Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv02640 Davidia involucrata HOM05D000146 ORTHO05D182962 6.1e-46 187.2 98 100.0
Dinv36286 Davidia involucrata HOM05D000146 ORTHO05D002110 5.2e-13 77.8 55 72.7
TAR623G0874 Trochodendron aralioides HOM05D000146 ORTHO05D002110 1.3e-11 73.2 55 69.1
TAR369G0369 Trochodendron aralioides HOM05D000146 ORTHO05D002110 2.2e-11 72.4 55 69.1
CSS0028546 Camellia sinensis var. sinensis HOM05D000146 ORTHO05D002110 2.8e-11 72.0 55 69.1
GSVIVG01025309001 Vitis vinifera HOM05D000146 ORTHO05D002110 3.7e-11 71.6 48 75.0
TAR633G1287 Trochodendron aralioides HOM05D000146 ORTHO05D002110 6.3e-11 70.9 55 67.3
Nn2g15408 Nelumbo nucifera HOM05D000146 ORTHO05D002110 8.3e-11 70.5 55 65.5
TWI34G0291 Tripterygium wilfordii HOM05D000146 ORTHO05D002110 1.1e-10 70.1 55 67.3
Sc16g0011620 Simmondsia chinensis HOM05D000146 ORTHO05D002110 1.8e-10 69.3 47 74.5
Actinidia16306 Actinidia chinensis HOM05D000146 ORTHO05D002110 2.4e-10 68.9 55 65.5
Actinidia06884 Actinidia chinensis HOM05D000146 ORTHO05D002110 3.1e-10 68.6 55 65.5
Glyma.11G131800 Glycine max HOM05D000146 ORTHO05D002110 3.1e-10 68.6 55 63.6
Nn7g36186 Nelumbo nucifera HOM05D000146 ORTHO05D002110 3.1e-10 68.6 55 67.3
PGR102G0563 Punica granatum HOM05D000146 ORTHO05D002110 3.1e-10 68.6 55 65.5
TWI60G1279 Tripterygium wilfordii HOM05D000146 ORTHO05D002110 5.4e-10 67.8 55 65.5
Dinv08038 Davidia involucrata HOM05D000146 ORTHO05D002110 1.2e-09 66.6 55 65.5
CANSAT54G2257 Cannabis sativa HOM05D000146 ORTHO05D002110 1.6e-09 66.2 55 65.5
Cfa009730 Carpinus fangiana HOM05D000146 ORTHO05D002110 2.0e-09 65.9 55 63.6
Lalb_Chr01g0003321 Lupinus albus HOM05D000146 ORTHO05D002110 2.0e-09 65.9 55 61.8
Aqoxy1G00254 Aquilegia oxysepala HOM05D000146 ORTHO05D002110 3.5e-09 65.1 55 61.8
Haze_23084 Corylus avellana HOM05D000146 ORTHO05D002110 4.5e-09 64.7 55 61.8
Cpa.g.sc84.83 Carica papaya HOM05D000146 ORTHO05D002110 5.9e-09 64.3 48 66.7
FAN16G0681 Fragaria x ananassa HOM05D000146 ORTHO05D002110 5.9e-09 64.3 56 62.5
Glyma.13G341400 Glycine max HOM05D000146 ORTHO05D002110 7.7e-09 63.9 55 61.8
Prupe.6G022800 Prunus persica HOM05D000146 ORTHO05D002110 7.7e-09 63.9 64 60.9
CDE06G0182 Ceratophyllum demersum HOM05D000146 ORTHO05D002110 1.0e-08 63.5 55 60.0
Cc01_g04740 Coffea canephora HOM05D000146 ORTHO05D002110 1.0e-08 63.5 47 66.0
CiPaw.13G163700 Carya illinoinensis HOM05D000146 ORTHO05D002110 1.3e-08 63.2 55 63.6
FvH4_3g43220 Fragaria vesca HOM05D000146 ORTHO05D002110 1.3e-08 63.2 56 60.7
FAN11G1446 Fragaria x ananassa HOM05D000146 ORTHO05D002110 1.3e-08 63.2 56 60.7
FAN21G0694 Fragaria x ananassa HOM05D000146 ORTHO05D002110 1.3e-08 63.2 56 60.7
Glyma.12G056000 Glycine max HOM05D000146 ORTHO05D002110 1.3e-08 63.2 55 60.0
MD11G1028700 Malus domestica HOM05D000146 ORTHO05D002110 1.3e-08 63.2 55 61.8
VMungo1127G1602 Vigna mungo HOM05D000146 ORTHO05D002110 1.3e-08 63.2 55 61.8
Hma1.2p1_0027F.1_g017040 Hydrangea macrophylla HOM05D000146 ORTHO05D002110 1.7e-08 62.8 56 62.5
Nitab4.5_0002278g0010 Nicotiana tabacum HOM05D000146 ORTHO05D002110 1.7e-08 62.8 55 60.0
Nitab4.5_0002766g0010 Nicotiana tabacum HOM05D000146 ORTHO05D002110 1.7e-08 62.8 55 60.0
RcHm_v2.0_Chr5g0077231 Rosa chinensis HOM05D000146 ORTHO05D002110 1.7e-08 62.8 55 63.6
FAN25G3152 Fragaria x ananassa HOM05D000146 ORTHO05D002110 2.2e-08 62.4 56 60.7
Phvul.011G057900 Phaseolus vulgaris HOM05D000146 ORTHO05D002110 2.2e-08 62.4 55 60.0
Ciclev10015414m.g Citrus clementina HOM05D000146 ORTHO05D002110 2.9e-08 62.0 55 61.8
Lj1P359T16 Lonicera japonica HOM05D000146 ORTHO05D002110 2.9e-08 62.0 55 58.2
Medtr4g065080 Medicago truncatula HOM05D000146 ORTHO05D002110 2.9e-08 62.0 55 60.0
Atru.chr3.2581 Acer truncatum HOM05D000146 ORTHO05D002110 3.8e-08 61.6 55 58.2
MD03G1023600 Malus domestica HOM05D000146 ORTHO05D002110 3.8e-08 61.6 55 61.8
Phvul.L010343 Phaseolus vulgaris HOM05D000146 ORTHO05D002110 3.8e-08 61.6 55 58.2
DCAR_002053 Daucus carota HOM05D000146 ORTHO05D002110 5.0e-08 61.2 55 54.5
Lj3g0016458 Lotus japonicus HOM05D000146 ORTHO05D002110 5.0e-08 61.2 55 58.2
PSO339G6030 Papaver somniferum HOM05D000146 ORTHO05D002110 5.0e-08 61.2 55 56.4
PSO384G2808 Papaver somniferum HOM05D000146 ORTHO05D002110 6.5e-08 60.8 55 56.4
Potri.003G205800 Populus trichocarpa HOM05D000146 ORTHO05D002110 6.5e-08 60.8 55 60.0
Lj3g0010576 Lotus japonicus HOM05D000146 ORTHO05D002110 8.5e-08 60.5 55 56.4
Manes.06G167100 Manihot esculenta HOM05D000146 ORTHO05D002110 8.5e-08 60.5 55 60.0
Potri.001G018300 Populus trichocarpa HOM05D000146 ORTHO05D002110 8.5e-08 60.5 55 61.8
Thecc.09G227000 Theobroma cacao HOM05D000146 ORTHO05D002110 8.5e-08 60.5 55 56.4
Sopen11g023570 Solanum pennellii HOM05D000146 ORTHO05D002110 1.1e-07 60.1 55 56.4
CDE07G1056 Ceratophyllum demersum HOM05D000146 ORTHO05D002110 1.5e-07 59.7 55 56.4
Manes.14G000800 Manihot esculenta HOM05D000146 ORTHO05D002110 1.5e-07 59.7 55 58.2
QL01p005353 Quercus lobata HOM05D000146 ORTHO05D002110 1.9e-07 59.3 55 60.0
COL.COLO4_24843 Corchorus olitorius HOM05D000146 ORTHO05D002110 2.5e-07 58.9 55 58.2
arahy.Tifrunner.gnm1.ann1.4F27GG Arachis hypogaea HOM05D000146 ORTHO05D002110 3.2e-07 58.5 55 54.5
arahy.Tifrunner.gnm1.ann1.TS2TKV Arachis hypogaea HOM05D000146 ORTHO05D002110 3.2e-07 58.5 55 54.5
CAN.G31.14 Capsicum annuum HOM05D000146 ORTHO05D002110 3.2e-07 58.5 55 54.5
Sc09g0000560 Simmondsia chinensis HOM05D000146 ORTHO05D002110 3.2e-07 58.5 47 63.8
Solyc11g061720.1 Solanum lycopersicum HOM05D000146 ORTHO05D002110 3.2e-07 58.5 55 52.7
VMungo1080G1316 Vigna mungo HOM05D000146 ORTHO05D002110 3.2e-07 58.5 55 56.4
CSS0010504 Camellia sinensis var. sinensis HOM05D000146 ORTHO05D002110 4.2e-07 58.2 55 52.7
CSS0048649 Camellia sinensis var. sinensis HOM05D000146 ORTHO05D002110 4.2e-07 58.2 55 52.7
Sabra03G0152000 Salix brachista HOM05D000146 ORTHO05D002110 4.2e-07 58.2 55 58.2
Sabra03G0152300 Salix brachista HOM05D000146 ORTHO05D002110 4.2e-07 58.2 55 58.2
Gohir.D05G071200 Gossypium hirsutum HOM05D000146 ORTHO05D002110 5.5e-07 57.8 55 58.2
Gohir.D08G023400 Gossypium hirsutum HOM05D000146 ORTHO05D002110 5.5e-07 57.8 55 56.4
Rhsim13G0224300 Rhododendron simsii HOM05D000146 ORTHO05D002110 5.5e-07 57.8 55 58.2
Sabra01G0012900 Salix brachista HOM05D000146 ORTHO05D002110 5.5e-07 57.8 55 58.2
Sed0015575 Sechium edule HOM05D000146 ORTHO05D002110 5.5e-07 57.8 55 60.0
BcaC05g28273 Brassica carinata HOM05D000146 ORTHO05D002110 7.2e-07 57.4 55 58.2
C05p43240 Brassica napus HOM05D000146 ORTHO05D002110 7.2e-07 57.4 55 58.2
BolC5t33054H Brassica oleracea HOM05D000146 ORTHO05D002110 7.2e-07 57.4 55 58.2
Duzib168G1722 Durio zibethinus HOM05D000146 ORTHO05D002110 7.2e-07 57.4 55 56.4
Thhalv10011554m.g Eutrema salsugineum HOM05D000146 ORTHO05D002110 7.2e-07 57.4 55 58.2
Gorai.004G018700 Gossypium raimondii HOM05D000146 ORTHO05D002110 7.2e-07 57.4 55 56.4
Psat5g221800 Pisum sativum HOM05D000146 ORTHO05D002110 7.2e-07 57.4 55 58.2
TPR.G6875 Trifolium pratense HOM05D000146 ORTHO05D002110 7.2e-07 57.4 55 54.5
Ah.06g193600 Amaranthus hybridus HOM05D000146 ORTHO05D002110 9.4e-07 57.0 55 54.5
arahy.Tifrunner.gnm1.ann1.Y5C6DK Arachis hypogaea HOM05D000146 ORTHO05D002110 9.4e-07 57.0 55 56.4
ECA233G1081 Erigeron canadensis HOM05D000146 ORTHO05D002110 9.4e-07 57.0 55 56.4
Gohir.A08G013000 Gossypium hirsutum HOM05D000146 ORTHO05D002110 9.4e-07 57.0 55 54.5
Lalb_Chr22g0352301 Lupinus albus HOM05D000146 ORTHO05D002110 9.4e-07 57.0 55 54.5
Sp1g37910 Schrenkiella parvula HOM05D000146 ORTHO05D002110 9.4e-07 57.0 55 58.2
PGSC0003DMG400021034 Solanum tuberosum HOM05D000146 ORTHO05D002110 9.4e-07 57.0 55 54.5
EL10Ac4g10302 Beta vulgaris HOM05D000146 ORTHO05D002110 1.2e-06 56.6 55 54.5
BraA06t23469Z Brassica rapa HOM05D000146 ORTHO05D002110 1.2e-06 56.6 55 58.2
Ca_20575_v3 Cicer arietinum L. HOM05D000146 ORTHO05D002110 1.2e-06 56.6 55 54.5
ClCG02G023400 Citrullus lanatus HOM05D000146 ORTHO05D002110 1.2e-06 56.6 55 58.2
MELO3C014610.2 Cucumis melo HOM05D000146 ORTHO05D002110 1.2e-06 56.6 55 58.2
Psat5g287680 Pisum sativum HOM05D000146 ORTHO05D002110 1.2e-06 56.6 55 54.5
BcaC08g43290 Brassica carinata HOM05D000146 ORTHO05D002110 1.6e-06 56.2 55 58.2
A06p02620 Brassica napus HOM05D000146 ORTHO05D002110 1.6e-06 56.2 55 58.2
C06p06400 Brassica napus HOM05D000146 ORTHO05D002110 1.6e-06 56.2 55 58.2
BolC6t35750H Brassica oleracea HOM05D000146 ORTHO05D002110 1.6e-06 56.2 55 58.2
Gorai.009G072200 Gossypium raimondii HOM05D000146 ORTHO05D002110 2.1e-06 55.8 55 56.4
Lsat_1_v5_gn_6_48420 Lactuca sativa HOM05D000146 ORTHO05D002110 2.1e-06 55.8 55 49.1
MBI04_g13616_MAGBIO Magnolia biondii HOM05D000146 ORTHO05D002110 2.1e-06 55.8 55 52.7
THA.LOC104811144 Tarenaya hassleriana HOM05D000146 ORTHO05D002110 2.1e-06 55.8 55 52.7
Aa31LG10G3460 Aethionema arabicum HOM05D000146 ORTHO05D002110 2.7e-06 55.5 55 56.4
A05p27910 Brassica napus HOM05D000146 ORTHO05D002110 2.7e-06 55.5 55 56.4
Ca_01283_v3 Cicer arietinum L. HOM05D000146 ORTHO05D002110 2.7e-06 55.5 55 54.5
Duzib170G0438 Durio zibethinus HOM05D000146 ORTHO05D002110 2.7e-06 55.5 56 53.6
Medtr2g098240 Medicago truncatula HOM05D000146 ORTHO05D002110 2.7e-06 55.5 55 56.4
Ah.04g161830 Amaranthus hybridus HOM05D000146 ORTHO05D002110 4.7e-06 54.7 48 58.3
BcaB07g33564 Brassica carinata HOM05D000146 ORTHO05D002110 4.7e-06 54.7 55 58.2
AUR62019265 Chenopodium quinoa HOM05D000146 ORTHO05D002110 4.7e-06 54.7 55 50.9
Migut.D00573 Erythranthe guttata HOM05D000146 ORTHO05D002110 4.7e-06 54.7 55 50.9
Gohir.A05G068200 Gossypium hirsutum HOM05D000146 ORTHO05D002110 4.7e-06 54.7 55 54.5
BraA05t21678Z Brassica rapa HOM05D000146 ORTHO05D002110 6.1e-06 54.3 55 56.4
CsaV3_4G024110 Cucumis sativus L. HOM05D000146 ORTHO05D002110 6.1e-06 54.3 55 56.4
HanXRQChr13g0403961 Helianthus annuus HOM05D000146 ORTHO05D002110 6.1e-06 54.3 55 49.1
Oeu046661.1 Olea europaea HOM05D000146 ORTHO05D002110 6.1e-06 54.3 55 49.1
Oeu046662.1 Olea europaea HOM05D000146 ORTHO05D002110 6.1e-06 54.3 55 49.1
Duzib150G0672 Durio zibethinus HOM05D000146 ORTHO05D002110 8.0e-06 53.9 55 52.7


User provided reference genes

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