Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv03669 Davidia involucrata HOM05D008080 ORTHO05D010244 2.0e-43 178.7 89 100.0
MBI04_g15074_MAGBIO Magnolia biondii HOM05D008080 ORTHO05D010244 1.9e-22 109.0 66 78.8
Actinidia22242 Actinidia chinensis HOM05D008080 ORTHO05D010244 2.5e-22 108.6 68 82.4
CSS0035203 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 2.1e-21 105.5 63 85.7
Potri.001G454900 Populus trichocarpa HOM05D008080 ORTHO05D010244 3.6e-21 104.8 65 80.0
Prupe.5G137900 Prunus persica HOM05D008080 ORTHO05D010244 6.1e-21 104.0 64 81.2
QL02p026515 Quercus lobata HOM05D008080 ORTHO05D010244 1.4e-20 102.8 64 78.1
Thecc.03G213000 Theobroma cacao HOM05D008080 ORTHO05D010244 1.4e-20 102.8 66 78.8
Duzib205G0863 Durio zibethinus HOM05D008080 ORTHO05D010244 4.0e-20 101.3 66 80.3
Gohir.D03G089300 Gossypium hirsutum HOM05D008080 ORTHO05D010244 4.0e-20 101.3 66 78.8
Gorai.003G072100 Gossypium raimondii HOM05D008080 ORTHO05D010244 4.0e-20 101.3 66 78.8
Sabra16G0307700 Salix brachista HOM05D008080 ORTHO05D010244 4.0e-20 101.3 66 75.8
Gohir.A03G078700 Gossypium hirsutum HOM05D008080 ORTHO05D010244 8.8e-20 100.1 66 77.3
FvH4_5g10080 Fragaria vesca HOM05D008080 ORTHO05D010244 1.2e-19 99.8 65 75.4
FAN08G1106 Fragaria x ananassa HOM05D008080 ORTHO05D010244 1.2e-19 99.8 65 75.4
FAN18G1060 Fragaria x ananassa HOM05D008080 ORTHO05D010244 1.2e-19 99.8 65 75.4
MD06G1128100 Malus domestica HOM05D008080 ORTHO05D010244 1.2e-19 99.8 65 76.9
CiPaw.11G105600 Carya illinoinensis HOM05D008080 ORTHO05D010244 2.0e-19 99.0 64 78.1
GSVIVG01019727001 Vitis vinifera HOM05D008080 ORTHO05D006305 2.0e-19 99.0 63 79.4
PGR031G3362 Punica granatum HOM05D008080 ORTHO05D010244 2.6e-19 98.6 66 71.2
RcHm_v2.0_Chr7g0188191 Rosa chinensis HOM05D008080 ORTHO05D010244 2.6e-19 98.6 65 73.8
DCAR_028394 Daucus carota HOM05D008080 ORTHO05D010244 3.4e-19 98.2 66 74.2
Lj2A146T28 Lonicera japonica HOM05D008080 ORTHO05D010244 5.7e-19 97.4 66 75.8
Rhsim02G0256000 Rhododendron simsii HOM05D008080 ORTHO05D010244 5.7e-19 97.4 65 76.9
Aqoxy5G03619 Aquilegia oxysepala HOM05D008080 ORTHO05D010244 1.7e-18 95.9 66 71.2
Potri.011G147000 Populus trichocarpa HOM05D008080 ORTHO05D010244 1.7e-18 95.9 67 76.1
CANSAT21G2269 Cannabis sativa HOM05D008080 ORTHO05D010244 2.2e-18 95.5 62 74.2
MBI04_g47856_MAGBIO Magnolia biondii HOM05D008080 ORTHO05D010244 3.7e-18 94.7 56 78.6
FAN04G0887 Fragaria x ananassa HOM05D008080 ORTHO05D010244 6.3e-18 94.0 65 70.8
CDE09G0306 Ceratophyllum demersum HOM05D008080 ORTHO05D010244 1.1e-17 93.2 65 70.8
CDE11G0346 Ceratophyllum demersum HOM05D008080 ORTHO05D010244 3.1e-17 91.7 65 67.7
CSS0001168 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 4.1e-17 91.3 63 73.0
CSS0020797 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 4.1e-17 91.3 63 73.0
CSS0025371 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 4.1e-17 91.3 63 73.0
CSS0037763 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 4.1e-17 91.3 63 73.0
CSS0040065 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 4.1e-17 91.3 63 73.0
CSS0004858 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 7.0e-17 90.5 63 71.4
CSS0032680 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 1.2e-16 89.7 62 72.6
Lsat_1_v5_gn_3_13260 Lactuca sativa HOM05D008080 ORTHO05D010244 1.6e-16 89.4 66 68.2
TWI81G0982 Tripterygium wilfordii HOM05D008080 ORTHO05D010244 7.7e-16 87.0 58 72.4
HanXRQChr17g0534021 Helianthus annuus HOM05D008080 ORTHO05D010244 1.0e-15 86.7 66 66.7
ECA246G2048 Erigeron canadensis HOM05D008080 ORTHO05D010244 1.3e-15 86.3 66 63.6
THA.LOC104806472 Tarenaya hassleriana HOM05D008080 ORTHO05D010244 1.3e-15 86.3 65 63.1
Os04g0577800 Oryza sativa ssp. japonica HOM05D008080 ORTHO05D010244 1.7e-15 85.9 66 65.2
Aa31LG6G7790 Aethionema arabicum HOM05D008080 ORTHO05D010244 1.1e-14 83.2 65 61.5
Zm00001eb073300 Zea mays HOM05D008080 ORTHO05D010244 1.5e-14 82.8 66 63.6
Sp1g28720 Schrenkiella parvula HOM05D008080 ORTHO05D010244 7.2e-14 80.5 65 60.0
Thhalv10008894m.g Eutrema salsugineum HOM05D008080 ORTHO05D010244 9.5e-14 80.1 65 56.9
BcaC08g43879 Brassica carinata HOM05D008080 ORTHO05D010244 1.6e-13 79.3 65 56.9
A09p32970 Brassica napus HOM05D008080 ORTHO05D010244 1.6e-13 79.3 65 56.9
BolC6t36418H Brassica oleracea HOM05D008080 ORTHO05D010244 1.6e-13 79.3 65 56.9
BraA09t38837Z Brassica rapa HOM05D008080 ORTHO05D010244 1.6e-13 79.3 65 56.9
CSS0042852 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 1.6e-13 79.3 53 75.5
C06p12680 Brassica napus HOM05D008080 ORTHO05D010244 2.1e-13 79.0 65 56.9
Thhalv10008954m.g Eutrema salsugineum HOM05D008080 ORTHO05D010244 2.1e-13 79.0 64 57.8
AL1G47660 Arabidopsis lyrata HOM05D008080 ORTHO05D010244 2.8e-13 78.6 65 56.9
AT1G33265 Arabidopsis thaliana HOM05D008080 ORTHO05D010244 3.6e-13 78.2 65 56.9
Carub.0001s3146 Capsella rubella HOM05D008080 ORTHO05D010244 3.6e-13 78.2 65 56.9
CARHR032630 Cardamine hirsuta HOM05D008080 ORTHO05D010244 3.6e-13 78.2 65 56.9
CSS0010108 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 4.7e-13 77.8 50 80.0
HPP92_014501 Vanilla planifolia HOM05D008080 ORTHO05D010244 4.7e-13 77.8 69 58.0
BcaB07g32963 Brassica carinata HOM05D008080 ORTHO05D010244 6.1e-13 77.4 65 56.9
Pp3c4_29930 Physcomitrium patens HOM05D008080 ORTHO05D010244 4.0e-12 74.7 62 53.2
Pp3c4_29940 Physcomitrium patens HOM05D008080 ORTHO05D010244 4.0e-12 74.7 62 53.2
SMO114G0056 Selaginella moellendorffii HOM05D008080 ORTHO05D010244 3.7e-10 68.2 60 56.7
Nn5g27399 Nelumbo nucifera HOM05D008080 ORTHO05D010244 3.1e-09 65.1 45 66.7


User provided reference genes

Program Settings