Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv03022 Davidia involucrata HOM05D002620 ORTHO05D006469 1.8e-159 565.8 279 100.0
Dinv01365 Davidia involucrata HOM05D002620 ORTHO05D006469 1.8e-63 246.9 144 86.8
Hma1.2p1_0362F.1_g136450 Hydrangea macrophylla HOM05D002620 ORTHO05D006469 4.3e-36 156.0 147 63.3
vmacro07605 Vaccinium macrocarpon HOM05D002620 ORTHO05D006469 1.4e-34 151.0 150 59.3
CSS0042358 Camellia sinensis var. sinensis HOM05D002620 ORTHO05D006469 2.9e-32 143.3 156 57.7
TAR623G0172 Trochodendron aralioides HOM05D002620 ORTHO05D006469 8.3e-32 141.7 148 53.4
Hma1.2p1_0362F.1_g136460 Hydrangea macrophylla HOM05D002620 ORTHO05D006469 1.6e-30 137.5 118 63.6
Nn1g02057 Nelumbo nucifera HOM05D002620 ORTHO05D006469 2.7e-30 136.7 147 53.7
TAR636G0672 Trochodendron aralioides HOM05D002620 ORTHO05D006469 7.3e-28 128.6 147 51.0
Cfa017186 Carpinus fangiana HOM05D002620 ORTHO05D006469 2.8e-27 126.7 185 47.6
Haze_21023 Corylus avellana HOM05D002620 ORTHO05D006469 4.7e-27 125.9 148 56.1
Rhsim08G0091300 Rhododendron simsii HOM05D002620 ORTHO05D006469 2.3e-26 123.6 149 51.0
Rhsim08G0090800 Rhododendron simsii HOM05D002620 ORTHO05D006469 3.1e-26 123.2 150 49.3
CiPaw.09G211100 Carya illinoinensis HOM05D002620 ORTHO05D006469 2.6e-25 120.2 179 45.8
Actinidia20745 Actinidia chinensis HOM05D002620 ORTHO05D006469 1.3e-24 117.9 143 51.0
Atru.chr8.2267 Acer truncatum HOM05D002620 ORTHO05D006469 4.9e-24 115.9 151 51.7
QL04p017779 Quercus lobata HOM05D002620 ORTHO05D006469 1.1e-23 114.8 175 46.3
ClCG04G006940 Citrullus lanatus HOM05D002620 ORTHO05D006469 4.1e-23 112.8 147 50.3
MBI08_g18760_MAGBIO Magnolia biondii HOM05D002620 ORTHO05D006469 9.2e-23 111.7 155 47.7
Ciclev10012213m.g Citrus clementina HOM05D002620 ORTHO05D006469 1.2e-22 111.3 148 48.0
Cc10_g12170 Coffea canephora HOM05D002620 ORTHO05D006469 1.6e-22 110.9 157 45.9
Manes.09G107200 Manihot esculenta HOM05D002620 ORTHO05D006469 2.7e-22 110.2 149 43.6
Eucgr.A00532 Eucalyptus grandis HOM05D002620 ORTHO05D006469 3.5e-22 109.8 148 46.6
Duzib093G1276 Durio zibethinus HOM05D002620 ORTHO05D006469 1.3e-21 107.8 179 44.1
Lsat_1_v5_gn_8_101621 Lactuca sativa HOM05D002620 ORTHO05D006469 3.9e-21 106.3 176 42.0
Gohir.D04G131800 Gossypium hirsutum HOM05D002620 ORTHO05D006469 5.0e-21 105.9 147 46.9
Gorai.012G115600 Gossypium raimondii HOM05D002620 ORTHO05D006469 5.0e-21 105.9 147 46.9
CAN.G397.6 Capsicum annuum HOM05D002620 ORTHO05D006469 8.6e-21 105.1 142 43.7
GSVIVG01011183001 Vitis vinifera HOM05D002620 ORTHO05D006469 1.1e-20 104.8 143 49.7
Ah.12g058780 Amaranthus hybridus HOM05D002620 ORTHO05D006469 1.9e-20 104.0 149 43.0
CANSAT35G0894 Cannabis sativa HOM05D002620 ORTHO05D006469 4.3e-20 102.8 150 48.0
RcHm_v2.0_Chr7g0216861 Rosa chinensis HOM05D002620 ORTHO05D006469 5.6e-20 102.4 105 54.3
Lj2A72T45 Lonicera japonica HOM05D002620 ORTHO05D006469 1.2e-19 101.3 127 51.2
Sed0003396 Sechium edule HOM05D002620 ORTHO05D006469 2.1e-19 100.5 147 45.6
PGSC0003DMG402004451 Solanum tuberosum HOM05D002620 ORTHO05D006469 2.1e-19 100.5 167 41.3
TWI77G0686 Tripterygium wilfordii HOM05D002620 ORTHO05D006469 2.1e-19 100.5 154 44.8
Gohir.A04G092500 Gossypium hirsutum HOM05D002620 ORTHO05D006469 4.7e-19 99.4 178 40.4
Prupe.6G279900 Prunus persica HOM05D002620 ORTHO05D006469 1.1e-18 98.2 152 44.7
DCAR_015398 Daucus carota HOM05D002620 ORTHO05D006469 1.8e-18 97.4 181 40.9
MSTRG.10211 Avicennia marina HOM05D002620 ORTHO05D006469 6.8e-18 95.5 163 39.9
MELO3C025997.2 Cucumis melo HOM05D002620 ORTHO05D006469 1.5e-17 94.4 156 43.6
FAN28G0365 Fragaria x ananassa HOM05D002620 ORTHO05D006469 1.5e-17 94.4 138 42.8
Nitab4.5_0007485g0030 Nicotiana tabacum HOM05D002620 ORTHO05D006469 1.5e-17 94.4 161 41.6
Ca_07656_v3 Cicer arietinum L. HOM05D002620 ORTHO05D006469 3.4e-17 93.2 149 39.6
FAN28G0536 Fragaria x ananassa HOM05D002620 ORTHO05D006469 4.4e-17 92.8 138 42.8
Glyma.07G152200 Glycine max HOM05D002620 ORTHO05D006469 5.8e-17 92.4 177 40.1
Solyc09g005640.3 Solanum lycopersicum HOM05D002620 ORTHO05D006469 5.8e-17 92.4 146 40.4
Thecc.05G013300 Theobroma cacao HOM05D002620 ORTHO05D006469 5.8e-17 92.4 136 44.1
CsaV3_4G026320 Cucumis sativus L. HOM05D002620 ORTHO05D006469 9.9e-17 91.7 149 43.6
HanXRQChr06g0182221 Helianthus annuus HOM05D002620 ORTHO05D006469 9.9e-17 91.7 74 59.5
HanXRQChr16g0508591 Helianthus annuus HOM05D002620 ORTHO05D006469 1.7e-16 90.9 143 42.0
Lj1g0015893 Lotus japonicus HOM05D002620 ORTHO05D006469 2.9e-16 90.1 165 39.4
Aqoxy2G00103 Aquilegia oxysepala HOM05D002620 ORTHO05D006469 3.7e-16 89.7 146 41.8
ECA236G1932 Erigeron canadensis HOM05D002620 ORTHO05D006469 4.9e-16 89.4 143 40.6
VMungo1383G1480 Vigna mungo HOM05D002620 ORTHO05D006469 8.3e-16 88.6 155 41.9
ATR0757G130 Amborella trichopoda HOM05D002620 ORTHO05D006469 1.1e-15 88.2 159 42.8
Glyma.18G203300 Glycine max HOM05D002620 ORTHO05D006469 1.1e-15 88.2 156 41.0
Oeu028411.1 Olea europaea HOM05D002620 ORTHO05D006469 1.1e-15 88.2 155 40.6
FAN26G2649 Fragaria x ananassa HOM05D002620 ORTHO05D006469 1.4e-15 87.8 136 41.9
Phvul.008G096600 Phaseolus vulgaris HOM05D002620 ORTHO05D006469 1.4e-15 87.8 127 45.7
Sc22g0002540 Simmondsia chinensis HOM05D002620 ORTHO05D006469 1.9e-15 87.4 163 38.0
Psat3g126840 Pisum sativum HOM05D002620 ORTHO05D006469 2.4e-15 87.0 161 39.1
SalBow4G1934 Salvia bowleyana HOM05D002620 ORTHO05D006469 2.4e-15 87.0 160 34.4
Cpa.g.sc11.86 Carica papaya HOM05D002620 ORTHO05D006469 4.1e-15 86.3 178 36.0
Oeu038760.2 Olea europaea HOM05D002620 ORTHO05D006469 1.6e-14 84.3 155 40.0
Sabra16G0114800 Salix brachista HOM05D002620 ORTHO05D006469 1.6e-14 84.3 155 41.3
Lalb_Chr19g0124451 Lupinus albus HOM05D002620 ORTHO05D006469 2.1e-14 84.0 96 50.0
A03p36260 Brassica napus HOM05D002620 ORTHO05D006469 3.5e-14 83.2 147 41.5
LjContig00408g0009428 Lotus japonicus HOM05D002620 ORTHO05D006469 3.5e-14 83.2 140 40.7
AL3G19970 Arabidopsis lyrata HOM05D002620 ORTHO05D006469 4.6e-14 82.8 158 38.6
arahy.Tifrunner.gnm1.ann1.6AU7NA Arachis hypogaea HOM05D002620 ORTHO05D006469 4.6e-14 82.8 123 44.7
HPP92_013561 Vanilla planifolia HOM05D002620 ORTHO05D006469 6.0e-14 82.4 76 55.3
AT3G08950 Arabidopsis thaliana HOM05D002620 ORTHO05D006469 1.0e-13 81.6 158 39.2
Hund10986 Selenicereus undatus HOM05D002620 ORTHO05D006469 1.3e-13 81.3 193 33.7
unitig_88.g27666 Utricularia gibba HOM05D002620 ORTHO05D006469 1.3e-13 81.3 79 51.9
FvH4_1g26950 Fragaria vesca HOM05D002620 ORTHO05D006469 3.0e-13 80.1 137 40.1
arahy.Tifrunner.gnm1.ann1.0H8BAV Arachis hypogaea HOM05D002620 ORTHO05D006469 3.9e-13 79.7 121 42.1
BraA03t12797Z Brassica rapa HOM05D002620 ORTHO05D006469 5.1e-13 79.3 147 40.1
MD12G1171700 Malus domestica HOM05D002620 ORTHO05D006469 5.1e-13 79.3 145 39.3
Medtr7g069070 Medicago truncatula HOM05D002620 ORTHO05D006469 1.5e-12 77.8 156 37.2
Peaxi162Scf00890g00115 Petunia axillaris HOM05D002620 ORTHO05D006469 1.9e-12 77.4 53 64.2
TPR.G2537 Trifolium pratense HOM05D002620 ORTHO05D006469 1.9e-12 77.4 171 34.5
Aa31LG5G18910 Aethionema arabicum HOM05D002620 ORTHO05D006469 2.5e-12 77.0 151 39.1
BolC3t16658H Brassica oleracea HOM05D002620 ORTHO05D006469 2.5e-12 77.0 88 50.0
MD00G1061600 Malus domestica HOM05D002620 ORTHO05D006469 2.5e-12 77.0 138 39.1
FAN23G3025 Fragaria x ananassa HOM05D002620 ORTHO05D006469 3.3e-12 76.6 138 39.1
COL.COLO4_14508 Corchorus olitorius HOM05D002620 ORTHO05D006469 4.3e-12 76.3 112 42.0
Thhalv10021214m.g Eutrema salsugineum HOM05D002620 ORTHO05D006469 5.6e-12 75.9 155 39.4
Sopen09g001540 Solanum pennellii HOM05D002620 ORTHO05D006469 5.6e-12 75.9 89 46.1
CDE04G0754 Ceratophyllum demersum HOM05D002620 ORTHO05D006469 9.5e-12 75.1 80 55.0
SGA_v2.0_scaffold240G44084 Striga asiatica HOM05D002620 ORTHO05D006469 9.5e-12 75.1 166 34.9
AUR62030812 Chenopodium quinoa HOM05D002620 ORTHO05D006469 2.1e-11 73.9 186 30.6
CARHR083290 Cardamine hirsuta HOM05D002620 ORTHO05D006469 2.8e-11 73.6 158 34.8
Migut.L02026 Erythranthe guttata HOM05D002620 ORTHO05D006469 2.8e-11 73.6 166 33.1
PGR004G1375 Punica granatum HOM05D002620 ORTHO05D006469 2.8e-11 73.6 176 37.5
Carub.0003s0808 Capsella rubella HOM05D002620 ORTHO05D006469 8.1e-11 72.0 153 35.3
Lj1g0002904 Lotus japonicus HOM05D002620 ORTHO05D006469 8.1e-11 72.0 67 52.2
FAN19G3002 Fragaria x ananassa HOM05D002620 ORTHO05D006469 3.1e-10 70.1 94 42.6
THA.LOC104827049 Tarenaya hassleriana HOM05D002620 ORTHO05D006469 3.1e-10 70.1 155 38.1
Nn2g13163 Nelumbo nucifera HOM05D002620 ORTHO05D006469 6.8e-10 68.9 117 41.9
A05p39890 Brassica napus HOM05D002620 ORTHO05D006469 2.0e-09 67.4 37 75.7
C05p58930 Brassica napus HOM05D002620 ORTHO05D006469 2.0e-09 67.4 37 75.7
BolC5t34546H Brassica oleracea HOM05D002620 ORTHO05D006469 2.0e-09 67.4 37 75.7
BraSC256t45935Z Brassica rapa HOM05D002620 ORTHO05D006469 2.0e-09 67.4 37 75.7
Sp3g07370 Schrenkiella parvula HOM05D002620 ORTHO05D006469 2.0e-09 67.4 156 34.0
CDE07G1920 Ceratophyllum demersum HOM05D002620 ORTHO05D006469 5.8e-09 65.9 81 51.9
AUR62030482 Chenopodium quinoa HOM05D002620 ORTHO05D006469 1.3e-08 64.7 198 30.3
BcaC01g04208 Brassica carinata HOM05D002620 ORTHO05D006469 2.9e-08 63.5 159 35.2
Potri.016G118700 Populus trichocarpa HOM05D002620 ORTHO05D006469 2.9e-08 63.5 152 37.5
ATR0721G043 Amborella trichopoda HOM05D002620 ORTHO05D006469 4.9e-08 62.8 47 68.1
C03p43900 Brassica napus HOM05D002620 ORTHO05D006469 4.9e-08 62.8 34 73.5
BcaC05g29629 Brassica carinata HOM05D002620 ORTHO05D006469 8.4e-08 62.0 32 78.1
FAN08G2653 Fragaria x ananassa HOM05D002620 ORTHO05D006469 4.1e-07 59.7 31 77.4
SEGI_18516 Sequoiadendron giganteum HOM05D002620 ORTHO05D006469 4.1e-07 59.7 36 75.0
Mapoly0023s0103 Marchantia polymorpha HOM05D002620 ORTHO05D006469 1.2e-06 58.2 68 54.4
Os02g0159700 Oryza sativa ssp. japonica HOM05D002620 ORTHO05D006469 2.1e-06 57.4 43 65.1
EL10Ac5g12542 Beta vulgaris HOM05D002620 ORTHO05D006469 4.6e-06 56.2 30 73.3


User provided reference genes

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