Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv03635 Davidia involucrata HOM05D009013 ORTHO05D009761 1.3e-186 656.4 373 100.0
Dinv32301 Davidia involucrata HOM05D009013 ORTHO05D009761 2.6e-81 306.6 356 60.7
CSS0045433 Camellia sinensis var. sinensis HOM05D014645 ORTHO05D009761 1.5e-65 254.2 477 43.8
CSS0047309 Camellia sinensis var. sinensis HOM05D014645 ORTHO05D009761 1.3e-64 251.1 448 44.6
Hma1.2p1_0015F.1_g010420 Hydrangea macrophylla HOM05D009013 ORTHO05D009761 1.9e-55 220.7 356 51.1
QL05p060720 Quercus lobata HOM05D009013 ORTHO05D009761 2.1e-46 190.7 394 38.6
Oeu046855.1 Olea europaea HOM05D012266 ORTHO05D011876 8.8e-45 185.3 382 42.9
Rhsim02G0193600 Rhododendron simsii HOM05D014645 ORTHO05D009761 2.8e-43 180.3 410 39.0
CiPaw.10G096600 Carya illinoinensis HOM05D009013 ORTHO05D009761 1.1e-42 178.3 378 40.5
DCAR_007913 Daucus carota HOM05D009013 ORTHO05D009761 1.1e-39 168.3 316 43.4
Actinidia19483 Actinidia chinensis HOM05D014645 ORTHO05D009761 7.2e-39 165.6 379 42.2
Oeu021526.1 Olea europaea HOM05D012266 ORTHO05D011876 4.7e-38 162.9 378 38.9
Haze_05479 Corylus avellana HOM05D009013 ORTHO05D009761 6.1e-38 162.5 374 38.2
TWI73G0525 Tripterygium wilfordii HOM05D009852 ORTHO05D009761 5.1e-37 159.5 378 34.9
Potri.011G077700 Populus trichocarpa HOM05D009852 ORTHO05D009761 8.8e-37 158.7 386 38.9
DCAR_003953 Daucus carota HOM05D009013 ORTHO05D009761 5.7e-36 156.0 384 34.4
TWI09G1113 Tripterygium wilfordii HOM05D009852 ORTHO05D009761 5.7e-36 156.0 378 33.3
Actinidia07666 Actinidia chinensis HOM05D014645 ORTHO05D009761 1.3e-35 154.8 374 35.6
TWI09G0214 Tripterygium wilfordii HOM05D009852 ORTHO05D009761 2.2e-35 154.1 378 33.1
Ciclev10017480m.g Citrus clementina HOM05D009852 ORTHO05D009761 1.1e-34 151.8 383 38.4
Cc00_g03210 Coffea canephora HOM05D012094 ORTHO05D009761 3.2e-31 140.2 360 32.8
Lalb_Chr12g0204801 Lupinus albus HOM05D009013 ORTHO05D009761 7.2e-31 139.0 379 36.7
Phvul.009G214600 Phaseolus vulgaris HOM05D009013 ORTHO05D009761 1.6e-30 137.9 379 35.6
DCAR_027956 Daucus carota HOM05D014645 ORTHO05D009761 2.7e-30 137.1 413 36.8
Nitab4.5_0003714g0090 Nicotiana tabacum HOM05D012094 ORTHO05D011876 4.7e-30 136.3 366 37.2
Oeu001056.1 Olea europaea HOM05D012266 ORTHO05D011876 4.7e-30 136.3 383 34.5
Actinidia27190 Actinidia chinensis HOM05D014645 ORTHO05D009761 3.0e-29 133.7 312 38.8
Actinidia39545 Actinidia chinensis HOM05D014645 ORTHO05D009761 5.2e-29 132.9 312 38.8
Sopen02g020380 Solanum pennellii HOM05D012094 ORTHO05D011876 1.1e-28 131.7 442 34.2
Cfa001036 Carpinus fangiana HOM05D009013 ORTHO05D009761 3.3e-28 130.2 371 35.6
Lj4g0005206 Lotus japonicus HOM05D009013 ORTHO05D009761 3.3e-28 130.2 392 32.9
PGSC0003DMG400003088 Solanum tuberosum HOM05D012094 ORTHO05D011876 4.4e-28 129.8 439 33.5
Thecc.06G158200 Theobroma cacao HOM05D009852 ORTHO05D009761 5.7e-28 129.4 382 34.8
Potri.001G354600 Populus trichocarpa HOM05D009852 ORTHO05D009761 3.7e-27 126.7 381 34.4
CiPaw.09G129900 Carya illinoinensis HOM05D009013 ORTHO05D009761 7.0e-26 122.5 539 28.2
Atru.chr10.1414 Acer truncatum HOM05D009852 ORTHO05D009761 1.2e-25 121.7 357 32.2
Glyma.09G085700 Glycine max HOM05D009013 ORTHO05D009761 1.2e-25 121.7 378 34.7
Nitab4.5_0001283g0020 Nicotiana tabacum HOM05D012094 ORTHO05D011876 2.0e-25 120.9 403 35.5
Duzib160G0535 Durio zibethinus HOM05D009852 ORTHO05D009761 3.5e-25 120.2 376 36.2
VMungo1309G2255 Vigna mungo HOM05D009013 ORTHO05D009761 3.5e-25 120.2 380 33.7
Duzib192G0106 Durio zibethinus HOM05D009852 ORTHO05D009761 5.9e-25 119.4 378 36.2
Lalb_Chr07g0186121 Lupinus albus HOM05D009013 ORTHO05D009761 1.7e-24 117.9 376 34.3
Manes.17G064400 Manihot esculenta HOM05D009852 ORTHO05D009761 2.9e-24 117.1 422 34.8
Manes.15G116600 Manihot esculenta HOM05D009852 ORTHO05D009761 8.5e-24 115.5 410 31.0
Prupe.4G073200 Prunus persica HOM05D014736 ORTHO05D009761 8.5e-24 115.5 377 33.2
TAR624G0539 Trochodendron aralioides HOM05D041535 ORTHO05D009761 1.1e-23 115.2 281 39.1
MSTRG.16199 Avicennia marina HOM05D012266 ORTHO05D011876 3.2e-23 113.6 378 30.4
Glyma.08G121600 Glycine max HOM05D009013 ORTHO05D009761 9.4e-23 112.1 375 31.2
Lj6g0000102 Lotus japonicus HOM05D009013 ORTHO05D009761 1.2e-22 111.7 396 36.4
Glyma.05G164200 Glycine max HOM05D009013 ORTHO05D009761 2.1e-22 110.9 374 31.3
Gorai.010G164100 Gossypium raimondii HOM05D009852 ORTHO05D009761 2.1e-22 110.9 377 34.2
Glyma.15G195700 Glycine max HOM05D009013 ORTHO05D009761 1.4e-21 108.2 378 35.4
Gohir.D06G140600 Gossypium hirsutum HOM05D009852 ORTHO05D009761 1.8e-21 107.8 377 34.2
Gorai.009G158300 Gossypium raimondii HOM05D009852 ORTHO05D009761 1.8e-21 107.8 348 36.5
SalBow7G2103 Salvia bowleyana HOM05D012266 ORTHO05D011876 1.8e-21 107.8 377 35.0
Peaxi162Scf00121g01412 Petunia axillaris HOM05D012094 ORTHO05D011876 2.3e-21 107.5 204 39.2
Duzib235G1088 Durio zibethinus HOM05D009852 ORTHO05D009761 3.0e-21 107.1 426 33.6
MSTRG.7455 Avicennia marina HOM05D012266 ORTHO05D011876 4.0e-21 106.7 376 32.2
Gohir.D05G154000 Gossypium hirsutum HOM05D009852 ORTHO05D009761 5.2e-21 106.3 348 36.2
Solyc02g071320.4 Solanum lycopersicum HOM05D012094 ORTHO05D011876 3.3e-20 103.6 375 33.1
CANSAT35G0309 Cannabis sativa HOM05D009013 ORTHO05D009761 1.7e-19 101.3 346 30.6
EL10Ac8g19799 Beta vulgaris HOM05D018558 ORTHO05D018254 2.8e-19 100.5 373 32.2
Lalb_Chr23g0275971 Lupinus albus HOM05D009013 ORTHO05D009761 2.8e-19 100.5 376 30.3
Sopen03g001860 Solanum pennellii HOM05D012094 ORTHO05D011876 6.3e-19 99.4 350 30.6
Sabra11G0072300 Salix brachista HOM05D009852 ORTHO05D009761 8.2e-19 99.0 418 32.8
Gohir.A06G135400 Gossypium hirsutum HOM05D009852 ORTHO05D009761 1.4e-18 98.2 280 37.5
Lalb_Chr13g0295461 Lupinus albus HOM05D009013 ORTHO05D009761 1.4e-18 98.2 376 30.3
VMungo0251G0903 Vigna mungo HOM05D009013 ORTHO05D009761 1.4e-18 98.2 378 30.4
MD10G1268000 Malus domestica HOM05D014736 ORTHO05D009761 9.1e-18 95.5 283 37.5
COL.COLO4_22804 Corchorus olitorius HOM05D009852 ORTHO05D009761 2.7e-17 94.0 346 29.8
Phvul.002G244200 Phaseolus vulgaris HOM05D009013 ORTHO05D009761 3.5e-17 93.6 375 30.1
Nitab4.5_0000206g0120 Nicotiana tabacum HOM05D012094 ORTHO05D011876 1.7e-16 91.3 176 38.6
ClCG03G007220 Citrullus lanatus HOM05D025335 ORTHO05D025087 2.2e-16 90.9 380 29.7
Gohir.A05G151600 Gossypium hirsutum HOM05D009852 ORTHO05D009761 2.9e-16 90.5 349 35.0
MSTRG.13241 Avicennia marina HOM05D012266 ORTHO05D011876 1.9e-15 87.8 317 33.8
MELO3C002700.2 Cucumis melo HOM05D025335 ORTHO05D025087 2.5e-15 87.4 373 28.7
Sabra16G0233200 Salix brachista HOM05D009852 ORTHO05D009761 3.2e-15 87.0 353 28.9
MD05G1292200 Malus domestica HOM05D014736 ORTHO05D009761 5.5e-15 86.3 170 39.4
ECA248G0823 Erigeron canadensis HOM05D038653 ORTHO05D020580 3.6e-14 83.6 372 28.8
FAN11G2258 Fragaria x ananassa HOM05D014736 ORTHO05D009761 6.1e-14 82.8 190 34.7
CsaV3_6G051330 Cucumis sativus L. HOM05D022667 ORTHO05D009761 1.0e-13 82.0 373 29.8
CsaV3_1G032810 Cucumis sativus L. HOM05D025335 ORTHO05D025087 1.8e-13 81.3 374 27.8
FvH4_3g06440 Fragaria vesca HOM05D014736 ORTHO05D009761 1.8e-13 81.3 190 34.7
MELO3C007172.2 Cucumis melo HOM05D022667 ORTHO05D009761 8.8e-13 79.0 373 29.0
Psat1g018200 Pisum sativum HOM05D009013 ORTHO05D009761 2.0e-12 77.8 378 28.6
Lalb_Chr08g0233301 Lupinus albus HOM05D009013 ORTHO05D009761 2.6e-12 77.4 375 28.0
Sed0006555 Sechium edule HOM05D022667 ORTHO05D009761 2.6e-12 77.4 376 32.2
Sed0021783 Sechium edule HOM05D025335 ORTHO05D025087 7.5e-12 75.9 374 31.3
AUR62035804 Chenopodium quinoa HOM05D018558 ORTHO05D018254 1.3e-11 75.1 371 32.3
Nitab4.5_0001826g0030 Nicotiana tabacum HOM05D012094 ORTHO05D011876 1.7e-11 74.7 207 33.3
TPR.G22001 Trifolium pratense HOM05D009013 ORTHO05D009761 2.2e-11 74.3 349 29.2
Hund21471 Selenicereus undatus HOM05D018558 ORTHO05D018254 4.8e-11 73.2 348 30.7
arahy.Tifrunner.gnm1.ann1.5V604V Arachis hypogaea HOM05D009013 ORTHO05D009761 6.3e-11 72.8 378 29.4
ClCG01G024180 Citrullus lanatus HOM05D022667 ORTHO05D009761 8.3e-11 72.4 377 29.4
FAN21G2246 Fragaria x ananassa HOM05D014736 ORTHO05D009761 1.4e-10 71.6 398 32.2
TAR626G1306 Trochodendron aralioides HOM05D041535 ORTHO05D030214 1.8e-10 71.2 348 27.3
Eucgr.D00345 Eucalyptus grandis HOM05D014736 ORTHO05D009761 2.4e-10 70.9 139 41.7
Glyma.13G051300 Glycine max HOM05D009013 ORTHO05D009761 2.4e-10 70.9 48 68.8
arahy.Tifrunner.gnm1.ann1.3YWF5K Arachis hypogaea HOM05D009013 ORTHO05D009761 3.1e-10 70.5 378 28.0
TPR.G31355 Trifolium pratense HOM05D009013 ORTHO05D009761 1.2e-09 68.6 379 27.7
Peaxi162Scf00649g00008 Petunia axillaris HOM05D012094 ORTHO05D011876 1.6e-09 68.2 329 35.3
TAR627G0709 Trochodendron aralioides HOM05D041535 ORTHO05D030214 2.0e-09 67.8 325 29.2
RcHm_v2.0_Chr5g0012861 Rosa chinensis HOM05D014736 ORTHO05D009761 2.7e-09 67.4 241 29.9
Migut.M00961 Erythranthe guttata HOM05D012266 ORTHO05D011876 2.3e-08 64.3 106 38.7
Dinv00978 Davidia involucrata HOM05D021637 ORTHO05D023291 3.8e-08 63.5 259 26.3
SalBow7G0495 Salvia bowleyana HOM05D012266 ORTHO05D011876 3.8e-08 63.5 344 28.5
Medtr6g068870 Medicago truncatula HOM05D009013 ORTHO05D009761 6.6e-08 62.8 372 26.3
PSO675G7770 Papaver somniferum HOM05D022831 ORTHO05D023597 1.1e-07 62.0 120 35.0
QL08p044079 Quercus lobata HOM05D035806 ORTHO05D011736 2.5e-07 60.8 223 28.7
SalBow8G3146 Salvia bowleyana HOM05D012266 ORTHO05D011876 2.5e-07 60.8 375 28.8
Lj2P312T32 Lonicera japonica HOM05D009013 ORTHO05D009761 3.3e-07 60.5 230 30.9
Peaxi162Scf00653g00416 Petunia axillaris HOM05D012094 ORTHO05D011876 3.3e-07 60.5 97 44.3
PSO541G1916 Papaver somniferum HOM05D022831 ORTHO05D023597 9.5e-07 58.9 120 34.2
Sed0023686 Sechium edule HOM05D022667 ORTHO05D009761 1.2e-06 58.5 98 42.9
Duzib187G0630 Durio zibethinus HOM05D015707 ORTHO05D011736 1.6e-06 58.2 132 30.3
FAN25G1841 Fragaria x ananassa HOM05D014736 ORTHO05D009761 1.6e-06 58.2 420 29.3
SGA_v2.0_scaffold333G49024 Striga asiatica HOM05D012266 ORTHO05D011876 3.6e-06 57.0 133 38.3
Psat1g020440 Pisum sativum HOM05D009013 ORTHO05D009761 6.1e-06 56.2 263 30.4


User provided reference genes

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