Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv02787 Davidia involucrata HOM05D007667 ORTHO05D008033 1.3e-129 466.5 241 100.0
GSVIVG01025830001 Vitis vinifera HOM05D007667 ORTHO05D008033 3.7e-52 209.1 251 56.6
Dinv21555 Davidia involucrata HOM05D007667 ORTHO05D008033 7.6e-50 201.4 138 81.9
Nn7g37184 Nelumbo nucifera HOM05D007667 ORTHO05D001109 3.7e-44 182.6 284 46.1
Glyma.19G122200 Glycine max HOM05D007667 ORTHO05D008033 2.2e-41 173.3 248 50.0
TAR623G0652 Trochodendron aralioides HOM05D007667 ORTHO05D008033 3.8e-41 172.6 281 46.6
Phvul.001G101500 Phaseolus vulgaris HOM05D007667 ORTHO05D008033 1.0e-38 164.5 241 49.4
VMungo1383G2866 Vigna mungo HOM05D007667 ORTHO05D008033 3.9e-38 162.5 246 49.2
MBI13_g29622_MAGBIO Magnolia biondii HOM05D007667 ORTHO05D008033 6.7e-38 161.8 245 48.6
Psat0s3111g0200 Pisum sativum HOM05D007667 ORTHO05D008033 1.5e-37 160.6 255 47.5
Glyma.03G003800 Glycine max HOM05D007667 ORTHO05D008033 9.7e-37 157.9 248 49.2
Lj1g0016001 Lotus japonicus HOM05D007667 ORTHO05D008033 9.7e-37 157.9 258 46.1
Lj1A1064T35 Lonicera japonica HOM05D007667 ORTHO05D008033 2.8e-36 156.4 288 42.0
Sc13g0000730 Simmondsia chinensis HOM05D007667 ORTHO05D008033 1.8e-35 153.7 193 52.8
arahy.Tifrunner.gnm1.ann1.B2YDCU Arachis hypogaea HOM05D007667 ORTHO05D008033 4.1e-35 152.5 264 45.8
Cfa019904 Carpinus fangiana HOM05D007667 ORTHO05D008033 6.9e-35 151.8 251 46.2
arahy.Tifrunner.gnm1.ann1.2JVN0K Arachis hypogaea HOM05D007667 ORTHO05D008033 1.5e-34 150.6 264 45.1
CiPaw.09G161700 Carya illinoinensis HOM05D007667 ORTHO05D008033 1.5e-34 150.6 271 44.3
Potri.016G024600 Populus trichocarpa HOM05D007667 ORTHO05D008033 3.4e-34 149.4 266 44.4
Ca_08329_v3 Cicer arietinum L. HOM05D007667 ORTHO05D008033 5.9e-34 148.7 254 45.3
Lalb_Chr14g0365211 Lupinus albus HOM05D007667 ORTHO05D008033 1.3e-33 147.5 252 46.0
Medtr7g087970 Medicago truncatula HOM05D007667 ORTHO05D008033 2.2e-33 146.7 247 47.0
QL07p015392 Quercus lobata HOM05D007667 ORTHO05D008033 1.1e-32 144.4 264 44.3
Prupe.7G023900 Prunus persica HOM05D007667 ORTHO05D008033 9.4e-32 141.4 256 43.8
Sabra06G0019700 Salix brachista HOM05D007667 ORTHO05D008033 7.9e-31 138.3 264 42.8
Potri.006G026600 Populus trichocarpa HOM05D007667 ORTHO05D008033 1.4e-30 137.5 267 41.6
MD12G1111200 Malus domestica HOM05D007667 ORTHO05D008033 1.8e-30 137.1 258 44.2
TWI77G1010 Tripterygium wilfordii HOM05D007667 ORTHO05D008033 1.1e-29 134.4 256 42.6
PGR142G2092 Punica granatum HOM05D007667 ORTHO05D008033 2.2e-28 130.2 275 41.8
TPR.G23684 Trifolium pratense HOM05D007667 ORTHO05D008033 3.7e-28 129.4 218 45.4
Sabra16G0030500 Salix brachista HOM05D007667 ORTHO05D008033 6.3e-28 128.6 269 41.3
Oeu041986.1 Olea europaea HOM05D007667 ORTHO05D008033 1.1e-27 127.9 265 40.4
Aqoxy3G03841 Aquilegia oxysepala HOM05D007667 ORTHO05D008033 2.4e-27 126.7 236 41.5
Oeu060747.1 Olea europaea HOM05D007667 ORTHO05D008033 5.9e-26 122.1 262 39.3
Lalb_Chr22g0358171 Lupinus albus HOM05D007667 ORTHO05D008033 7.7e-26 121.7 232 38.8
CANSAT01G1982 Cannabis sativa HOM05D007667 ORTHO05D008033 1.3e-25 120.9 266 39.1
CSS0027019 Camellia sinensis var. sinensis HOM05D007667 ORTHO05D008033 1.7e-25 120.6 187 44.9
CsaV3_4G028970 Cucumis sativus L. HOM05D007667 ORTHO05D008033 2.2e-25 120.2 267 40.1
Eucgr.K01702 Eucalyptus grandis HOM05D007667 ORTHO05D008033 2.9e-25 119.8 274 38.3
arahy.Tifrunner.gnm1.ann1.EU10QV Arachis hypogaea HOM05D007667 ORTHO05D008033 8.5e-25 118.2 178 46.6
ClCG04G005020 Citrullus lanatus HOM05D007667 ORTHO05D008033 1.1e-24 117.9 259 40.2
MSTRG.6277 Avicennia marina HOM05D007667 ORTHO05D008033 7.2e-24 115.2 254 39.0
arahy.Tifrunner.gnm1.ann1.8XR3F9 Arachis hypogaea HOM05D007667 ORTHO05D008033 9.4e-24 114.8 177 48.0
Haze_20347 Corylus avellana HOM05D007667 ORTHO05D008033 1.2e-23 114.4 199 44.2
Sed0012185 Sechium edule HOM05D007667 ORTHO05D008033 6.1e-23 112.1 272 37.9
vmacro07594 Vaccinium macrocarpon HOM05D007667 ORTHO05D008033 1.0e-22 111.3 299 36.1
Cfa010473 Carpinus fangiana HOM05D007667 ORTHO05D008033 1.8e-22 110.5 158 48.1
Hund19052 Selenicereus undatus HOM05D007667 ORTHO05D008033 3.9e-22 109.4 259 35.9
SalBow6G3731 Salvia bowleyana HOM05D007667 ORTHO05D008033 5.2e-22 109.0 200 42.5
SGA_v2.0_scaffold66G22329 Striga asiatica HOM05D007667 ORTHO05D008033 2.8e-20 103.2 247 37.2
ATR1096G118 Amborella trichopoda HOM05D007667 ORTHO05D008033 3.1e-19 99.8 313 32.6
HPP92_012452 Vanilla planifolia HOM05D007667 ORTHO05D008033 7.0e-19 98.6 258 35.7
Migut.J01575 Erythranthe guttata HOM05D007667 ORTHO05D008033 2.6e-18 96.7 272 34.9
EL10Ac3g07362 Beta vulgaris HOM05D007667 ORTHO05D008033 5.9e-18 95.5 260 34.2
Ah.13g077440 Amaranthus hybridus HOM05D007667 ORTHO05D008033 1.7e-17 94.0 258 35.3
Atru.chr8.918 Acer truncatum HOM05D007667 ORTHO05D008033 6.5e-17 92.0 165 40.6
RcHm_v2.0_Chr3g0495051 Rosa chinensis HOM05D007667 ORTHO05D008033 1.5e-16 90.9 253 37.2
Thecc.05G130400 Theobroma cacao HOM05D007667 ORTHO05D008033 1.9e-16 90.5 149 39.6
Ciclev10012153m.g Citrus clementina HOM05D007667 ORTHO05D008033 4.2e-16 89.4 258 34.9
PSO384G0308 Papaver somniferum HOM05D007667 ORTHO05D008033 7.2e-16 88.6 297 31.6
unitig_744.g24157 Utricularia gibba HOM05D007667 ORTHO05D008033 7.2e-16 88.6 164 42.7
PSO339G5815 Papaver somniferum HOM05D007667 ORTHO05D008033 2.7e-15 86.7 291 32.0
RhsimUnG0021200 Rhododendron simsii HOM05D007667 ORTHO05D008033 2.7e-15 86.7 216 33.8
arahy.Tifrunner.gnm1.ann1.3W78Z9 Arachis hypogaea HOM05D007667 ORTHO05D008033 3.6e-15 86.3 147 43.5
AUR62043193 Chenopodium quinoa HOM05D003743 ORTHO05D004311 8.0e-15 85.1 202 40.1
Cc06_g20370 Coffea canephora HOM05D007667 ORTHO05D008033 8.0e-15 85.1 264 34.1
arahy.Tifrunner.gnm1.ann1.8931ZB Arachis hypogaea HOM05D007667 ORTHO05D008033 1.4e-14 84.3 153 44.4
arahy.Tifrunner.gnm1.ann1.S7MPKE Arachis hypogaea HOM05D007667 ORTHO05D008033 2.3e-14 83.6 84 61.9
Duzib128G0300 Durio zibethinus HOM05D007667 ORTHO05D008033 4.0e-14 82.8 141 41.1
arahy.Tifrunner.gnm1.ann1.NYTL45 Arachis hypogaea HOM05D007667 ORTHO05D008033 6.7e-14 82.0 84 58.3
arahy.Tifrunner.gnm1.ann1.48UEJW Arachis hypogaea HOM05D007667 ORTHO05D008033 8.8e-14 81.6 85 60.0
Nitab4.5_0002201g0030 Nicotiana tabacum HOM05D007667 ORTHO05D008033 1.2e-13 81.3 175 40.0
Cpa.g.sc33.176 Carica papaya HOM05D007667 ORTHO05D008033 2.0e-13 80.5 170 40.0
SalBow6G3030 Salvia bowleyana HOM05D007667 ORTHO05D008033 2.6e-13 80.1 177 39.0
CDE04G0047 Ceratophyllum demersum HOM05D007667 ORTHO05D008033 3.3e-13 79.7 353 27.5
AUR62020979 Chenopodium quinoa HOM05D003743 ORTHO05D004311 4.4e-13 79.3 124 46.8
MBI13_g31583_MAGBIO Magnolia biondii HOM05D007667 ORTHO05D008033 5.7e-13 79.0 66 69.7
Manes.08G067300 Manihot esculenta HOM05D007667 ORTHO05D008033 7.5e-13 78.6 152 38.8
CDE02G4005 Ceratophyllum demersum HOM05D000558 ORTHO05D008033 3.7e-12 76.3 117 43.6
MBI13_g08647_MAGBIO Magnolia biondii HOM05D007667 ORTHO05D008033 3.7e-12 76.3 118 41.5
FvH4_1g29470 Fragaria vesca HOM05D007667 ORTHO05D008033 4.8e-12 75.9 97 50.5
HPP92_014340 Vanilla planifolia HOM05D007667 ORTHO05D008033 1.1e-11 74.7 190 35.8
COL.COLO4_22773 Corchorus olitorius HOM05D007667 ORTHO05D008033 2.4e-11 73.6 160 40.6
arahy.Tifrunner.gnm1.ann1.W45WAC Arachis hypogaea HOM05D007667 ORTHO05D008033 7.0e-11 72.0 85 56.5
Sopen08g020950 Solanum pennellii HOM05D007667 ORTHO05D008033 1.0e-09 68.2 164 35.4
Solyc08g067000.3 Solanum lycopersicum HOM05D007667 ORTHO05D008033 2.2e-09 67.0 165 35.8
Os03g0319200 Oryza sativa ssp. japonica HOM05D043175 ORTHO05D008033 6.5e-09 65.5 170 36.5
Ah.04g150340 Amaranthus hybridus HOM05D003123 ORTHO05D003492 8.5e-09 65.1 128 40.6
Zm00001eb015190 Zea mays HOM05D043175 ORTHO05D008033 1.2e-07 61.2 190 32.6
PGSC0003DMG400029088 Solanum tuberosum HOM05D007667 ORTHO05D008033 6.1e-07 58.9 140 32.9
Actinidia37860 Actinidia chinensis HOM05D007667 ORTHO05D008033 1.0e-06 58.2 193 32.6


User provided reference genes

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