Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv03772 Davidia involucrata HOM05D001469 ORTHO05D017168 2.5e-110 402.1 204 100.0
Dinv03774 Davidia involucrata HOM05D001469 ORTHO05D001648 4.8e-21 105.5 57 89.5
Dinv03771 Davidia involucrata HOM05D001469 ORTHO05D001648 9.4e-17 91.3 57 77.2
Dinv01784 Davidia involucrata HOM05D001469 ORTHO05D001648 8.0e-16 88.2 57 75.4
Dinv03770 Davidia involucrata HOM05D001469 ORTHO05D001648 5.9e-11 72.0 57 68.4
Hma1.2p1_0702F.1_g206110 Hydrangea macrophylla HOM05D001469 ORTHO05D001648 1.3e-10 70.9 61 63.9
Oeu023318.1 Olea europaea HOM05D001469 ORTHO05D001648 5.0e-10 68.9 57 61.4
CSS0021239 Camellia sinensis var. sinensis HOM05D001469 ORTHO05D001648 1.1e-09 67.8 60 60.0
CSS0040447 Camellia sinensis var. sinensis HOM05D001469 ORTHO05D001648 1.5e-09 67.4 60 60.0
CSS0001052 Camellia sinensis var. sinensis HOM05D001469 ORTHO05D001648 4.2e-09 65.9 57 63.2
GSVIVG01021992001 Vitis vinifera HOM05D001469 ORTHO05D001648 1.2e-08 64.3 60 56.7
Eucgr.B02033 Eucalyptus grandis HOM05D001469 ORTHO05D001648 2.1e-08 63.5 64 56.2
CSS0043837 Camellia sinensis var. sinensis HOM05D001469 ORTHO05D001648 3.6e-08 62.8 57 59.6
CAN.G305.27 Capsicum annuum HOM05D001469 ORTHO05D001648 3.6e-08 62.8 60 60.0
ClCG11G011220 Citrullus lanatus HOM05D001469 ORTHO05D001648 3.6e-08 62.8 57 54.4
MELO3C003911.2 Cucumis melo HOM05D001469 ORTHO05D001648 3.6e-08 62.8 57 54.4
CsaV3_2G009220 Cucumis sativus L. HOM05D001469 ORTHO05D001648 3.6e-08 62.8 57 54.4
Dinv00875 Davidia involucrata HOM05D001469 ORTHO05D001648 4.7e-08 62.4 57 59.6
Migut.H02535 Erythranthe guttata HOM05D001469 ORTHO05D001648 6.1e-08 62.0 57 56.1
Nn4g26065 Nelumbo nucifera HOM05D001469 ORTHO05D001648 6.1e-08 62.0 57 54.4
SGA_v2.0_scaffold51G18832 Striga asiatica HOM05D001469 ORTHO05D001648 1.0e-07 61.2 62 59.7
Lj1g0022507 Lotus japonicus HOM05D001469 ORTHO05D001648 1.4e-07 60.8 63 54.0
TAR362G0779 Trochodendron aralioides HOM05D001469 ORTHO05D001648 1.4e-07 60.8 57 56.1
Nn3g21253 Nelumbo nucifera HOM05D001469 ORTHO05D001648 1.8e-07 60.5 57 54.4
Haze_04272 Corylus avellana HOM05D001469 ORTHO05D017168 2.3e-07 60.1 56 53.6
DCAR_022262 Daucus carota HOM05D001469 ORTHO05D001648 2.3e-07 60.1 57 59.6
QL03p060617 Quercus lobata HOM05D001469 ORTHO05D001648 2.3e-07 60.1 57 56.1
Actinidia05740 Actinidia chinensis HOM05D001469 ORTHO05D001648 3.0e-07 59.7 57 52.6
Dinv00661 Davidia involucrata HOM05D001469 ORTHO05D001648 3.0e-07 59.7 57 57.9
TAR362G1224 Trochodendron aralioides HOM05D001469 ORTHO05D001648 3.0e-07 59.7 57 56.1
Haze_04271 Corylus avellana HOM05D001469 ORTHO05D017168 4.0e-07 59.3 56 53.6
AUR62005069 Chenopodium quinoa HOM05D001469 ORTHO05D001648 5.2e-07 58.9 57 56.1
Sed0016636 Sechium edule HOM05D001469 ORTHO05D001648 5.2e-07 58.9 57 52.6
Cfa006514 Carpinus fangiana HOM05D001469 ORTHO05D001648 6.8e-07 58.5 57 49.1
Glyma.19G239500 Glycine max HOM05D001469 ORTHO05D001648 6.8e-07 58.5 56 50.0
Lj7C484G3 Lonicera japonica HOM05D001469 ORTHO05D001648 6.8e-07 58.5 56 58.9
MD12G1228100 Malus domestica HOM05D001469 ORTHO05D017168 6.8e-07 58.5 57 52.6
TAR633G1584 Trochodendron aralioides HOM05D001469 ORTHO05D001648 6.8e-07 58.5 57 54.4
CAN.G305.26 Capsicum annuum HOM05D001469 ORTHO05D023324 8.8e-07 58.2 62 54.8
PSO170G0478 Papaver somniferum HOM05D001469 ORTHO05D001648 1.2e-06 57.8 57 54.4
PSO407G0136 Papaver somniferum HOM05D001469 ORTHO05D001648 1.2e-06 57.8 57 54.4
GSVIVG01021994001 Vitis vinifera HOM05D001469 ORTHO05D017168 1.2e-06 57.8 68 51.5
GSVIVG01021997001 Vitis vinifera HOM05D001469 ORTHO05D001648 1.2e-06 57.8 60 53.3
Gorai.013G115900 Gossypium raimondii HOM05D001469 ORTHO05D001648 1.5e-06 57.4 58 50.0
MD12G1228200 Malus domestica HOM05D001469 ORTHO05D001648 1.5e-06 57.4 57 50.9
MD12G1228300 Malus domestica HOM05D001469 ORTHO05D001648 1.5e-06 57.4 57 50.9
Hund21671 Selenicereus undatus HOM05D001469 ORTHO05D001648 1.5e-06 57.4 59 52.5
Manes.08G125011 Manihot esculenta HOM05D001469 ORTHO05D001648 2.0e-06 57.0 58 53.4
Rhsim05G0146700 Rhododendron simsii HOM05D001469 ORTHO05D001648 2.6e-06 56.6 57 54.4
CANSAT54G2243 Cannabis sativa HOM05D001469 ORTHO05D001648 3.4e-06 56.2 57 47.4
CARHR008780 Cardamine hirsuta HOM05D001469 ORTHO05D001648 3.4e-06 56.2 58 50.0
CiPaw.08G169400 Carya illinoinensis HOM05D001469 ORTHO05D017168 3.4e-06 56.2 57 49.1
QL03p053454 Quercus lobata HOM05D001469 ORTHO05D001648 3.4e-06 56.2 57 45.6
GSVIVG01022002001 Vitis vinifera HOM05D001469 ORTHO05D001648 3.4e-06 56.2 60 51.7
Cc02_g32840 Coffea canephora HOM05D001469 ORTHO05D001648 7.5e-06 55.1 65 49.2
CiPaw.07G012100 Carya illinoinensis HOM05D001469 ORTHO05D001648 9.8e-06 54.7 57 50.9
PSO170G5326 Papaver somniferum HOM05D001469 ORTHO05D001648 9.8e-06 54.7 57 52.6


User provided reference genes

Program Settings