Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv03143 Davidia involucrata HOM05D006270 ORTHO05D007755 3.5e-161 571.6 301 100.0
Actinidia23030 Actinidia chinensis HOM05D006270 ORTHO05D007755 7.0e-93 344.7 299 61.9
GSVIVG01026015001 Vitis vinifera HOM05D006270 ORTHO05D007755 8.5e-91 337.8 247 69.2
Rhsim12G0005700 Rhododendron simsii HOM05D006270 ORTHO05D007755 1.1e-90 337.4 303 61.7
vmacro00974 Vaccinium macrocarpon HOM05D006270 ORTHO05D007755 4.4e-87 325.5 310 59.0
TAR628G1531 Trochodendron aralioides HOM05D006270 ORTHO05D007755 2.4e-85 319.7 300 64.3
QL09p054436 Quercus lobata HOM05D006270 ORTHO05D007755 3.1e-85 319.3 213 72.8
QL09p054318 Quercus lobata HOM05D006270 ORTHO05D007755 9.1e-85 317.8 213 71.8
Cc10_g11640 Coffea canephora HOM05D006270 ORTHO05D007755 8.5e-83 311.2 301 56.8
Migut.C01268 Erythranthe guttata HOM05D006270 ORTHO05D007755 2.5e-82 309.7 208 72.1
MSTRG.25449 Avicennia marina HOM05D006270 ORTHO05D007755 2.1e-81 306.6 199 73.4
Haze_18335 Corylus avellana HOM05D006270 ORTHO05D007755 8.0e-81 304.7 201 72.1
ECA232G4580 Erigeron canadensis HOM05D006270 ORTHO05D007755 8.0e-81 304.7 205 71.2
Gohir.D08G172100 Gossypium hirsutum HOM05D006270 ORTHO05D007755 8.0e-81 304.7 302 58.9
Gorai.004G179400 Gossypium raimondii HOM05D006270 ORTHO05D007755 1.8e-80 303.5 302 58.6
Nitab4.5_0001579g0030 Nicotiana tabacum HOM05D006270 ORTHO05D007755 1.8e-80 303.5 215 69.8
Thecc.03G315400 Theobroma cacao HOM05D006270 ORTHO05D007755 2.3e-80 303.1 204 67.6
Duzib205G0009 Durio zibethinus HOM05D006270 ORTHO05D007755 5.2e-80 302.0 301 55.1
FAN10G0687 Fragaria x ananassa HOM05D006270 ORTHO05D007755 6.8e-80 301.6 203 72.9
Nitab4.5_0000167g0160 Nicotiana tabacum HOM05D006270 ORTHO05D007755 6.8e-80 301.6 266 60.9
HanXRQChr05g0147941 Helianthus annuus HOM05D006270 ORTHO05D007755 8.8e-80 301.2 205 68.8
Ciclev10021647m.g Citrus clementina HOM05D006270 ORTHO05D007755 1.2e-79 300.8 216 67.6
Lsat_1_v5_gn_0_7900 Lactuca sativa HOM05D006270 ORTHO05D007755 2.0e-79 300.1 200 69.5
PGSC0003DMG400014297 Solanum tuberosum HOM05D006270 ORTHO05D007755 2.0e-79 300.1 191 73.3
Cfa017859 Carpinus fangiana HOM05D006270 ORTHO05D007755 3.4e-79 299.3 201 70.1
Manes.08G135800 Manihot esculenta HOM05D006270 ORTHO05D007755 3.4e-79 299.3 302 53.6
Sopen03g004530 Solanum pennellii HOM05D006270 ORTHO05D007755 3.4e-79 299.3 191 72.8
Aqoxy6G00085 Aquilegia oxysepala HOM05D006270 ORTHO05D007755 4.4e-79 298.9 203 70.9
FAN10G3159 Fragaria x ananassa HOM05D006270 ORTHO05D007755 5.7e-79 298.5 203 72.4
FAN01G1506 Fragaria x ananassa HOM05D006270 ORTHO05D007755 9.8e-79 297.7 203 72.4
RcHm_v2.0_Chr1g0380911 Rosa chinensis HOM05D006270 ORTHO05D007755 9.8e-79 297.7 203 71.9
Solyc03g025710.3 Solanum lycopersicum HOM05D006270 ORTHO05D007755 9.8e-79 297.7 191 72.8
Gohir.A08G151000 Gossypium hirsutum HOM05D006270 ORTHO05D007755 1.3e-78 297.4 193 72.0
FAN03G2743 Fragaria x ananassa HOM05D006270 ORTHO05D007755 1.7e-78 297.0 203 72.4
FAN06G0691 Fragaria x ananassa HOM05D006270 ORTHO05D007755 1.7e-78 297.0 203 71.9
Oeu032990.1 Olea europaea HOM05D006270 ORTHO05D007755 2.8e-78 296.2 197 72.6
FAN06G0861 Fragaria x ananassa HOM05D006270 ORTHO05D007755 3.7e-78 295.8 203 71.4
TWI59G0231 Tripterygium wilfordii HOM05D006270 ORTHO05D007755 3.7e-78 295.8 192 74.0
Glyma.08G240100 Glycine max HOM05D006270 ORTHO05D007755 1.4e-77 293.9 205 68.3
Sc23g0001640 Simmondsia chinensis HOM05D006270 ORTHO05D007755 2.4e-77 293.1 209 69.9
Phvul.011G002300 Phaseolus vulgaris HOM05D006270 ORTHO05D007755 7.0e-77 291.6 206 67.0
SGA_v2.0_scaffold24G10562 Striga asiatica HOM05D006270 ORTHO05D007755 7.0e-77 291.6 198 69.7
Glyma.12G002000 Glycine max HOM05D006270 ORTHO05D007755 1.2e-76 290.8 205 67.3
VMungo1127G1589 Vigna mungo HOM05D006270 ORTHO05D007755 1.6e-76 290.4 259 58.3
Potri.005G054600 Populus trichocarpa HOM05D006270 ORTHO05D007755 3.5e-76 289.3 215 64.7
Sabra05G0047500 Salix brachista HOM05D006270 ORTHO05D007755 3.5e-76 289.3 224 64.7
Atru.chr13.2329 Acer truncatum HOM05D006270 ORTHO05D007755 5.9e-76 288.5 193 69.9
PSO782G5577 Papaver somniferum HOM05D006270 ORTHO05D007755 3.8e-75 285.8 200 69.0
SalBow7G0089 Salvia bowleyana HOM05D006270 ORTHO05D007755 5.0e-75 285.4 193 68.4
CAN.G307.5 Capsicum annuum HOM05D006270 ORTHO05D007755 8.6e-75 284.6 190 70.0
AUR62023526 Chenopodium quinoa HOM05D006270 ORTHO05D007755 3.3e-74 282.7 207 68.1
PSO170G6113 Papaver somniferum HOM05D006270 ORTHO05D007755 1.6e-73 280.4 200 68.5
Lj3g0009409 Lotus japonicus HOM05D006270 ORTHO05D007755 4.7e-73 278.9 195 70.3
EL10Ac1g00156 Beta vulgaris HOM05D006270 ORTHO05D007755 6.1e-73 278.5 247 59.1
arahy.Tifrunner.gnm1.ann1.WW5SAZ Arachis hypogaea HOM05D006270 ORTHO05D007755 1.0e-72 277.7 242 57.4
arahy.Tifrunner.gnm1.ann1.3FR1H5 Arachis hypogaea HOM05D006270 ORTHO05D007755 3.0e-72 276.2 242 57.4
Eucgr.F02983 Eucalyptus grandis HOM05D006270 ORTHO05D007755 4.4e-71 272.3 198 66.7
Peaxi162Scf01013g00026 Petunia axillaris HOM05D006270 ORTHO05D007755 5.7e-71 271.9 208 62.0
Psat7g147160 Pisum sativum HOM05D006270 ORTHO05D007755 1.7e-70 270.4 199 66.8
ATR1136G034 Amborella trichopoda HOM05D006270 ORTHO05D007755 8.3e-70 268.1 189 67.2
TPR.G27896 Trifolium pratense HOM05D006270 ORTHO05D007755 4.1e-69 265.8 210 61.0
DCAR_028408 Daucus carota HOM05D006270 ORTHO05D007755 3.5e-68 262.7 197 67.0
PGR102G0747 Punica granatum HOM05D006270 ORTHO05D007755 3.5e-68 262.7 190 70.0
CANSAT21G0664 Cannabis sativa HOM05D006270 ORTHO05D007755 1.0e-67 261.2 200 62.5
Nitab4.5_0001579g0080 Nicotiana tabacum HOM05D006270 ORTHO05D007755 1.0e-67 261.2 246 58.1
Cpa.g.sc66.22 Carica papaya HOM05D006270 ORTHO05D007755 1.7e-67 260.4 192 65.1
Lalb_Chr01g0000131 Lupinus albus HOM05D006270 ORTHO05D007755 1.7e-67 260.4 207 61.4
Nitab4.5_0000167g0150 Nicotiana tabacum HOM05D006270 ORTHO05D007755 5.0e-67 258.8 237 58.6
C06p35210 Brassica napus HOM05D006270 ORTHO05D007755 3.6e-65 252.7 192 63.0
BcaB03g15641 Brassica carinata HOM05D006270 ORTHO05D007755 4.7e-65 252.3 192 63.0
CARHR064850 Cardamine hirsuta HOM05D006270 ORTHO05D007755 6.1e-65 251.9 192 63.5
BcaC08g45741 Brassica carinata HOM05D006270 ORTHO05D007755 1.0e-64 251.1 192 63.0
BolC6t38627H Brassica oleracea HOM05D006270 ORTHO05D007755 1.0e-64 251.1 192 63.0
A07p30450 Brassica napus HOM05D006270 ORTHO05D007755 1.8e-64 250.4 192 62.5
BraA07t30681Z Brassica rapa HOM05D006270 ORTHO05D007755 2.3e-64 250.0 192 62.5
unitig_8.g2905 Utricularia gibba HOM05D006270 ORTHO05D007755 8.9e-64 248.1 192 64.1
Sp5g27100 Schrenkiella parvula HOM05D006270 ORTHO05D007755 2.0e-63 246.9 192 62.5
Thhalv10019029m.g Eutrema salsugineum HOM05D006270 ORTHO05D007755 5.8e-63 245.4 192 61.5
COL.COLO4_16875 Corchorus olitorius HOM05D006270 ORTHO05D007755 9.8e-63 244.6 155 72.9
Os07g0264800 Oryza sativa ssp. japonica HOM05D006270 ORTHO05D007755 1.7e-62 243.8 211 60.7
THA.LOC104809733 Tarenaya hassleriana HOM05D006270 ORTHO05D007755 2.2e-62 243.4 191 62.3
Carub.0002s1881 Capsella rubella HOM05D006270 ORTHO05D007755 2.9e-62 243.0 192 62.5
CiPaw.16G073500 Carya illinoinensis HOM05D006270 ORTHO05D007755 3.7e-62 242.7 299 48.2
Aa31LG4G10780 Aethionema arabicum HOM05D006270 ORTHO05D007755 4.9e-62 242.3 192 60.4
AT1G72030 Arabidopsis thaliana HOM05D006270 ORTHO05D007755 4.9e-62 242.3 192 62.0
HPP92_002765 Vanilla planifolia HOM05D006270 ORTHO05D007755 4.9e-62 242.3 189 64.6
Nn5g27482 Nelumbo nucifera HOM05D006270 ORTHO05D007755 6.4e-62 241.9 275 52.7
AL2G31660 Arabidopsis lyrata HOM05D006270 ORTHO05D007755 1.1e-61 241.1 193 62.7
PGSC0003DMG400007305 Solanum tuberosum HOM05D006270 ORTHO05D007755 9.2e-61 238.0 203 60.1
CsaV3_7G024750 Cucumis sativus L. HOM05D006270 ORTHO05D007755 1.6e-60 237.3 191 59.7
CAN.G1280.16 Capsicum annuum HOM05D006270 ORTHO05D007755 1.3e-59 234.2 202 61.4
ClCG09G010100 Citrullus lanatus HOM05D006270 ORTHO05D007755 2.3e-59 233.4 191 59.2
Sed0023542 Sechium edule HOM05D006270 ORTHO05D007755 3.0e-59 233.0 191 60.7
SEGI_40158 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 5.0e-59 232.3 198 58.1
Sopen11g010160 Solanum pennellii HOM05D006270 ORTHO05D007755 2.1e-57 226.9 183 57.4
PGSC0003DMG400034528 Solanum tuberosum HOM05D006270 ORTHO05D007755 6.2e-57 225.3 186 58.1
Lj7A621T38 Lonicera japonica HOM05D006270 ORTHO05D007755 1.1e-56 224.6 147 74.8
CSS0031567 Camellia sinensis var. sinensis HOM05D006270 ORTHO05D007755 1.4e-53 214.2 233 54.1
Pp3c3_19510 Physcomitrium patens HOM05D006270 ORTHO05D007755 6.0e-52 208.8 200 50.5
SMO352G0005 Selaginella moellendorffii HOM05D006270 ORTHO05D007755 6.0e-52 208.8 193 52.3
Ca_19683_v3 Cicer arietinum L. HOM05D006270 ORTHO05D007755 2.3e-51 206.8 148 65.5
AUR62004580 Chenopodium quinoa HOM05D006270 ORTHO05D007755 2.7e-44 183.3 116 76.7
Prupe.2G311100 Prunus persica HOM05D006270 ORTHO05D007755 7.8e-44 181.8 134 70.1
Mapoly0148s0033 Marchantia polymorpha HOM05D006270 ORTHO05D007755 3.3e-42 176.4 289 39.4
FvH4_7g31720 Fragaria vesca HOM05D006270 ORTHO05D007755 1.1e-40 171.4 134 66.4
MBI06_g06704_MAGBIO Magnolia biondii HOM05D006270 ORTHO05D007755 4.4e-39 166.0 151 58.3
CDE04G3476 Ceratophyllum demersum HOM05D006270 ORTHO05D007755 1.3e-38 164.5 169 50.3
Zm00001eb304740 Zea mays HOM05D006270 ORTHO05D007755 4.9e-38 162.5 136 61.8
SEGI_10565 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 3.9e-35 152.9 131 59.5
SEGI_32338 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 2.1e-33 147.1 116 65.5
MELO3C024085.2 Cucumis melo HOM05D006270 ORTHO05D007755 6.9e-32 142.1 132 55.3
Solyc11g020000.1 Solanum lycopersicum HOM05D006270 ORTHO05D007755 2.0e-31 140.6 183 40.4
Ah.05g178770 Amaranthus hybridus HOM05D006270 ORTHO05D007755 9.3e-29 131.7 126 56.3
AagrBONN_evm.TU.Sc2ySwM_228.4762 Anthoceros agrestis HOM05D006270 ORTHO05D007755 2.3e-27 127.1 131 55.0
SEGI_00952 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 1.5e-26 124.4 112 59.8
GSVIVG01026021001 Vitis vinifera HOM05D000026 ORTHO05D001436 8.1e-25 118.6 87 69.0
MD01G1220200 Malus domestica HOM05D006270 ORTHO05D007755 9.9e-23 111.7 77 71.4
Nitab4.5_0000329g0020 Nicotiana tabacum HOM05D006270 ORTHO05D007755 2.2e-22 110.5 126 50.0
SEGI_26224 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 5.4e-21 105.9 95 61.1
CBR_g50390 Chara braunii HOM05D000019 ORTHO05D000002 1.5e-18 97.8 113 41.6
GSVIVG01026018001 Vitis vinifera HOM05D006270 ORTHO05D007755 9.3e-13 78.6 46 76.1
SEGI_09763 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 8.2e-09 65.5 64 59.4
SEGI_10524 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 3.1e-08 63.5 66 54.5
MCO16G519 Micromonas commoda HOM05D006270 ORTHO05D007755 4.0e-08 63.2 85 37.6
BcaC08g45742 Brassica carinata HOM05D006270 ORTHO05D007755 4.9e-06 56.2 41 63.4
MCO13G231 Micromonas commoda HOM05D005733 ORTHO05D006928 4.9e-06 56.2 81 34.6
SEGI_16930 Sequoiadendron giganteum HOM05D005733 ORTHO05D007442 4.9e-06 56.2 83 27.7


User provided reference genes

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