Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv03501 Davidia involucrata HOM05D006168 ORTHO05D007602 3.9e-79 298.1 157 100.0
Dinv03506 Davidia involucrata HOM05D006168 ORTHO05D007602 3.9e-79 298.1 157 100.0
ECA238G2000 Erigeron canadensis HOM05D006168 ORTHO05D007602 3.7e-53 211.8 148 76.4
Prupe.5G244900 Prunus persica HOM05D006168 ORTHO05D007602 3.7e-53 211.8 157 73.2
Nn3g18550 Nelumbo nucifera HOM05D006168 ORTHO05D007602 1.1e-52 210.3 152 76.3
GSVIVG01024249001 Vitis vinifera HOM05D006168 ORTHO05D007602 1.1e-52 210.3 157 75.2
CiPaw.16G075600 Carya illinoinensis HOM05D006168 ORTHO05D007602 6.9e-52 207.6 157 73.9
Rhsim12G0137000 Rhododendron simsii HOM05D006168 ORTHO05D007602 6.9e-52 207.6 136 80.9
Thecc.10G078900 Theobroma cacao HOM05D006168 ORTHO05D007602 2.6e-51 205.7 157 72.6
Duzib128G1786 Durio zibethinus HOM05D006168 ORTHO05D007602 7.7e-51 204.1 158 70.9
Duzib114G0883 Durio zibethinus HOM05D006168 ORTHO05D007602 1.7e-50 203.0 157 70.1
Hund08905 Selenicereus undatus HOM05D006168 ORTHO05D007602 1.1e-49 200.3 150 70.7
QL10p033704 Quercus lobata HOM05D006168 ORTHO05D007602 2.5e-49 199.1 207 56.5
CDE04G1298 Ceratophyllum demersum HOM05D006168 ORTHO05D007602 3.2e-49 198.7 149 73.8
Gohir.A05G294800 Gossypium hirsutum HOM05D006168 ORTHO05D007602 3.2e-49 198.7 157 70.1
Cfa017805 Carpinus fangiana HOM05D006168 ORTHO05D007602 4.2e-49 198.4 151 70.9
Sabra04G0045100 Salix brachista HOM05D006168 ORTHO05D007602 4.2e-49 198.4 154 70.8
Gohir.D05G295400 Gossypium hirsutum HOM05D006168 ORTHO05D007602 7.2e-49 197.6 157 70.1
TAR629G1867 Trochodendron aralioides HOM05D006168 ORTHO05D007602 7.2e-49 197.6 153 71.9
MD06G1240400 Malus domestica HOM05D006168 ORTHO05D007602 9.4e-49 197.2 155 70.3
COL.COLO4_12167 Corchorus olitorius HOM05D006168 ORTHO05D007602 1.2e-48 196.8 157 70.1
Potri.004G067300 Populus trichocarpa HOM05D006168 ORTHO05D007602 1.2e-48 196.8 154 70.8
Lsat_1_v5_gn_2_6441 Lactuca sativa HOM05D006168 ORTHO05D007602 1.6e-48 196.4 149 73.2
Atru.chr9.17 Acer truncatum HOM05D006168 ORTHO05D007602 1.0e-47 193.7 161 70.2
Ah.14g084700 Amaranthus hybridus HOM05D006168 ORTHO05D007602 1.0e-47 193.7 157 68.2
ECA238G0114 Erigeron canadensis HOM05D006168 ORTHO05D007602 1.8e-47 193.0 134 74.6
ECA238G1897 Erigeron canadensis HOM05D006168 ORTHO05D007602 1.8e-47 193.0 134 74.6
ECA238G2968 Erigeron canadensis HOM05D000092 ORTHO05D000042 1.8e-47 193.0 133 75.2
HanXRQChr14g0428251 Helianthus annuus HOM05D006168 ORTHO05D007602 1.8e-47 193.0 155 70.3
RcHm_v2.0_Chr7g0176961 Rosa chinensis HOM05D006168 ORTHO05D007602 1.8e-47 193.0 161 68.3
MELO3C002180.2 Cucumis melo HOM05D006168 ORTHO05D007602 2.3e-47 192.6 156 69.9
vmacro16399 Vaccinium macrocarpon HOM05D006168 ORTHO05D007602 2.3e-47 192.6 167 65.3
CsaV3_1G007610 Cucumis sativus L. HOM05D006168 ORTHO05D007602 3.9e-47 191.8 156 68.6
Sed0019180 Sechium edule HOM05D006168 ORTHO05D007602 3.9e-47 191.8 156 68.6
AUR62028326 Chenopodium quinoa HOM05D006168 ORTHO05D007602 6.7e-47 191.0 151 68.9
FvH4_5g18550 Fragaria vesca HOM05D006168 ORTHO05D007602 6.7e-47 191.0 165 66.7
FAN18G0639 Fragaria x ananassa HOM05D006168 ORTHO05D007602 8.8e-47 190.7 165 66.7
Peaxi162Scf00643g00537 Petunia axillaris HOM05D006168 ORTHO05D007602 1.5e-46 189.9 152 67.1
ClCG01G014720 Citrullus lanatus HOM05D006168 ORTHO05D007602 2.0e-46 189.5 156 67.9
CANSAT35G1332 Cannabis sativa HOM05D006168 ORTHO05D007602 4.4e-46 188.3 150 70.7
CDE08G0644 Ceratophyllum demersum HOM05D006168 ORTHO05D007602 5.7e-46 188.0 151 70.2
EL10Ac8g18962 Beta vulgaris HOM05D006168 ORTHO05D007602 7.4e-46 187.6 147 67.3
FAN04G0186 Fragaria x ananassa HOM05D006168 ORTHO05D007602 7.4e-46 187.6 164 66.5
MBI06_g12548_MAGBIO Magnolia biondii HOM05D006168 ORTHO05D007602 7.4e-46 187.6 146 69.9
MD14G1246600 Malus domestica HOM05D006168 ORTHO05D007602 7.4e-46 187.6 157 67.5
Aqoxy2G03978 Aquilegia oxysepala HOM05D006168 ORTHO05D007602 1.3e-45 186.8 156 66.0
Gorai.009G312100 Gossypium raimondii HOM05D006168 ORTHO05D007602 1.3e-45 186.8 141 72.3
DCAR_011406 Daucus carota HOM05D006168 ORTHO05D007602 4.8e-45 184.9 139 73.4
PGSC0003DMG400027059 Solanum tuberosum HOM05D006168 ORTHO05D007602 4.8e-45 184.9 155 67.1
Manes.02G226600 Manihot esculenta HOM05D006168 ORTHO05D007602 8.2e-45 184.1 150 66.7
AUR62025335 Chenopodium quinoa HOM05D006168 ORTHO05D007602 1.8e-44 183.0 136 71.3
Solyc06g072170.2 Solanum lycopersicum HOM05D006168 ORTHO05D007602 1.8e-44 183.0 155 67.1
Sopen06g028470 Solanum pennellii HOM05D006168 ORTHO05D007602 1.8e-44 183.0 155 67.1
TWI81G0790 Tripterygium wilfordii HOM05D006168 ORTHO05D007602 2.4e-44 182.6 157 67.5
FAN08G3581 Fragaria x ananassa HOM05D006168 ORTHO05D007602 6.9e-44 181.0 164 64.6
Lj5g0014337 Lotus japonicus HOM05D006168 ORTHO05D007602 1.5e-43 179.9 164 63.4
CSS0046866 Camellia sinensis var. sinensis HOM05D006168 ORTHO05D007602 2.2e-42 176.0 99 88.9
PGR083G1429 Punica granatum HOM05D006168 ORTHO05D007602 3.8e-42 175.3 160 61.9
Cc02_g29290 Coffea canephora HOM05D006168 ORTHO05D007602 6.5e-42 174.5 171 59.1
Migut.D02066 Erythranthe guttata HOM05D006168 ORTHO05D007602 6.5e-42 174.5 161 60.9
ATR0124G011 Amborella trichopoda HOM05D006168 ORTHO05D007602 5.5e-41 171.4 143 66.4
Eucgr.H00657 Eucalyptus grandis HOM05D006168 ORTHO05D007602 5.5e-41 171.4 152 62.5
MSTRG.4316 Avicennia marina HOM05D006168 ORTHO05D007602 9.4e-41 170.6 153 64.1
Ca_09928_v3 Cicer arietinum L. HOM05D006168 ORTHO05D007602 2.1e-40 169.5 170 61.8
Phvul.L006301 Phaseolus vulgaris HOM05D006168 ORTHO05D007602 2.7e-40 169.1 157 60.5
Glyma.10G174000 Glycine max HOM05D006168 ORTHO05D007602 3.6e-40 168.7 154 63.6
Medtr1g077570 Medicago truncatula HOM05D006168 ORTHO05D007602 3.6e-40 168.7 171 60.8
Glyma.20G216400 Glycine max HOM05D006168 ORTHO05D007602 6.1e-40 167.9 158 61.4
SGA_v2.0_scaffold387G50509 Striga asiatica HOM05D006168 ORTHO05D007602 6.1e-40 167.9 154 62.3
VMungo0720G1915 Vigna mungo HOM05D006168 ORTHO05D007602 5.2e-39 164.9 157 59.2
PSO063G5228 Papaver somniferum HOM05D006168 ORTHO05D007602 8.8e-39 164.1 151 62.9
BraA03t12572Z Brassica rapa HOM05D006168 ORTHO05D007602 1.5e-38 163.3 149 61.7
BolC3t16418H Brassica oleracea HOM05D006168 ORTHO05D007602 2.0e-38 162.9 149 61.1
CARHR079400 Cardamine hirsuta HOM05D006168 ORTHO05D007602 3.3e-38 162.2 151 64.9
Psat6g054520 Pisum sativum HOM05D006168 ORTHO05D007602 5.7e-38 161.4 167 56.9
Aa31LG5G15370 Aethionema arabicum HOM05D006168 ORTHO05D007602 9.7e-38 160.6 150 60.7
Lalb_Chr21g0311691 Lupinus albus HOM05D006168 ORTHO05D007602 3.7e-37 158.7 154 59.7
Sp3g03900 Schrenkiella parvula HOM05D006168 ORTHO05D007602 1.1e-36 157.1 150 59.3
unitig_21.g20432 Utricularia gibba HOM05D006168 ORTHO05D007602 1.1e-36 157.1 166 54.8
HPP92_020852 Vanilla planifolia HOM05D006168 ORTHO05D007602 1.4e-36 156.8 147 63.3
Thhalv10021722m.g Eutrema salsugineum HOM05D006168 ORTHO05D007602 2.6e-35 152.5 150 58.0
AL3G15460 Arabidopsis lyrata HOM05D006168 ORTHO05D007602 5.9e-35 151.4 150 58.0
CAN.G65.65 Capsicum annuum HOM05D006168 ORTHO05D007602 5.9e-35 151.4 99 73.7
THA.LOC104818656 Tarenaya hassleriana HOM05D006168 ORTHO05D007602 3.8e-34 148.7 149 59.1
Ciclev10022597m.g Citrus clementina HOM05D006168 ORTHO05D007602 8.5e-34 147.5 161 54.7
AT3G05070 Arabidopsis thaliana HOM05D006168 ORTHO05D007602 1.1e-33 147.1 150 56.7
Carub.0003s0432 Capsella rubella HOM05D006168 ORTHO05D007602 1.9e-33 146.4 155 53.5
RcHm_v2.0_Chr5g0006211 Rosa chinensis HOM05D006168 ORTHO05D007602 7.2e-33 144.4 155 52.9
Oeu034422.1 Olea europaea HOM05D006168 ORTHO05D007602 1.6e-32 143.3 138 60.1
A05p42500 Brassica napus HOM05D006168 ORTHO05D007602 6.1e-32 141.4 149 55.0
BraA05t23002Z Brassica rapa HOM05D006168 ORTHO05D007602 6.1e-32 141.4 149 55.0
C05p62160 Brassica napus HOM05D006168 ORTHO05D007602 1.0e-31 140.6 149 55.0
BolC5t34874H Brassica oleracea HOM05D006168 ORTHO05D007602 1.0e-31 140.6 149 55.0
Haze_18408 Corylus avellana HOM05D006168 ORTHO05D007602 1.4e-31 140.2 96 71.9
SEGI_05677 Sequoiadendron giganteum HOM05D006168 ORTHO05D007602 5.2e-31 138.3 161 50.3
SalBow8G4549 Salvia bowleyana HOM05D006168 ORTHO05D007602 6.7e-31 137.9 153 56.9
Os06g0730800 Oryza sativa ssp. japonica HOM05D006168 ORTHO05D007602 9.7e-30 134.0 181 46.4
Zm00001eb228960 Zea mays HOM05D006168 ORTHO05D007602 3.1e-28 129.0 171 45.0
AagrBONN_evm.TU.Sc2ySwM_368.389 Anthoceros agrestis HOM05D006168 ORTHO05D007602 4.1e-28 128.6 141 53.9
Nitab4.5_0000477g0160 Nicotiana tabacum HOM05D006168 ORTHO05D007602 9.1e-28 127.5 104 64.4
Pp3c19_22150 Physcomitrium patens HOM05D006168 ORTHO05D007602 2.7e-27 125.9 149 50.3
BcaC05g29992 Brassica carinata HOM05D006168 ORTHO05D007602 7.7e-27 124.4 149 49.0
FAN25G2877 Fragaria x ananassa HOM05D006168 ORTHO05D007602 2.2e-26 122.9 147 47.6
FAN21G2556 Fragaria x ananassa HOM05D006168 ORTHO05D007602 6.5e-26 121.3 147 48.3
FAN11G1802 Fragaria x ananassa HOM05D006168 ORTHO05D007602 1.1e-25 120.6 145 48.3
Nitab4.5_0002771g0020 Nicotiana tabacum HOM05D006168 ORTHO05D007602 1.1e-25 120.6 84 71.4
FvH4_3g03920 Fragaria vesca HOM05D006168 ORTHO05D007602 1.5e-25 120.2 145 48.3
FAN16G2203 Fragaria x ananassa HOM05D006168 ORTHO05D007602 3.2e-25 119.0 148 47.3
SMO147G0110 Selaginella moellendorffii HOM05D006168 ORTHO05D007602 2.1e-24 116.3 141 51.8
arahy.Tifrunner.gnm1.ann1.52MA05 Arachis hypogaea HOM05D006168 ORTHO05D007602 2.7e-24 115.9 148 50.7
Sed0015845 Sechium edule HOM05D006168 ORTHO05D007602 4.0e-23 112.1 148 50.0
Sc15g0000010 Simmondsia chinensis HOM05D006168 ORTHO05D007602 6.8e-23 111.3 99 65.7
BcaB04g19282 Brassica carinata HOM05D006168 ORTHO05D007602 2.6e-22 109.4 84 69.0
FAN13G0455 Fragaria x ananassa HOM05D006168 ORTHO05D007602 4.4e-22 108.6 105 59.0
Mapoly0133s0024 Marchantia polymorpha HOM05D006168 ORTHO05D007602 7.5e-22 107.8 137 48.2
Potri.017G154100 Populus trichocarpa HOM05D006168 ORTHO05D007602 1.8e-20 103.2 100 58.0
TPR.G8871 Trifolium pratense HOM05D006168 ORTHO05D007602 5.5e-17 91.7 60 83.3
CBR_g57849 Chara braunii HOM05D006168 ORTHO05D007602 2.1e-16 89.7 157 40.1
BcaC01g04336 Brassica carinata HOM05D006168 ORTHO05D007602 1.4e-15 87.0 113 47.8
arahy.Tifrunner.gnm1.ann1.S1M3RU Arachis hypogaea HOM05D006168 ORTHO05D007602 4.0e-15 85.5 123 44.7
TPR.G35595 Trifolium pratense HOM05D006168 ORTHO05D007602 1.2e-14 84.0 105 50.5
Cre12.g518300 Chlamydomonas reinhardtii HOM05D006168 ORTHO05D007602 1.7e-13 80.1 147 41.5
Haze_01753 Corylus avellana HOM05D006168 ORTHO05D007602 1.5e-09 67.0 53 69.8
Cpa.g.sc117.34 Carica papaya HOM05D006168 ORTHO05D007602 2.8e-08 62.8 52 65.4
MCO12G027 Micromonas commoda HOM05D006168 ORTHO05D007602 4.7e-08 62.0 131 34.4
C03p41350 Brassica napus HOM05D006168 ORTHO05D007602 1.5e-06 57.0 113 41.6
ECA238G2216 Erigeron canadensis HOM05D006168 ORTHO05D007602 2.0e-06 56.6 122 34.4


User provided reference genes

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