Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv02727 Davidia involucrata HOM05D002400 ORTHO05D002568 1.5e-181 639.4 325 100.0
Dinv05456 Davidia involucrata HOM05D002400 ORTHO05D002568 6.9e-179 630.6 325 99.1
Dinv02723 Davidia involucrata HOM05D002400 ORTHO05D002568 1.4e-118 430.3 290 78.6
Dinv05457 Davidia involucrata HOM05D002400 ORTHO05D002568 7.7e-106 387.9 238 84.0
Dinv02725 Davidia involucrata HOM05D002400 ORTHO05D002568 2.6e-77 293.1 316 51.6
Dinv05455 Davidia involucrata HOM05D002400 ORTHO05D002568 9.9e-77 291.2 316 51.3
Dinv02728 Davidia involucrata HOM05D002400 ORTHO05D002568 4.2e-67 259.2 165 79.4
Dinv05453 Davidia involucrata HOM05D002400 ORTHO05D002568 5.1e-65 252.3 170 76.5
Dinv02726 Davidia involucrata HOM05D002400 ORTHO05D002568 7.4e-56 221.9 259 49.0
Dinv28036 Davidia involucrata HOM05D002400 ORTHO05D002568 4.0e-46 189.5 312 41.7
vmacro05682 Vaccinium macrocarpon HOM05D002400 ORTHO05D002568 2.5e-35 153.7 295 33.6
MD14G1024100 Malus domestica HOM05D002400 ORTHO05D002568 1.5e-32 144.4 307 33.9
Prupe.7G108600 Prunus persica HOM05D002400 ORTHO05D002568 3.7e-31 139.8 306 33.7
vmacro12123 Vaccinium macrocarpon HOM05D002400 ORTHO05D002568 1.4e-30 137.9 271 32.1
Dinv02731 Davidia involucrata HOM05D002400 ORTHO05D002568 4.5e-29 132.9 301 33.9
FAN05G4159 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.3e-28 131.3 294 32.3
RcHm_v2.0_Chr3g0473911 Rosa chinensis HOM05D002400 ORTHO05D002568 2.2e-28 130.6 300 32.0
RcHm_v2.0_Chr3g0473961 Rosa chinensis HOM05D002400 ORTHO05D002568 7.2e-27 125.6 313 31.0
FvH4_5g20530 Fragaria vesca HOM05D002400 ORTHO05D002568 6.1e-26 122.5 313 31.9
MD14G1026000 Malus domestica HOM05D002400 ORTHO05D002568 1.4e-25 121.3 320 30.3
Prupe.2G052100 Prunus persica HOM05D002400 ORTHO05D002568 2.3e-25 120.6 299 31.1
MD04G1058800 Malus domestica HOM05D002400 ORTHO05D002568 3.0e-25 120.2 294 30.3
RcHm_v2.0_Chr7g0205891 Rosa chinensis HOM05D002400 ORTHO05D002568 6.7e-25 119.0 296 31.8
FvH4_6g19030 Fragaria vesca HOM05D002400 ORTHO05D002568 8.8e-25 118.6 287 31.0
RcHm_v2.0_Chr3g0474031 Rosa chinensis HOM05D002400 ORTHO05D002568 1.1e-24 118.2 320 29.1
CiPaw.12G069200 Carya illinoinensis HOM05D002400 ORTHO05D002568 1.5e-24 117.9 317 29.7
FAN18G2424 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.5e-24 117.9 293 30.4
Manes.09G032300 Manihot esculenta HOM05D002400 ORTHO05D002568 2.0e-24 117.5 294 33.3
FvH4_5g26410 Fragaria vesca HOM05D002400 ORTHO05D002568 2.6e-24 117.1 293 30.0
RcHm_v2.0_Chr3g0475391 Rosa chinensis HOM05D002400 ORTHO05D002568 2.6e-24 117.1 271 33.2
FvH4_6g18920 Fragaria vesca HOM05D002400 ORTHO05D002568 3.3e-24 116.7 300 30.0
FAN18G0377 Fragaria x ananassa HOM05D002400 ORTHO05D002568 5.7e-24 115.9 317 31.5
FAN18G4571 Fragaria x ananassa HOM05D002400 ORTHO05D002568 5.7e-24 115.9 313 31.6
FAN02G4410 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.7e-23 114.4 287 30.7
FAN14G2096 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.7e-23 114.4 287 30.7
Haze_16779 Corylus avellana HOM05D002400 ORTHO05D002568 2.2e-23 114.0 304 31.2
RcHm_v2.0_Chr7g0205961 Rosa chinensis HOM05D002400 ORTHO05D002568 3.7e-23 113.2 318 30.2
MD14G1025200 Malus domestica HOM05D002400 ORTHO05D002568 8.2e-23 112.1 297 29.0
MD12G1025400 Malus domestica HOM05D002400 ORTHO05D002568 1.1e-22 111.7 296 28.4
MD14G1025300 Malus domestica HOM05D002400 ORTHO05D002568 1.1e-22 111.7 300 30.3
MD14G1026400 Malus domestica HOM05D002400 ORTHO05D002568 1.4e-22 111.3 300 32.3
FAN14G4887 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.8e-22 110.9 308 29.5
RcHm_v2.0_Chr3g0474001 Rosa chinensis HOM05D002400 ORTHO05D002568 3.1e-22 110.2 300 27.3
FvH4_6g19020 Fragaria vesca HOM05D002400 ORTHO05D002568 4.1e-22 109.8 289 29.1
TWI81G0137 Tripterygium wilfordii HOM05D002400 ORTHO05D002568 4.1e-22 109.8 294 29.9
FvH4_7g04740 Fragaria vesca HOM05D002400 ORTHO05D002568 5.3e-22 109.4 275 31.6
FAN18G1895 Fragaria x ananassa HOM05D002400 ORTHO05D002568 5.3e-22 109.4 263 29.3
Haze_04775 Corylus avellana HOM05D002400 ORTHO05D002568 6.9e-22 109.0 289 34.3
FAN06G1414 Fragaria x ananassa HOM05D002400 ORTHO05D002568 6.9e-22 109.0 275 31.6
RcHm_v2.0_Chr3g0475381 Rosa chinensis HOM05D002400 ORTHO05D002568 9.1e-22 108.6 315 29.8
RcHm_v2.0_Chr3g0474171 Rosa chinensis HOM05D002400 ORTHO05D002568 1.2e-21 108.2 302 31.1
RcHm_v2.0_Chr5g0069001 Rosa chinensis HOM05D002400 ORTHO05D002568 1.2e-21 108.2 339 26.8
MD14G1026300 Malus domestica HOM05D002400 ORTHO05D002568 2.0e-21 107.5 308 30.8
FvH4_6g33960 Fragaria vesca HOM05D002400 ORTHO05D002568 3.4e-21 106.7 310 31.3
FAN03G0307 Fragaria x ananassa HOM05D002400 ORTHO05D002568 3.4e-21 106.7 275 31.3
Prupe.1G551800 Prunus persica HOM05D002400 ORTHO05D002568 4.5e-21 106.3 275 31.6
FAN08G1360 Fragaria x ananassa HOM05D002400 ORTHO05D002568 5.9e-21 105.9 332 30.1
MD14G1025600 Malus domestica HOM05D002400 ORTHO05D002568 5.9e-21 105.9 281 29.2
RcHm_v2.0_Chr5g0068981 Rosa chinensis HOM05D002400 ORTHO05D002568 5.9e-21 105.9 344 25.9
vmacro12117 Vaccinium macrocarpon HOM05D002400 ORTHO05D002568 7.7e-21 105.5 336 28.3
Haze_21106 Corylus avellana HOM05D002400 ORTHO05D002568 1.7e-20 104.4 293 31.7
MD14G1024900 Malus domestica HOM05D002400 ORTHO05D002568 1.7e-20 104.4 316 29.1
FAN09G1471 Fragaria x ananassa HOM05D002400 ORTHO05D002568 3.8e-20 103.2 289 29.1
Cfa005421 Carpinus fangiana HOM05D002400 ORTHO05D002568 5.0e-20 102.8 283 32.2
MD14G1025800 Malus domestica HOM05D002400 ORTHO05D002568 5.0e-20 102.8 316 28.2
MD00G1221800 Malus domestica HOM05D002400 ORTHO05D002568 1.4e-19 101.3 293 27.3
MD14G1025400 Malus domestica HOM05D002400 ORTHO05D002568 2.5e-19 100.5 303 27.7
FvH4_6g19010 Fragaria vesca HOM05D002400 ORTHO05D002568 3.2e-19 100.1 305 27.5
RcHm_v2.0_Chr3g0474111 Rosa chinensis HOM05D002400 ORTHO05D002568 3.2e-19 100.1 277 27.4
FAN05G4425 Fragaria x ananassa HOM05D002400 ORTHO05D002568 5.5e-19 99.4 323 27.2
FAN14G3084 Fragaria x ananassa HOM05D002400 ORTHO05D002568 5.5e-19 99.4 305 27.2
TWI60G1609 Tripterygium wilfordii HOM05D002400 ORTHO05D002568 7.2e-19 99.0 301 30.6
MD14G1025100 Malus domestica HOM05D002400 ORTHO05D002568 1.2e-18 98.2 280 30.7
FvH4_1g23521 Fragaria vesca HOM05D002400 ORTHO05D002568 1.6e-18 97.8 304 28.3
Haze_04784 Corylus avellana HOM05D002400 ORTHO05D002568 2.1e-18 97.4 282 31.2
FAN05G1326 Fragaria x ananassa HOM05D002400 ORTHO05D002568 2.7e-18 97.1 257 30.0
FAN09G2665 Fragaria x ananassa HOM05D002400 ORTHO05D002568 2.7e-18 97.1 321 27.1
RcHm_v2.0_Chr3g0474091 Rosa chinensis HOM05D002400 ORTHO05D002568 4.7e-18 96.3 300 26.7
FvH4_6g18950 Fragaria vesca HOM05D002400 ORTHO05D002568 1.4e-17 94.7 255 30.6
FvH4_6g33902 Fragaria vesca HOM05D002400 ORTHO05D002568 2.3e-17 94.0 259 28.2
FAN04G1392 Fragaria x ananassa HOM05D002400 ORTHO05D002568 2.3e-17 94.0 306 28.1
RcHm_v2.0_Chr3g0458171 Rosa chinensis HOM05D002400 ORTHO05D002568 2.3e-17 94.0 323 28.5
FAN09G4576 Fragaria x ananassa HOM05D002400 ORTHO05D002568 5.2e-17 92.8 218 31.2
FAN18G0337 Fragaria x ananassa HOM05D002400 ORTHO05D002568 6.7e-17 92.4 305 27.9
MD14G1026600 Malus domestica HOM05D002400 ORTHO05D002568 6.7e-17 92.4 310 28.4
FAN09G1480 Fragaria x ananassa HOM05D002400 ORTHO05D002568 8.8e-17 92.0 284 28.9
RcHm_v2.0_Chr1g0330111 Rosa chinensis HOM05D002400 ORTHO05D002568 8.8e-17 92.0 268 28.7
FAN02G2106 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.1e-16 91.7 313 26.5
MD12G1201900 Malus domestica HOM05D002400 ORTHO05D002568 1.1e-16 91.7 314 28.0
MD14G1157200 Malus domestica HOM05D002400 ORTHO05D002568 2.0e-16 90.9 327 26.6
Dinv14787 Davidia involucrata HOM05D002400 ORTHO05D002568 2.6e-16 90.5 134 46.3
Duzib132G1153 Durio zibethinus HOM05D002400 ORTHO05D002568 3.3e-16 90.1 268 30.2
FAN05G1596 Fragaria x ananassa HOM05D002400 ORTHO05D002568 3.3e-16 90.1 284 28.9
RcHm_v2.0_Chr3g0481121 Rosa chinensis HOM05D002400 ORTHO05D002568 3.3e-16 90.1 285 27.4
Dinv02729 Davidia involucrata HOM05D002400 ORTHO05D002568 5.7e-16 89.4 307 27.4
FvH4_6g08300 Fragaria vesca HOM05D002400 ORTHO05D002568 9.7e-16 88.6 312 28.5
FAN14G3017 Fragaria x ananassa HOM05D002400 ORTHO05D002568 9.7e-16 88.6 312 28.5
MD14G1026700 Malus domestica HOM05D002400 ORTHO05D002568 9.7e-16 88.6 331 24.8
Prupe.7G106400 Prunus persica HOM05D002400 ORTHO05D002568 4.8e-15 86.3 251 29.5
FAN14G2794 Fragaria x ananassa HOM05D002400 ORTHO05D002568 6.3e-15 85.9 298 24.8
Cfa017093 Carpinus fangiana HOM05D002400 ORTHO05D002568 1.1e-14 85.1 282 29.4
FvH4_6g22710 Fragaria vesca HOM05D002400 ORTHO05D002568 1.4e-14 84.7 298 24.8
FAN08G0492 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.8e-14 84.3 259 26.6
FAN18G0208 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.8e-14 84.3 228 28.9
FAN14G5260 Fragaria x ananassa HOM05D002400 ORTHO05D002568 3.1e-14 83.6 302 24.8
Thecc.04G074200 Theobroma cacao HOM05D020315 ORTHO05D019057 3.1e-14 83.6 231 29.9
MD12G1202000 Malus domestica HOM05D002400 ORTHO05D002568 4.1e-14 83.2 295 26.1
Cfa005425 Carpinus fangiana HOM05D002400 ORTHO05D002568 5.3e-14 82.8 297 28.3
Prupe.6G269600 Prunus persica HOM05D002400 ORTHO05D002568 5.3e-14 82.8 273 28.2
FAN05G0221 Fragaria x ananassa HOM05D002400 ORTHO05D002568 7.0e-14 82.4 298 24.2
Haze_24470 Corylus avellana HOM05D002400 ORTHO05D002568 9.1e-14 82.0 287 29.6
FvH4_6g18911 Fragaria vesca HOM05D002400 ORTHO05D002568 1.2e-13 81.6 297 26.6
MD15G1012200 Malus domestica HOM05D002400 ORTHO05D002568 3.5e-13 80.1 287 24.4
FAN10G1459 Fragaria x ananassa HOM05D002400 ORTHO05D002568 4.5e-13 79.7 285 26.3
FAN13G3133 Fragaria x ananassa HOM05D002400 ORTHO05D002568 4.5e-13 79.7 243 27.6
FAN14G4031 Fragaria x ananassa HOM05D002400 ORTHO05D002568 4.5e-13 79.7 288 26.0
RcHm_v2.0_Chr3g0474131 Rosa chinensis HOM05D002400 ORTHO05D002568 4.5e-13 79.7 306 26.5
Potri.006G248600 Populus trichocarpa HOM05D002400 ORTHO05D019057 1.0e-12 78.6 206 31.1
Haze_24215 Corylus avellana HOM05D002400 ORTHO05D002568 1.7e-12 77.8 311 28.9
FAN05G2917 Fragaria x ananassa HOM05D002400 ORTHO05D002568 3.8e-12 76.6 313 24.9
Sabra06G0191600 Salix brachista HOM05D002400 ORTHO05D002568 5.0e-12 76.3 207 33.3
vmacro05683 Vaccinium macrocarpon HOM05D002400 ORTHO05D002568 5.0e-12 76.3 216 31.0
FvH4_5g26390 Fragaria vesca HOM05D002400 ORTHO05D002568 8.5e-12 75.5 172 32.0
Dinv05458 Davidia involucrata HOM05D002400 ORTHO05D002568 1.9e-11 74.3 99 42.4
FvH4_5g20611 Fragaria vesca HOM05D002400 ORTHO05D002568 1.9e-11 74.3 230 29.6
MD12G1026800 Malus domestica HOM05D002400 ORTHO05D002568 3.2e-11 73.6 236 28.0
QL02p059625 Quercus lobata HOM05D002400 ORTHO05D002568 1.2e-10 71.6 297 27.9
RcHm_v2.0_Chr3g0474191 Rosa chinensis HOM05D002400 ORTHO05D002568 1.2e-10 71.6 270 24.4
RcHm_v2.0_Chr7g0217271 Rosa chinensis HOM05D002400 ORTHO05D002568 3.6e-10 70.1 136 31.6
Potri.006G244700 Populus trichocarpa HOM05D002400 ORTHO05D002568 1.8e-09 67.8 170 32.4
Prupe.6G311500 Prunus persica HOM05D002400 ORTHO05D002568 3.0e-09 67.0 335 24.2
FvH4_5g31730 Fragaria vesca HOM05D002400 ORTHO05D002568 4.0e-09 66.6 234 24.8
FAN26G2620 Fragaria x ananassa HOM05D002400 ORTHO05D002568 4.0e-09 66.6 280 25.0
FAN06G1151 Fragaria x ananassa HOM05D002400 ORTHO05D002568 5.2e-09 66.2 171 29.8
Aqoxy1G03313 Aquilegia oxysepala HOM05D000051 ORTHO05D000015 1.5e-08 64.7 260 28.5
FvH4_6g19370 Fragaria vesca HOM05D002400 ORTHO05D002568 1.5e-08 64.7 287 27.2
FAN14G2111 Fragaria x ananassa HOM05D002400 ORTHO05D002568 2.6e-08 63.9 124 29.8
Potri.017G119200 Populus trichocarpa HOM05D002400 ORTHO05D002568 4.4e-08 63.2 242 28.1
FvH4_6g18982 Fragaria vesca HOM05D002400 ORTHO05D002568 5.7e-08 62.8 175 28.6
FAN14G5794 Fragaria x ananassa HOM05D002400 ORTHO05D002568 5.7e-08 62.8 114 32.5
FvH4_6g18954 Fragaria vesca HOM05D002400 ORTHO05D002568 7.5e-08 62.4 146 30.1
COL.COLO4_25202 Corchorus olitorius HOM05D020315 ORTHO05D019057 9.7e-08 62.0 241 27.0
RcHm_v2.0_Chr3g0474021 Rosa chinensis HOM05D002400 ORTHO05D002568 1.3e-07 61.6 111 34.2
Dinv40730 Davidia involucrata HOM05D000051 ORTHO05D000015 1.7e-07 61.2 284 27.5
RcHm_v2.0_Chr2g0157031 Rosa chinensis HOM05D002400 ORTHO05D002568 1.1e-06 58.5 136 29.4
Prupe.7G105900 Prunus persica HOM05D002400 ORTHO05D002568 1.4e-06 58.2 114 31.6
FAN04G0043 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.8e-06 57.8 124 29.8
MD12G1026500 Malus domestica HOM05D002400 ORTHO05D002568 1.8e-06 57.8 117 30.8
COL.COLO4_29802 Corchorus olitorius HOM05D002400 ORTHO05D002568 4.1e-06 56.6 120 35.0
Dinv20164 Davidia involucrata HOM05D000051 ORTHO05D000015 5.3e-06 56.2 285 26.7
PSO832G1261 Papaver somniferum HOM05D000051 ORTHO05D000015 5.3e-06 56.2 229 26.2
RcHm_v2.0_Chr3g0474141 Rosa chinensis HOM05D002400 ORTHO05D002568 5.3e-06 56.2 317 25.9
TAR624G0459 Trochodendron aralioides HOM05D001396 ORTHO05D000493 5.3e-06 56.2 258 27.1
FvH4_6g18953 Fragaria vesca HOM05D002400 ORTHO05D002568 7.0e-06 55.8 141 27.0
Prupe.7G105000 Prunus persica HOM05D002400 ORTHO05D002568 7.0e-06 55.8 149 31.5
Prupe.7G105500 Prunus persica HOM05D002400 ORTHO05D002568 9.1e-06 55.5 114 28.9


User provided reference genes

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