Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv03287 Davidia involucrata HOM05D004415 ORTHO05D005198 7.3e-167 590.5 301 100.0
Hma1.2p1_0008F-2.1_g005810 Hydrangea macrophylla HOM05D004415 ORTHO05D005198 1.0e-144 516.9 303 87.8
Actinidia29247 Actinidia chinensis HOM05D004415 ORTHO05D005198 2.6e-140 502.3 301 85.4
GSVIVG01037942001 Vitis vinifera HOM05D004415 ORTHO05D005198 1.3e-139 500.0 300 86.3
vmacro03476 Vaccinium macrocarpon HOM05D004415 ORTHO05D005198 1.9e-138 496.1 301 85.4
Rhsim13G0126400 Rhododendron simsii HOM05D004415 ORTHO05D005198 2.4e-138 495.7 301 85.7
Cfa000755 Carpinus fangiana HOM05D004415 ORTHO05D005198 7.1e-138 494.2 302 85.1
Thecc.06G005600 Theobroma cacao HOM05D004415 ORTHO05D005198 1.2e-137 493.4 301 84.1
CiPaw.09G149000 Carya illinoinensis HOM05D004415 ORTHO05D005198 2.7e-137 492.3 301 83.4
Lj1A1155G52 Lonicera japonica HOM05D004415 ORTHO05D005198 1.0e-136 490.3 301 83.4
Ciclev10016110m.g Citrus clementina HOM05D004415 ORTHO05D005198 1.3e-136 490.0 302 83.1
CSS0002194 Camellia sinensis var. sinensis HOM05D004415 ORTHO05D005198 2.3e-136 489.2 302 84.1
TAR627G0414 Trochodendron aralioides HOM05D004415 ORTHO05D005198 3.0e-136 488.8 303 82.2
TAR627G1150 Trochodendron aralioides HOM05D004415 ORTHO05D005198 3.0e-136 488.8 303 82.2
CSS0048897 Camellia sinensis var. sinensis HOM05D004415 ORTHO05D005198 9.6e-135 483.8 302 82.8
Nn7g37839 Nelumbo nucifera HOM05D004415 ORTHO05D005198 2.8e-134 482.3 302 79.8
Oeu063146.1 Olea europaea HOM05D004415 ORTHO05D005198 1.1e-133 480.3 301 80.7
Sc17g0004090 Simmondsia chinensis HOM05D004415 ORTHO05D005198 5.3e-133 478.0 302 81.5
RcHm_v2.0_Chr5g0018471 Rosa chinensis HOM05D004415 ORTHO05D005198 9.0e-133 477.2 302 79.1
QL05p063115 Quercus lobata HOM05D004415 ORTHO05D005198 1.2e-132 476.9 341 74.5
FvH4_3g11520 Fragaria vesca HOM05D004415 ORTHO05D005198 2.0e-132 476.1 302 78.8
Potri.011G155200 Populus trichocarpa HOM05D004415 ORTHO05D005198 2.6e-132 475.7 302 80.5
Duzib235G0717 Durio zibethinus HOM05D004415 ORTHO05D005198 3.4e-132 475.3 302 81.5
MSTRG.16315 Avicennia marina HOM05D004415 ORTHO05D005198 4.5e-132 474.9 302 80.5
CSS0010489 Camellia sinensis var. sinensis HOM05D004415 ORTHO05D005198 4.5e-132 474.9 287 85.4
TWI38G1449 Tripterygium wilfordii HOM05D004415 ORTHO05D005198 5.8e-132 474.6 302 80.8
Ca_02386_v3 Cicer arietinum L. HOM05D004415 ORTHO05D005198 9.9e-132 473.8 302 80.5
Migut.M01938 Erythranthe guttata HOM05D004415 ORTHO05D005198 9.9e-132 473.8 302 80.1
SalBow8G0313 Salvia bowleyana HOM05D004415 ORTHO05D005198 9.9e-132 473.8 298 79.2
SalBow8G4844 Salvia bowleyana HOM05D004415 ORTHO05D005198 9.9e-132 473.8 298 79.2
Atru.chr10.660 Acer truncatum HOM05D004415 ORTHO05D005198 1.3e-131 473.4 301 79.1
Manes.16G062800 Manihot esculenta HOM05D004415 ORTHO05D005198 1.7e-131 473.0 301 81.1
Phvul.009G218500 Phaseolus vulgaris HOM05D004415 ORTHO05D005198 2.9e-131 472.2 303 78.5
Potri.001G440600 Populus trichocarpa HOM05D004415 ORTHO05D005198 2.9e-131 472.2 302 79.5
CANSAT35G0835 Cannabis sativa HOM05D004415 ORTHO05D005198 6.4e-131 471.1 301 80.1
Gohir.A06G202400 Gossypium hirsutum HOM05D004415 ORTHO05D005198 6.4e-131 471.1 302 79.8
Gorai.010G247000 Gossypium raimondii HOM05D004415 ORTHO05D005198 6.4e-131 471.1 302 80.1
MD00G1097300 Malus domestica HOM05D004415 ORTHO05D005198 6.4e-131 471.1 302 79.1
Prupe.4G102500 Prunus persica HOM05D004415 ORTHO05D005198 8.4e-131 470.7 301 80.7
PGR083G0443 Punica granatum HOM05D004415 ORTHO05D005198 1.4e-130 469.9 303 78.9
Lalb_Chr11g0073471 Lupinus albus HOM05D004415 ORTHO05D005198 2.4e-130 469.2 302 80.1
Sabra16G0298000 Salix brachista HOM05D004415 ORTHO05D005198 5.5e-130 468.0 307 78.8
Sopen02g018770 Solanum pennellii HOM05D004415 ORTHO05D005198 5.5e-130 468.0 300 79.0
Solyc02g069640.3 Solanum lycopersicum HOM05D004415 ORTHO05D005198 7.1e-130 467.6 300 78.7
PGSC0003DMG400021134 Solanum tuberosum HOM05D004415 ORTHO05D005198 7.1e-130 467.6 300 78.7
arahy.Tifrunner.gnm1.ann1.ZSFV9B Arachis hypogaea HOM05D004415 ORTHO05D005198 1.2e-129 466.8 302 79.1
CDE03G0179 Ceratophyllum demersum HOM05D004415 ORTHO05D005198 1.2e-129 466.8 302 78.1
ClCG01G008890 Citrullus lanatus HOM05D004415 ORTHO05D005198 1.2e-129 466.8 302 80.1
VMungo1309G0873 Vigna mungo HOM05D004415 ORTHO05D005198 1.6e-129 466.5 301 78.1
Sabra16G0300000 Salix brachista HOM05D004415 ORTHO05D005198 2.1e-129 466.1 307 78.5
CDE06G2804 Ceratophyllum demersum HOM05D004415 ORTHO05D005198 2.7e-129 465.7 302 78.5
ATR1098G142 Amborella trichopoda HOM05D004415 ORTHO05D005198 3.5e-129 465.3 297 77.8
Cpa.g.sc173.46 Carica papaya HOM05D004415 ORTHO05D005198 3.5e-129 465.3 298 81.5
MSTRG.7566 Avicennia marina HOM05D004415 ORTHO05D005198 4.6e-129 464.9 301 79.1
SGA_v2.0_scaffold298G47634 Striga asiatica HOM05D004415 ORTHO05D005198 6.0e-129 464.5 302 78.5
arahy.Tifrunner.gnm1.ann1.UW0JAL Arachis hypogaea HOM05D004415 ORTHO05D005198 7.9e-129 464.2 302 79.5
FAN16G2189 Fragaria x ananassa HOM05D004415 ORTHO05D005198 1.0e-128 463.8 320 74.7
FAN21G2450 Fragaria x ananassa HOM05D004415 ORTHO05D005198 1.3e-128 463.4 320 74.4
Ah.01g002800 Amaranthus hybridus HOM05D004415 ORTHO05D005198 1.8e-128 463.0 300 79.0
Medtr2g047110 Medicago truncatula HOM05D004415 ORTHO05D005198 2.3e-128 462.6 302 78.5
FAN25G0769 Fragaria x ananassa HOM05D004415 ORTHO05D005198 3.9e-128 461.8 319 73.4
Peaxi162Scf00195g00616 Petunia axillaris HOM05D004415 ORTHO05D005198 3.9e-128 461.8 300 77.3
Hund01093 Selenicereus undatus HOM05D004415 ORTHO05D005198 5.1e-128 461.5 302 78.8
COL.COLO4_22898 Corchorus olitorius HOM05D004415 ORTHO05D005198 1.9e-127 459.5 303 79.5
CsaV3_1G037760 Cucumis sativus L. HOM05D004415 ORTHO05D005198 2.5e-127 459.1 302 78.8
Sed0021762 Sechium edule HOM05D004415 ORTHO05D005198 2.5e-127 459.1 303 79.9
Nitab4.5_0010415g0030 Nicotiana tabacum HOM05D004415 ORTHO05D005198 1.1e-125 453.8 300 77.3
unitig_37.g12064 Utricularia gibba HOM05D004415 ORTHO05D005198 1.1e-125 453.8 302 78.1
Lalb_Chr08g0233111 Lupinus albus HOM05D004415 ORTHO05D005198 1.8e-125 453.0 302 75.5
Aqoxy4G00050 Aquilegia oxysepala HOM05D004415 ORTHO05D005198 3.1e-125 452.2 297 75.8
Glyma.15G191200 Glycine max HOM05D004415 ORTHO05D005198 1.2e-124 450.3 302 75.5
HPP92_013188 Vanilla planifolia HOM05D004415 ORTHO05D005198 1.5e-124 449.9 301 75.4
Nitab4.5_0007613g0030 Nicotiana tabacum HOM05D004415 ORTHO05D005198 3.4e-124 448.7 300 76.3
Glyma.09G083100 Glycine max HOM05D004415 ORTHO05D005198 1.3e-123 446.8 301 76.1
TPR.G22904 Trifolium pratense HOM05D004415 ORTHO05D005198 1.7e-123 446.4 297 76.4
Ca_17811_v3 Cicer arietinum L. HOM05D004415 ORTHO05D005198 4.9e-123 444.9 304 75.0
ECA236G1935 Erigeron canadensis HOM05D004415 ORTHO05D005198 5.5e-122 441.4 301 74.1
PSO675G6508 Papaver somniferum HOM05D004415 ORTHO05D005198 1.6e-121 439.9 303 75.2
Medtr8g089250 Medicago truncatula HOM05D004415 ORTHO05D005198 2.7e-121 439.1 302 73.8
PSO541G2694 Papaver somniferum HOM05D004415 ORTHO05D005198 2.7e-121 439.1 303 75.2
Psat1g018760 Pisum sativum HOM05D004415 ORTHO05D005198 6.0e-121 438.0 302 74.5
CAN.G954.7 Capsicum annuum HOM05D004415 ORTHO05D005198 1.0e-120 437.2 286 77.6
AUR62025006 Chenopodium quinoa HOM05D004415 ORTHO05D005198 1.0e-120 437.2 302 75.8
Sabra11G0144600 Salix brachista HOM05D004415 ORTHO05D005198 1.8e-120 436.4 279 79.2
Lalb_Chr07g0185681 Lupinus albus HOM05D004415 ORTHO05D005198 5.1e-120 434.9 287 77.4
Eucgr.D01029 Eucalyptus grandis HOM05D004415 ORTHO05D005198 6.7e-120 434.5 267 83.1
AUR62006530 Chenopodium quinoa HOM05D004415 ORTHO05D005198 1.5e-119 433.3 302 74.8
Thhalv10025893m.g Eutrema salsugineum HOM05D004415 ORTHO05D005198 1.5e-119 433.3 298 74.5
THA.LOC104812930 Tarenaya hassleriana HOM05D004415 ORTHO05D005198 1.5e-119 433.3 298 73.2
AT4G20410 Arabidopsis thaliana HOM05D004415 ORTHO05D005198 4.3e-119 431.8 298 73.2
Sp7g18770 Schrenkiella parvula HOM05D004415 ORTHO05D005198 4.3e-119 431.8 298 73.8
AL7G33480 Arabidopsis lyrata HOM05D004415 ORTHO05D005198 5.7e-119 431.4 298 73.5
Gorai.009G116300 Gossypium raimondii HOM05D004415 ORTHO05D005198 7.4e-119 431.0 300 74.3
EL10Ac9g22486 Beta vulgaris HOM05D004415 ORTHO05D005198 9.7e-119 430.6 294 74.8
TPR.G6264 Trifolium pratense HOM05D004415 ORTHO05D005198 9.7e-119 430.6 303 72.9
Carub.0007s2075 Capsella rubella HOM05D004415 ORTHO05D005198 1.3e-118 430.3 298 73.2
Os04g0618500 Oryza sativa ssp. japonica HOM05D004415 ORTHO05D005198 2.8e-118 429.1 301 71.8
CARHR227240 Cardamine hirsuta HOM05D004415 ORTHO05D005198 4.8e-118 428.3 298 73.2
arahy.Tifrunner.gnm1.ann1.Z0R64B Arachis hypogaea HOM05D004415 ORTHO05D005198 1.4e-117 426.8 302 72.5
C01p14410 Brassica napus HOM05D004415 ORTHO05D005198 1.4e-117 426.8 298 72.8
BolC1t01398H Brassica oleracea HOM05D004415 ORTHO05D005198 1.4e-117 426.8 298 72.8
Sed0009944 Sechium edule HOM05D004415 ORTHO05D005198 2.4e-117 426.0 282 78.7
arahy.Tifrunner.gnm1.ann1.5MZ6ZS Arachis hypogaea HOM05D004415 ORTHO05D005198 4.1e-117 425.2 302 72.5
A01p12100 Brassica napus HOM05D004415 ORTHO05D005198 1.5e-116 423.3 298 72.1
BraA01t01153Z Brassica rapa HOM05D004415 ORTHO05D005198 2.2e-115 419.5 298 71.8
Gohir.D06G219300 Gossypium hirsutum HOM05D004415 ORTHO05D005198 7.2e-114 414.5 255 82.0
Lsat_1_v5_gn_7_31101 Lactuca sativa HOM05D004415 ORTHO05D005198 7.9e-113 411.0 301 70.8
Aa31LG6G2800 Aethionema arabicum HOM05D004415 ORTHO05D005198 6.7e-112 407.9 298 70.5
Hma1.2p1_0008F-2.1_g005800 Hydrangea macrophylla HOM05D004415 ORTHO05D005198 4.8e-110 401.7 219 91.3
Haze_05963 Corylus avellana HOM05D004415 ORTHO05D005198 7.7e-108 394.4 302 71.9
Gohir.D05G112100 Gossypium hirsutum HOM05D004415 ORTHO05D005198 1.4e-106 390.2 325 65.2
Cc09_g04060 Coffea canephora HOM05D004415 ORTHO05D005198 7.2e-98 361.3 227 81.1
AagrBONN_evm.TU.Sc2ySwM_368.1346 Anthoceros agrestis HOM05D004415 ORTHO05D005198 6.1e-97 358.2 295 59.3
Lj6g0004921 Lotus japonicus HOM05D004415 ORTHO05D005198 1.1e-95 354.0 301 62.8
HanXRQChr04g0119541 Helianthus annuus HOM05D004415 ORTHO05D005198 2.4e-93 346.3 227 77.5
MELO3C021810.2 Cucumis melo HOM05D004415 ORTHO05D005198 4.1e-93 345.5 228 79.4
Zm00001eb431060 Zea mays HOM05D004415 ORTHO05D005198 9.1e-93 344.4 222 76.1
Mapoly0008s0129 Marchantia polymorpha HOM05D004415 ORTHO05D005198 7.2e-90 334.7 298 57.7
SMO228G0081 Selaginella moellendorffii HOM05D004415 ORTHO05D005198 6.1e-89 331.6 267 61.8
AagrBONN_evm.TU.Sc2ySwM_362.579 Anthoceros agrestis HOM05D004415 ORTHO05D005198 2.3e-88 329.7 298 56.4
arahy.Tifrunner.gnm1.ann1.QWIY8B Arachis hypogaea HOM05D004415 ORTHO05D005198 1.2e-87 327.4 284 62.7
Pp3c19_23300 Physcomitrium patens HOM05D004415 ORTHO05D005198 1.5e-87 327.0 294 58.5
CDE03G0221 Ceratophyllum demersum HOM05D004415 ORTHO05D005198 7.5e-87 324.7 280 64.6
AagrBONN_evm.TU.Sc2ySwM_368.3355 Anthoceros agrestis HOM05D004415 ORTHO05D005198 9.7e-87 324.3 298 55.4
CBR_g24190 Chara braunii HOM05D004415 ORTHO05D005198 2.9e-83 312.8 300 56.3
Zm00001eb410240 Zea mays HOM05D004415 ORTHO05D005198 1.1e-82 310.8 225 69.3
Duzib043G0003 Durio zibethinus HOM05D004415 ORTHO05D005198 2.8e-73 279.6 180 80.0
CBR_g48904 Chara braunii HOM05D004415 ORTHO05D005198 8.9e-72 274.6 261 55.6
arahy.Tifrunner.gnm1.ann1.09GK0V Arachis hypogaea HOM05D004415 ORTHO05D005198 6.3e-70 268.5 257 58.4
MBI02_g43828_MAGBIO Magnolia biondii HOM05D004415 ORTHO05D005198 6.1e-65 251.9 150 85.3
arahy.Tifrunner.gnm1.ann1.6K3MVX Arachis hypogaea HOM05D004415 ORTHO05D005198 6.8e-64 248.4 228 59.6
SEGI_29507 Sequoiadendron giganteum HOM05D004415 ORTHO05D005198 6.0e-60 235.3 162 69.8
Gohir.A05G111501 Gossypium hirsutum HOM05D004415 ORTHO05D005198 1.5e-58 230.7 208 63.0
arahy.Tifrunner.gnm1.ann1.W2C20P Arachis hypogaea HOM05D004415 ORTHO05D005198 3.7e-54 216.1 154 71.4
Zm00001eb072080 Zea mays HOM05D004415 ORTHO05D005198 2.4e-53 213.4 148 68.2
TAR627G0753 Trochodendron aralioides HOM05D004415 ORTHO05D005198 6.0e-52 208.8 140 75.0
Oeu063144.1 Olea europaea HOM05D004415 ORTHO05D005198 1.5e-47 194.1 181 59.1
MCO11G422 Micromonas commoda HOM05D004415 ORTHO05D005198 1.6e-44 184.1 271 38.0
arahy.Tifrunner.gnm1.ann1.NJ63RV Arachis hypogaea HOM05D004415 ORTHO05D005198 4.7e-41 172.6 145 62.1
VMungo0464G1344 Vigna mungo HOM05D004415 ORTHO05D005198 1.6e-36 157.5 110 72.7
PRCOL_00005341 Prasinoderma coloniale HOM05D004415 ORTHO05D005198 1.7e-35 154.1 307 34.9
SEGI_22365 Sequoiadendron giganteum HOM05D004415 ORTHO05D005198 3.6e-33 146.4 111 71.2
arahy.Tifrunner.gnm1.ann1.YAAB6X Arachis hypogaea HOM05D004415 ORTHO05D005198 3.8e-30 136.3 132 58.3
Zm00001eb266710 Zea mays HOM05D004415 ORTHO05D005198 3.8e-30 136.3 104 62.5
Cre08.g385700 Chlamydomonas reinhardtii HOM05D004415 ORTHO05D005198 3.4e-23 113.2 275 28.7
Cc09_g04070 Coffea canephora HOM05D004415 ORTHO05D005198 1.3e-22 111.3 64 89.1
arahy.Tifrunner.gnm1.ann1.479FYN Arachis hypogaea HOM05D004415 ORTHO05D005198 2.4e-21 107.1 116 54.3
FvH4_3g11480 Fragaria vesca HOM05D004415 ORTHO05D005198 4.2e-21 106.3 76 72.4
SGA_v2.0_scaffold298G47629 Striga asiatica HOM05D004415 ORTHO05D005198 1.6e-20 104.4 128 50.0
arahy.Tifrunner.gnm1.ann1.LII2ER Arachis hypogaea HOM05D004415 ORTHO05D005198 3.1e-16 90.1 113 47.8
arahy.Tifrunner.gnm1.ann1.8SCZ96 Arachis hypogaea HOM05D004415 ORTHO05D005198 7.6e-15 85.5 113 46.0
BcaB03g15995 Brassica carinata HOM05D004415 ORTHO05D005198 1.0e-11 75.1 106 46.2
HanXRQChr04g0119531 Helianthus annuus HOM05D004415 ORTHO05D005198 3.3e-10 70.1 52 71.2
GSVIVG01003362001 Vitis vinifera HOM05D004415 ORTHO05D005198 4.8e-09 66.2 54 61.1
VMungo0331G0484 Vigna mungo HOM05D003730 ORTHO05D005198 2.4e-08 63.9 45 64.4
SGA_v2.0_scaffold298G47630 Striga asiatica HOM05D004415 ORTHO05D005198 3.1e-08 63.5 60 56.7
GSVIVG01005645001 Vitis vinifera HOM05D004415 ORTHO05D005198 4.0e-08 63.2 60 53.3
GSVIVG01032305001 Vitis vinifera HOM05D004415 ORTHO05D005198 5.3e-08 62.8 54 57.4
VMungo0251G3417 Vigna mungo HOM05D004415 ORTHO05D005198 4.9e-06 56.2 53 54.7


User provided reference genes

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