Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv03782 Davidia involucrata HOM05D006063 ORTHO05D045148 1.6e-169 599.4 316 100.0
Dinv08590 Davidia involucrata HOM05D010100 ORTHO05D006370 7.2e-24 115.5 229 43.7
Dinv35452 Davidia involucrata HOM05D013474 ORTHO05D045148 4.0e-22 109.8 168 43.5
Dinv11541 Davidia involucrata HOM05D013474 ORTHO05D006370 6.3e-12 75.9 258 31.4
Dinv01405 Davidia involucrata HOM05D010100 ORTHO05D006370 3.1e-11 73.6 191 36.1
Lj2A50T27 Lonicera japonica HOM05D006063 ORTHO05D000023 2.3e-09 67.4 41 82.9
RcHm_v2.0_Chr3g0448821 Rosa chinensis HOM05D006063 ORTHO05D000023 2.9e-09 67.0 40 85.0
MBI18_g46979_MAGBIO Magnolia biondii HOM05D006063 ORTHO05D000023 5.0e-09 66.2 48 68.8
FvH4_5g38930 Fragaria vesca HOM05D006063 ORTHO05D000023 6.6e-09 65.9 42 78.6
FvH4_6g01260 Fragaria vesca HOM05D006063 ORTHO05D000023 6.6e-09 65.9 40 82.5
FAN02G3689 Fragaria x ananassa HOM05D006063 ORTHO05D000023 6.6e-09 65.9 40 82.5
FAN05G5389 Fragaria x ananassa HOM05D006063 ORTHO05D000023 6.6e-09 65.9 40 82.5
FAN09G4822 Fragaria x ananassa HOM05D006063 ORTHO05D000023 6.6e-09 65.9 40 82.5
MBI07_g04744_MAGBIO Magnolia biondii HOM05D006063 ORTHO05D000023 1.1e-08 65.1 40 80.0
Actinidia34754 Actinidia chinensis HOM05D006063 ORTHO05D000023 1.5e-08 64.7 40 82.5
Atru.chr2.1231 Acer truncatum HOM05D006063 ORTHO05D000023 1.9e-08 64.3 40 82.5
CAN.G4.18 Capsicum annuum HOM05D006063 ORTHO05D000023 1.9e-08 64.3 43 74.4
FAN05G0856 Fragaria x ananassa HOM05D006063 ORTHO05D000023 1.9e-08 64.3 40 80.0
MBI18_g19284_MAGBIO Magnolia biondii HOM05D006063 ORTHO05D000023 1.9e-08 64.3 123 39.8
Nitab4.5_0000504g0070 Nicotiana tabacum HOM05D006063 ORTHO05D000023 1.9e-08 64.3 43 74.4
Potri.019G029400 Populus trichocarpa HOM05D006063 ORTHO05D000023 1.9e-08 64.3 40 82.5
QL07p027196 Quercus lobata HOM05D006063 ORTHO05D000023 1.9e-08 64.3 41 80.5
Manes.09G145100 Manihot esculenta HOM05D006063 ORTHO05D000023 2.5e-08 63.9 40 82.5
Hund07147 Selenicereus undatus HOM05D006063 ORTHO05D000023 2.5e-08 63.9 46 71.7
ClCG03G011330 Citrullus lanatus HOM05D006063 ORTHO05D000023 3.3e-08 63.5 41 78.0
Cc09_g03150 Coffea canephora HOM05D006063 ORTHO05D000023 3.3e-08 63.5 37 83.8
Sc16g0010060 Simmondsia chinensis HOM05D006063 ORTHO05D000023 3.3e-08 63.5 45 73.3
Rhsim09G0137100 Rhododendron simsii HOM05D006063 ORTHO05D000023 4.2e-08 63.2 40 80.0
Sabra19G0036100 Salix brachista HOM05D006063 ORTHO05D000023 4.2e-08 63.2 40 80.0
Sabra19G0039200 Salix brachista HOM05D006063 ORTHO05D000023 4.2e-08 63.2 40 80.0
vmacro10365 Vaccinium macrocarpon HOM05D006063 ORTHO05D000023 4.2e-08 63.2 40 80.0
EL10Ac4g09796 Beta vulgaris HOM05D006063 ORTHO05D000023 5.6e-08 62.8 41 80.5
Nitab4.5_0004201g0010 Nicotiana tabacum HOM05D006063 ORTHO05D000023 5.6e-08 62.8 43 72.1
Prupe.6G355400 Prunus persica HOM05D006063 ORTHO05D000023 5.6e-08 62.8 37 89.2
Sed0026121 Sechium edule HOM05D006063 ORTHO05D000023 5.6e-08 62.8 40 77.5
CSS0004581 Camellia sinensis var. sinensis HOM05D006063 ORTHO05D000023 7.2e-08 62.4 40 80.0
CSS0046279 Camellia sinensis var. sinensis HOM05D006063 ORTHO05D000023 7.2e-08 62.4 40 80.0
Mapoly0001s0430 Marchantia polymorpha HOM05D006063 ORTHO05D000023 7.2e-08 62.4 40 80.0
PGSC0003DMG400015112 Solanum tuberosum HOM05D006063 ORTHO05D000023 7.2e-08 62.4 43 72.1
CDE05G3203 Ceratophyllum demersum HOM05D006063 ORTHO05D000023 9.5e-08 62.0 43 76.7
BcaB04g19349 Brassica carinata HOM05D006063 ORTHO05D000023 1.2e-07 61.6 44 77.3
CiPaw.07G075500 Carya illinoinensis HOM05D006063 ORTHO05D000023 1.2e-07 61.6 39 82.1
MELO3C010119.2 Cucumis melo HOM05D006063 ORTHO05D000023 1.2e-07 61.6 40 77.5
CsaV3_1G044890 Cucumis sativus L. HOM05D006063 ORTHO05D000023 1.2e-07 61.6 40 77.5
Aqoxy2G04022 Aquilegia oxysepala HOM05D006063 ORTHO05D000023 1.6e-07 61.2 40 75.0
AL3G14090 Arabidopsis lyrata HOM05D006063 ORTHO05D000023 1.6e-07 61.2 38 81.6
MSTRG.9222 Avicennia marina HOM05D006063 ORTHO05D000023 1.6e-07 61.2 40 77.5
Cpa.g.sc51.61 Carica papaya HOM05D006063 ORTHO05D000023 1.6e-07 61.2 40 77.5
ECA232G4499 Erigeron canadensis HOM05D006063 ORTHO05D000023 1.6e-07 61.2 40 75.0
Thhalv10020148m.g Eutrema salsugineum HOM05D006063 ORTHO05D000023 1.6e-07 61.2 40 77.5
Sp3g03130 Schrenkiella parvula HOM05D006063 ORTHO05D000023 1.6e-07 61.2 40 77.5
TWI34G0066 Tripterygium wilfordii HOM05D006063 ORTHO05D000023 1.6e-07 61.2 40 75.0
TAR362G1155 Trochodendron aralioides HOM05D006063 ORTHO05D000023 1.6e-07 61.2 40 77.5
PSO017G2613 Papaver somniferum HOM05D006063 ORTHO05D000023 2.1e-07 60.8 40 75.0
PSO063G1700 Papaver somniferum HOM05D006063 ORTHO05D000023 2.1e-07 60.8 40 75.0
GSVIVG01026370001 Vitis vinifera HOM05D006063 ORTHO05D000023 2.1e-07 60.8 40 75.0
Aa31LG5G14700 Aethionema arabicum HOM05D006063 ORTHO05D000023 2.8e-07 60.5 40 77.5
COL.COLO4_20542 Corchorus olitorius HOM05D006063 ORTHO05D000023 2.8e-07 60.5 40 72.5
Migut.F02045 Erythranthe guttata HOM05D006063 ORTHO05D000023 2.8e-07 60.5 42 71.4
Gohir.A13G102800 Gossypium hirsutum HOM05D006063 ORTHO05D000023 2.8e-07 60.5 40 75.0
Gohir.D13G106000 Gossypium hirsutum HOM05D006063 ORTHO05D000023 2.8e-07 60.5 40 75.0
Gorai.013G118800 Gossypium raimondii HOM05D006063 ORTHO05D000023 2.8e-07 60.5 40 75.0
Peaxi162Scf00071g01413 Petunia axillaris HOM05D006063 ORTHO05D000023 2.8e-07 60.5 43 69.8
Oeu010183.1 Olea europaea HOM05D006063 ORTHO05D000023 3.6e-07 60.1 40 75.0
Sopen04g021710 Solanum pennellii HOM05D006063 ORTHO05D000023 3.6e-07 60.1 43 69.8
BraA05t23062Z Brassica rapa HOM05D006063 ORTHO05D000023 4.7e-07 59.7 41 75.6
Carub.0003s0342 Capsella rubella HOM05D006063 ORTHO05D000023 4.7e-07 59.7 40 75.0
CARHR078300 Cardamine hirsuta HOM05D006063 ORTHO05D000023 4.7e-07 59.7 40 75.0
SalBow1G1068 Salvia bowleyana HOM05D006063 ORTHO05D000023 4.7e-07 59.7 40 72.5
SalBow1G3325 Salvia bowleyana HOM05D006063 ORTHO05D000023 4.7e-07 59.7 40 72.5
AT3G04160 Arabidopsis thaliana HOM05D006063 ORTHO05D000023 6.1e-07 59.3 38 78.9
A03p33520 Brassica napus HOM05D006063 ORTHO05D000023 6.1e-07 59.3 40 75.0
A05p43200 Brassica napus HOM05D000005 ORTHO05D000449 6.1e-07 59.3 40 75.0
BraA03t12527Z Brassica rapa HOM05D006063 ORTHO05D000023 6.1e-07 59.3 40 75.0
HanXRQChr15g0491401 Helianthus annuus HOM05D006063 ORTHO05D000023 8.0e-07 58.9 40 70.0
Thecc.05G261400 Theobroma cacao HOM05D006063 ORTHO05D000023 8.0e-07 58.9 39 76.9
ATR0618G015 Amborella trichopoda HOM05D006063 ORTHO05D000023 1.0e-06 58.5 37 81.1
Lsat_1_v5_gn_9_46040 Lactuca sativa HOM05D006063 ORTHO05D000023 1.0e-06 58.5 40 72.5
Ciclev10019009m.g Citrus clementina HOM05D006063 ORTHO05D000023 1.4e-06 58.2 40 72.5
MD04G1235500 Malus domestica HOM05D006063 ORTHO05D000023 1.4e-06 58.2 37 83.8
CsaV3_1G044530 Cucumis sativus L. HOM05D006063 ORTHO05D000023 1.8e-06 57.8 37 81.1
Solyc04g050760.4 Solanum lycopersicum HOM05D006063 ORTHO05D000023 1.8e-06 57.8 43 67.4
BcaC01g04385 Brassica carinata HOM05D006063 ORTHO05D000023 3.0e-06 57.0 40 72.5
C03p40730 Brassica napus HOM05D006063 ORTHO05D000023 3.0e-06 57.0 40 72.5
BolC3t16339H Brassica oleracea HOM05D006063 ORTHO05D000023 3.0e-06 57.0 40 72.5
A05p43190 Brassica napus HOM05D006063 ORTHO05D000023 4.0e-06 56.6 38 76.3
CANSAT54G1152 Cannabis sativa HOM05D006063 ORTHO05D000023 4.0e-06 56.6 40 70.0
AUR62005299 Chenopodium quinoa HOM05D006063 ORTHO05D000765 5.2e-06 56.2 50 56.0
Lalb_Chr21g0311331 Lupinus albus HOM05D006063 ORTHO05D000023 5.2e-06 56.2 40 70.0
AagrBONN_evm.TU.Sc2ySwM_362.520 Anthoceros agrestis HOM05D006063 ORTHO05D000023 6.8e-06 55.8 41 65.9
Medtr1g079470 Medicago truncatula HOM05D006063 ORTHO05D000023 6.8e-06 55.8 40 72.5
Ca_09979_v3 Cicer arietinum L. HOM05D006063 ORTHO05D000023 8.9e-06 55.5 46 63.0
Ca_09995_v3 Cicer arietinum L. HOM05D006063 ORTHO05D000023 8.9e-06 55.5 46 63.0
Eucgr.H04160 Eucalyptus grandis HOM05D006063 ORTHO05D000023 8.9e-06 55.5 40 70.0
SMO351G0027 Selaginella moellendorffii HOM05D006063 ORTHO05D000023 8.9e-06 55.5 66 47.0


User provided reference genes

Program Settings