Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv03784 Davidia involucrata HOM05D006063 ORTHO05D000023 1.1e-240 836.3 449 100.0
CSS0004581 Camellia sinensis var. sinensis HOM05D006063 ORTHO05D000023 9.3e-134 481.1 488 54.9
Hma1.2p1_0153F.1_g067880 Hydrangea macrophylla HOM05D006063 ORTHO05D000023 2.2e-114 416.8 424 57.1
Rhsim09G0137100 Rhododendron simsii HOM05D006063 ORTHO05D000023 1.8e-113 413.7 485 52.2
vmacro10365 Vaccinium macrocarpon HOM05D006063 ORTHO05D000023 1.8e-113 413.7 444 53.2
Actinidia34754 Actinidia chinensis HOM05D006063 ORTHO05D000023 1.7e-111 407.1 431 55.0
TAR362G1155 Trochodendron aralioides HOM05D006063 ORTHO05D000023 1.1e-110 404.4 459 50.8
Aqoxy2G04022 Aquilegia oxysepala HOM05D006063 ORTHO05D000023 1.1e-97 361.3 460 47.0
CANSAT54G1152 Cannabis sativa HOM05D006063 ORTHO05D000023 1.9e-94 350.5 444 46.4
Sc16g0010060 Simmondsia chinensis HOM05D006063 ORTHO05D000023 1.4e-92 344.4 442 46.6
MELO3C010119.2 Cucumis melo HOM05D006063 ORTHO05D000023 3.9e-92 342.8 451 47.0
ClCG03G011330 Citrullus lanatus HOM05D006063 ORTHO05D000023 2.6e-91 340.1 454 45.6
Prupe.6G355400 Prunus persica HOM05D006063 ORTHO05D000023 7.4e-91 338.6 451 45.0
Cc09_g03150 Coffea canephora HOM05D006063 ORTHO05D000023 4.1e-89 332.8 447 43.2
Hund07147 Selenicereus undatus HOM05D006063 ORTHO05D000023 9.1e-89 331.6 444 44.4
EL10Ac4g09796 Beta vulgaris HOM05D006063 ORTHO05D000023 2.6e-88 330.1 443 44.5
Lj2A50T27 Lonicera japonica HOM05D006063 ORTHO05D000023 3.5e-88 329.7 348 53.2
Nitab4.5_0000504g0070 Nicotiana tabacum HOM05D006063 ORTHO05D000023 1.1e-86 324.7 448 45.5
Ciclev10019009m.g Citrus clementina HOM05D006063 ORTHO05D000023 1.9e-86 323.9 464 44.4
PSO017G2613 Papaver somniferum HOM05D006063 ORTHO05D000023 3.2e-86 323.2 453 41.7
Lsat_1_v5_gn_9_46040 Lactuca sativa HOM05D006063 ORTHO05D000023 5.5e-86 322.4 442 43.7
PGSC0003DMG400015112 Solanum tuberosum HOM05D006063 ORTHO05D000023 5.5e-86 322.4 451 44.6
PSO063G1700 Papaver somniferum HOM05D006063 ORTHO05D000023 9.4e-86 321.6 452 41.8
CAN.G4.18 Capsicum annuum HOM05D006063 ORTHO05D000023 2.1e-85 320.5 443 42.9
CsaV3_1G044890 Cucumis sativus L. HOM05D006063 ORTHO05D000023 2.1e-85 320.5 448 44.9
FvH4_6g01260 Fragaria vesca HOM05D006063 ORTHO05D000023 2.1e-85 320.5 444 44.1
Solyc04g050760.4 Solanum lycopersicum HOM05D006063 ORTHO05D000023 8.0e-85 318.5 450 43.8
Sopen04g021710 Solanum pennellii HOM05D006063 ORTHO05D000023 1.4e-84 317.8 450 43.8
MD04G1235500 Malus domestica HOM05D006063 ORTHO05D000023 2.3e-84 317.0 453 42.6
Cpa.g.sc51.61 Carica papaya HOM05D006063 ORTHO05D000023 9.7e-83 311.6 463 41.9
FAN05G0856 Fragaria x ananassa HOM05D006063 ORTHO05D000023 2.2e-82 310.5 448 43.3
TWI34G0066 Tripterygium wilfordii HOM05D006063 ORTHO05D000023 2.2e-82 310.5 458 42.6
Sed0026121 Sechium edule HOM05D006063 ORTHO05D000023 2.8e-82 310.1 442 43.0
Thecc.05G261400 Theobroma cacao HOM05D006063 ORTHO05D000023 4.8e-82 309.3 451 44.6
MSTRG.9222 Avicennia marina HOM05D006063 ORTHO05D000023 6.3e-82 308.9 452 40.5
FAN02G3689 Fragaria x ananassa HOM05D006063 ORTHO05D000023 1.1e-81 308.1 447 43.2
FAN09G4822 Fragaria x ananassa HOM05D006063 ORTHO05D000023 2.4e-81 307.0 447 43.4
Sabra19G0039200 Salix brachista HOM05D006063 ORTHO05D000023 3.1e-81 306.6 448 42.6
Sabra19G0036100 Salix brachista HOM05D006063 ORTHO05D000023 2.7e-80 303.5 448 42.4
Migut.F02045 Erythranthe guttata HOM05D006063 ORTHO05D000023 1.0e-79 301.6 454 40.1
Manes.09G145100 Manihot esculenta HOM05D006063 ORTHO05D000023 2.9e-79 300.1 448 41.1
Potri.019G029400 Populus trichocarpa HOM05D006063 ORTHO05D000023 3.8e-79 299.7 447 42.7
Gohir.D13G106000 Gossypium hirsutum HOM05D006063 ORTHO05D000023 8.5e-79 298.5 455 42.9
Gorai.013G118800 Gossypium raimondii HOM05D006063 ORTHO05D000023 3.2e-78 296.6 455 42.6
Peaxi162Scf00071g01413 Petunia axillaris HOM05D006063 ORTHO05D000023 1.6e-77 294.3 446 44.2
SHI14775 Sapria himalayana HOM05D006063 ORTHO05D000023 2.7e-77 293.5 455 39.6
SalBow1G1068 Salvia bowleyana HOM05D006063 ORTHO05D000023 4.7e-77 292.7 444 40.5
HanXRQChr15g0491401 Helianthus annuus HOM05D006063 ORTHO05D000023 1.8e-76 290.8 442 42.3
Nitab4.5_0004201g0010 Nicotiana tabacum HOM05D006063 ORTHO05D000023 3.0e-76 290.0 450 42.0
CSS0046279 Camellia sinensis var. sinensis HOM05D006063 ORTHO05D000023 4.0e-76 289.7 280 56.8
AUR62005299 Chenopodium quinoa HOM05D006063 ORTHO05D000765 4.0e-76 289.7 392 43.1
Oeu010183.1 Olea europaea HOM05D006063 ORTHO05D000023 4.8e-74 282.7 289 49.8
SGA_v2.0_scaffold62G21476 Striga asiatica HOM05D006063 ORTHO05D000023 1.8e-73 280.8 441 39.2
Sp3g03130 Schrenkiella parvula HOM05D006063 ORTHO05D000023 5.4e-73 279.3 452 41.2
SalBow1G3325 Salvia bowleyana HOM05D006063 ORTHO05D000023 9.1e-73 278.5 441 39.7
Eucgr.H04160 Eucalyptus grandis HOM05D006063 ORTHO05D000023 1.2e-72 278.1 405 42.5
Lalb_Chr21g0311331 Lupinus albus HOM05D006063 ORTHO05D000023 2.0e-72 277.3 418 41.4
ATR0618G015 Amborella trichopoda HOM05D006063 ORTHO05D000023 4.2e-70 269.6 457 38.1
MBI07_g04744_MAGBIO Magnolia biondii HOM05D006063 ORTHO05D000023 2.1e-69 267.3 390 44.9
CiPaw.07G075500 Carya illinoinensis HOM05D006063 ORTHO05D000023 6.1e-69 265.8 438 43.2
AT3G04160 Arabidopsis thaliana HOM05D006063 ORTHO05D000023 3.0e-68 263.5 504 36.7
Carub.0003s0342 Capsella rubella HOM05D006063 ORTHO05D000023 1.5e-67 261.2 446 40.4
Glyma.10G169000 Glycine max HOM05D006063 ORTHO05D000023 1.5e-67 261.2 420 41.0
CARHR078300 Cardamine hirsuta HOM05D006063 ORTHO05D000023 2.6e-67 260.4 451 37.3
VMungo0720G1344 Vigna mungo HOM05D006063 ORTHO05D000023 1.4e-65 254.6 419 39.4
FAN05G5389 Fragaria x ananassa HOM05D006063 ORTHO05D000023 1.8e-65 254.2 281 51.2
THA.LOC104820746 Tarenaya hassleriana HOM05D006063 ORTHO05D000023 1.8e-65 254.2 473 36.2
A03p33520 Brassica napus HOM05D006063 ORTHO05D000023 1.0e-63 248.4 433 38.6
MBI18_g19284_MAGBIO Magnolia biondii HOM05D006063 ORTHO05D000023 1.3e-63 248.1 259 53.7
AL3G14090 Arabidopsis lyrata HOM05D006063 ORTHO05D000023 2.3e-63 247.3 454 38.3
Phvul.L001648 Phaseolus vulgaris HOM05D006063 ORTHO05D000023 6.6e-63 245.7 425 39.3
BolC3t16339H Brassica oleracea HOM05D006063 ORTHO05D000023 1.1e-62 245.0 418 39.5
Thhalv10020148m.g Eutrema salsugineum HOM05D006063 ORTHO05D000023 1.5e-62 244.6 453 38.4
BraA03t12527Z Brassica rapa HOM05D006063 ORTHO05D000023 2.5e-62 243.8 433 37.9
arahy.Tifrunner.gnm1.ann1.2N7XA4 Arachis hypogaea HOM05D006063 ORTHO05D000023 3.3e-62 243.4 423 37.8
arahy.Tifrunner.gnm1.ann1.JVQ2Z4 Arachis hypogaea HOM05D006063 ORTHO05D000023 5.6e-62 242.7 420 37.9
Ca_09979_v3 Cicer arietinum L. HOM05D006063 ORTHO05D000023 1.2e-61 241.5 415 38.6
Ca_09995_v3 Cicer arietinum L. HOM05D006063 ORTHO05D000023 1.2e-61 241.5 415 38.6
C03p40730 Brassica napus HOM05D006063 ORTHO05D000023 1.6e-61 241.1 415 39.0
Lj3g0014127 Lotus japonicus HOM05D006063 ORTHO05D000023 3.1e-60 236.9 418 38.0
BcaC01g04385 Brassica carinata HOM05D006063 ORTHO05D000023 8.9e-60 235.3 404 40.3
Aa31LG5G14700 Aethionema arabicum HOM05D006063 ORTHO05D000023 2.0e-59 234.2 477 35.8
BcaB04g19349 Brassica carinata HOM05D006063 ORTHO05D000023 7.5e-59 232.3 412 38.6
Medtr1g079470 Medicago truncatula HOM05D006063 ORTHO05D000023 1.6e-56 224.6 415 39.3
Haze_04487 Corylus avellana HOM05D006063 ORTHO05D000023 7.8e-56 222.2 274 48.9
Atru.chr2.1232 Acer truncatum HOM05D006063 ORTHO05D000023 6.6e-55 219.2 343 39.7
Gohir.A13G102800 Gossypium hirsutum HOM05D006063 ORTHO05D000023 1.2e-51 208.4 240 49.2
QL07p027196 Quercus lobata HOM05D006063 ORTHO05D000023 4.7e-45 186.4 354 37.0
TPR.G10281 Trifolium pratense HOM05D006063 ORTHO05D000023 1.8e-44 184.5 333 36.0
RcHm_v2.0_Chr3g0448821 Rosa chinensis HOM05D006063 ORTHO05D000023 2.2e-42 177.6 217 50.2
CDE05G2869 Ceratophyllum demersum HOM05D006063 ORTHO05D000023 5.1e-39 166.4 227 41.4
HPP92_006232 Vanilla planifolia HOM05D006063 ORTHO05D000023 1.4e-33 148.3 237 38.8
ECA232G4499 Erigeron canadensis HOM05D006063 ORTHO05D000023 1.3e-31 141.7 192 47.4
DCAR_005531 Daucus carota HOM05D006063 ORTHO05D000023 3.0e-31 140.6 357 32.5
MBI18_g46979_MAGBIO Magnolia biondii HOM05D006063 ORTHO05D000023 6.6e-31 139.4 224 41.1
Zm00001eb086400 Zea mays HOM05D006063 ORTHO05D000023 8.7e-31 139.0 272 36.8
SMO351G0027 Selaginella moellendorffii HOM05D006063 ORTHO05D000023 1.1e-30 138.7 405 29.6
Os04g0349401 Oryza sativa ssp. japonica HOM05D006063 ORTHO05D000023 1.3e-29 135.2 223 40.8
Pp3c17_4760 Physcomitrium patens HOM05D006063 ORTHO05D000023 1.6e-29 134.8 305 28.2
A05p43190 Brassica napus HOM05D006063 ORTHO05D000023 1.4e-28 131.7 223 39.5
AagrBONN_evm.TU.Sc2ySwM_362.520 Anthoceros agrestis HOM05D006063 ORTHO05D000023 1.1e-25 122.1 496 25.8
Psat6g141160 Pisum sativum HOM05D006063 ORTHO05D000023 1.2e-24 118.6 201 41.3
Mapoly0001s0430 Marchantia polymorpha HOM05D006063 ORTHO05D000023 3.3e-22 110.5 515 22.9
GSVIVG01026370001 Vitis vinifera HOM05D006063 ORTHO05D000023 1.8e-20 104.8 83 65.1
COL.COLO4_20542 Corchorus olitorius HOM05D006063 ORTHO05D000023 4.5e-19 100.1 90 61.1
HPP92_006233 Vanilla planifolia HOM05D006063 ORTHO05D000023 6.4e-18 96.3 75 61.3
Cpa.g.sc51.65 Carica papaya HOM05D006063 ORTHO05D000023 4.6e-16 90.1 145 36.6
FvH4_5g38930 Fragaria vesca HOM05D006063 ORTHO05D000023 1.0e-15 89.0 80 56.2
CsaV3_1G044530 Cucumis sativus L. HOM05D006063 ORTHO05D000023 2.8e-13 80.9 98 50.0
CDE05G3203 Ceratophyllum demersum HOM05D006063 ORTHO05D000023 3.1e-12 77.4 75 53.3
RcHm_v2.0_Chr3g0448831 Rosa chinensis HOM05D006063 ORTHO05D000023 7.6e-11 72.8 147 32.0
CBR_g8884 Chara braunii HOM05D006063 ORTHO05D000023 1.3e-07 62.0 99 28.3
Atru.chr2.1231 Acer truncatum HOM05D006063 ORTHO05D000023 5.1e-07 60.1 39 74.4
Cpa.g.sc51.64 Carica papaya HOM05D006063 ORTHO05D000023 6.7e-07 59.7 106 39.6


User provided reference genes

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