3e-113 411.8 321 63.9
Carub.0004s2066 Capsella rubella HOM05D006565 ORTHO05D008717 1.4e-112 410.6 314 65.9
Psat6g171600 Pisum sativum HOM05D006565 ORTHO05D008717 1.4e-112 410.6 292 68.5
CARHR133350 Cardamine hirsuta HOM05D006565 ORTHO05D008717 1.8e-112 410.2 296 68.2
A03p21520 Brassica napus HOM05D006565 ORTHO05D008717 4.1e-112 409.1 325 62.8
AUR62034160 Chenopodium quinoa HOM05D006565 ORTHO05D008717 4.1e-112 409.1 294 66.7
Sabra10G0190700 Salix brachista HOM05D006565 ORTHO05D008717 4.1e-112 409.1 335 62.4
Phvul.007G137100 Phaseolus vulgaris HOM05D006565 ORTHO05D008717 6.9e-112 408.3 313 65.5
EL10Ac4g08734 Beta vulgaris HOM05D006565 ORTHO05D008717 9.0e-112 407.9 290 68.3
Sp4g21020 Schrenkiella parvula HOM05D006565 ORTHO05D008717 1.5e-111 407.1 314 65.9
AUR62014278 Chenopodium quinoa HOM05D006565 ORTHO05D008717 3.4e-111 406.0 294 66.7
Oeu009252.1 Olea europaea HOM05D006565 ORTHO05D008717 3.8e-110 402.5 319 67.7
THA.LOC104801973 Tarenaya hassleriana HOM05D006565 ORTHO05D008717 1.1e-109 401.0 297 67.7
AT2G38680 Arabidopsis thaliana HOM05D006565 ORTHO05D008717 3.2e-109 399.4 295 67.1
Hund06810 Selenicereus undatus HOM05D006565 ORTHO05D008717 3.2e-109 399.4 354 61.0
Thhalv10016992m.g Eutrema salsugineum HOM05D006565 ORTHO05D008717 1.2e-108 397.5 293 67.6
BraA03t11388Z Brassica rapa HOM05D006565 ORTHO05D008717 1.7e-105 387.1 307 63.5
BolC3t14938H Brassica oleracea HOM05D006565 ORTHO05D008717 6.3e-105 385.2 313 61.0
C03p25510 Brassica napus HOM05D006565 ORTHO05D008717 1.2e-103 380.9 289 65.1
CDE06G1733 Ceratophyllum demersum HOM05D006565 ORTHO05D008717 2.2e-102 376.7 271 69.7
Pp3c1_24570 Physcomitrium patens HOM05D006565 ORTHO05D008717 2.3e-99 366.7 288 61.8
FAN01G3085 Fragaria x ananassa HOM05D006565 ORTHO05D008717 6.7e-99 365.2 283 66.1
SEGI_36612 Sequoiadendron giganteum HOM05D006565 ORTHO05D008717 2.6e-98 363.2 268 67.2
AagrBONN_evm.TU.Sc2ySwM_228.2835 Anthoceros agrestis HOM05D006565 ORTHO05D008717 7.4e-98 361.7 292 61.0
FAN06G1903 Fragaria x ananassa HOM05D006565 ORTHO05D008717 3.1e-96 356.3 275 66.5
SMO367G1082 Selaginella moellendorffii HOM05D006565 ORTHO05D008717 4.1e-96 355.9 290 59.0
Prupe.2G074100 Prunus persica HOM05D006565 ORTHO05D008717 5.5e-93 345.5 217 77.0
FAN10G4168 Fragaria x ananassa HOM05D006565 ORTHO05D008717 1.8e-91 340.5 300 60.7
AL4G35960 Arabidopsis lyrata HOM05D006565 ORTHO05D008717 7.7e-87 325.1 293 58.0
Mapoly0082s0075 Marchantia polymorpha HOM05D006565 ORTHO05D008717 1.3e-86 324.3 266 57.1
FAN21G0259 Fragaria x ananassa HOM05D006565 ORTHO05D008717 3.2e-85 319.7 271 61.6
PGSC0003DMG400001988 Solanum tuberosum HOM05D006565 ORTHO05D008717 1.6e-84 317.4 208 73.1
Nitab4.5_0016854g0010 Nicotiana tabacum HOM05D006565 ORTHO05D008717 4.1e-80 302.8 213 71.8
FvH4_1g27810 Fragaria vesca HOM05D006565 ORTHO05D008717 1.0e-75 288.1 253 61.7
CBR_g36829 Chara braunii HOM05D006565 ORTHO05D001468 1.1e-72 278.1 398 40.2
Lj3A922G54 Lonicera japonica HOM05D006565 ORTHO05D008717 1.3e-65 254.6 172 75.6
Haze_03436 Corylus avellana HOM05D006565 ORTHO05D008717 3.3e-61 240.0 312 48.1
MBI05_g36782_MAGBIO Magnolia biondii HOM05D006565 ORTHO05D008717 4.3e-61 239.6 159 74.8
PSO384G3661 Papaver somniferum HOM05D006565 ORTHO05D008717 5.4e-56 222.6 195 58.5
Sabra13G0091500 Salix brachista HOM05D006565 ORTHO05D008717 1.1e-53 214.9 176 61.9
Potri.008G015201 Populus trichocarpa HOM05D006565 ORTHO05D008717 8.0e-52 208.8 142 71.1
FAN10G3234 Fragaria x ananassa HOM05D006565 ORTHO05D008717 1.2e-42 178.3 255 44.3
Hma1.2p1_0098F.1_g048200 Hydrangea macrophylla HOM05D006565 ORTHO05D008717 2.6e-42 177.2 108 79.6
Glyma.10G195001 Glycine max HOM05D006565 ORTHO05D008717 1.5e-37 161.4 107 68.2
FAN03G2487 Fragaria x ananassa HOM05D006565 ORTHO05D008717 1.2e-36 158.3 185 50.8
FAN10G0629 Fragaria x ananassa HOM05D006565 ORTHO05D008717 1.6e-36 157.9 185 50.8
Lj3A922G55 Lonicera japonica HOM05D006565 ORTHO05D008717 5.8e-34 149.4 89 80.9
Cpa.g.sc33.128 Carica papaya HOM05D006565 ORTHO05D008717 1.0e-30 138.7 82 80.5
Cpa.g.sc33.129 Carica papaya HOM05D006565 ORTHO05D008717 1.1e-27 128.6 93 66.7
CSS0040424 Camellia sinensis var. sinensis HOM05D006565 ORTHO05D008717 1.9e-24 117.9 66 81.8
CSS0049814 Camellia sinensis var. sinensis HOM05D006565 ORTHO05D008717 2.8e-20 104.0 60 85.0
RhsimUnG0214900 Rhododendron simsii HOM05D006565 ORTHO05D008717 2.4e-19 100.9 81 66.7
Aqoxy6G01578 Aquilegia oxysepala HOM05D006565 ORTHO05D008717 4.0e-19 100.1 144 45.8
MBI15_g31580_MAGBIO Magnolia biondii HOM05D001433 ORTHO05D011977 1.3e-14 85.1 60 70.0
MBI08_g05402_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 3.9e-14 83.6 56 73.2
Aqoxy6G01581 Aquilegia oxysepala HOM05D006565 ORTHO05D000596 4.5e-10 70.1 41 80.5
MBI17_g02193_MAGBIO Magnolia biondii HOM05D006565 ORTHO05D011977 4.9e-09 66.6 44 75.0
MBI05_g33289_MAGBIO Magnolia biondii HOM05D006565 ORTHO05D008717 1.1e-08 65.5 42 76.2
Psat7g239080 Pisum sativum HOM05D005767 ORTHO05D006785 4.2e-08 63.5 81 43.2
MBI06_g14037_MAGBIO Magnolia biondii HOM05D001433 ORTHO05D011977 3.0e-06 57.4 42 66.7
COL.COLO4_26864 Corchorus olitorius HOM05D002341 ORTHO05D003165 8.7e-06 55.8 34 73.5


User provided reference genes

Program Settings