Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv03778 Davidia involucrata HOM05D006063 ORTHO05D045100 9.6e-143 510.4 302 100.0
CSS0004581 Camellia sinensis var. sinensis HOM05D006063 ORTHO05D000023 1.8e-40 170.6 252 46.4
CSS0046279 Camellia sinensis var. sinensis HOM05D006063 ORTHO05D000023 1.8e-40 170.6 252 46.4
Rhsim09G0137100 Rhododendron simsii HOM05D006063 ORTHO05D000023 1.1e-29 134.8 299 39.5
Hma1.2p1_0153F.1_g067860 Hydrangea macrophylla HOM05D006063 ORTHO05D045100 4.6e-28 129.4 241 41.5
vmacro10365 Vaccinium macrocarpon HOM05D006063 ORTHO05D000023 3.0e-27 126.7 256 39.1
Actinidia34754 Actinidia chinensis HOM05D006063 ORTHO05D000023 1.3e-22 111.3 251 39.0
TAR362G1155 Trochodendron aralioides HOM05D006063 ORTHO05D000023 3.5e-20 103.2 269 34.2
Nitab4.5_0004201g0010 Nicotiana tabacum HOM05D006063 ORTHO05D000023 3.7e-17 93.2 250 33.2
MD04G1235500 Malus domestica HOM05D006063 ORTHO05D000023 2.6e-15 87.0 254 31.5
Thecc.05G261400 Theobroma cacao HOM05D006063 ORTHO05D000023 7.6e-15 85.5 264 29.5
Nitab4.5_0000504g0070 Nicotiana tabacum HOM05D006063 ORTHO05D000023 2.9e-14 83.6 249 33.7
Oeu010183.1 Olea europaea HOM05D006063 ORTHO05D000023 3.2e-13 80.1 254 29.1
Manes.09G145100 Manihot esculenta HOM05D006063 ORTHO05D000023 5.5e-13 79.3 260 31.9
Potri.019G029400 Populus trichocarpa HOM05D006063 ORTHO05D000023 1.6e-12 77.8 256 30.5
MBI07_g04744_MAGBIO Magnolia biondii HOM05D006063 ORTHO05D000023 1.0e-11 75.1 263 30.4
MBI18_g46979_MAGBIO Magnolia biondii HOM05D006063 ORTHO05D000023 2.3e-11 73.9 271 33.2
QL07p027196 Quercus lobata HOM05D006063 ORTHO05D000023 2.3e-11 73.9 287 29.3
FAN09G4822 Fragaria x ananassa HOM05D006063 ORTHO05D000023 3.3e-10 70.1 252 32.9
COL.COLO4_20542 Corchorus olitorius HOM05D006063 ORTHO05D000023 4.3e-10 69.7 256 40.2
Sabra19G0036100 Salix brachista HOM05D006063 ORTHO05D000023 7.4e-10 68.9 259 30.1
Sabra19G0039200 Salix brachista HOM05D006063 ORTHO05D000023 9.7e-10 68.6 259 29.7
GSVIVG01026370001 Vitis vinifera HOM05D006063 ORTHO05D000023 1.6e-09 67.8 307 31.3
Haze_04487 Corylus avellana HOM05D006063 ORTHO05D000023 2.8e-09 67.0 257 29.2
Aqoxy2G04022 Aquilegia oxysepala HOM05D006063 ORTHO05D000023 4.8e-09 66.2 260 27.7
Gohir.D13G106000 Gossypium hirsutum HOM05D006063 ORTHO05D000023 6.3e-09 65.9 253 27.3
Gorai.013G118800 Gossypium raimondii HOM05D006063 ORTHO05D000023 6.3e-09 65.9 253 27.3
Solyc04g050760.4 Solanum lycopersicum HOM05D006063 ORTHO05D000023 1.8e-08 64.3 248 28.6
Sopen04g021710 Solanum pennellii HOM05D006063 ORTHO05D000023 1.8e-08 64.3 248 29.0
FvH4_6g01260 Fragaria vesca HOM05D006063 ORTHO05D000023 2.4e-08 63.9 252 31.3
PGSC0003DMG400015112 Solanum tuberosum HOM05D006063 ORTHO05D000023 6.9e-08 62.4 248 29.8
CAN.G4.18 Capsicum annuum HOM05D006063 ORTHO05D000023 1.2e-07 61.6 249 29.7
FAN05G0856 Fragaria x ananassa HOM05D006063 ORTHO05D000023 1.5e-07 61.2 250 31.6
Ciclev10019009m.g Citrus clementina HOM05D006063 ORTHO05D000023 2.6e-07 60.5 256 28.9
TWI34G0066 Tripterygium wilfordii HOM05D006063 ORTHO05D000023 4.5e-07 59.7 261 29.5
FAN05G5389 Fragaria x ananassa HOM05D006063 ORTHO05D000023 7.7e-07 58.9 250 30.0
FAN02G3689 Fragaria x ananassa HOM05D006063 ORTHO05D000023 2.9e-06 57.0 252 31.3
Sc16g0010060 Simmondsia chinensis HOM05D006063 ORTHO05D000023 2.9e-06 57.0 251 35.9
CANSAT54G1152 Cannabis sativa HOM05D006063 ORTHO05D000023 3.8e-06 56.6 131 35.1
Gohir.A13G102800 Gossypium hirsutum HOM05D006063 ORTHO05D000023 8.5e-06 55.5 254 35.4
MBI18_g19284_MAGBIO Magnolia biondii HOM05D006063 ORTHO05D000023 8.5e-06 55.5 47 63.8


User provided reference genes

Program Settings