Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv02496 Davidia involucrata HOM05D001549 ORTHO05D005557 1.6e-61 239.2 115 100.0
TAR629G1676 Trochodendron aralioides HOM05D001549 ORTHO05D005557 3.0e-36 155.2 94 76.6
Actinidia04366 Actinidia chinensis HOM05D001549 ORTHO05D005557 3.9e-36 154.8 101 74.3
Nn4g25180 Nelumbo nucifera HOM05D001549 ORTHO05D005557 1.9e-35 152.5 94 73.4
Peaxi162Scf00080g01316 Petunia axillaris HOM05D004929 ORTHO05D005557 1.3e-34 149.8 100 70.0
Lj3C845T4 Lonicera japonica HOM05D001549 ORTHO05D005557 1.6e-34 149.4 100 70.0
Lsat_1_v5_gn_6_17661 Lactuca sativa HOM05D001549 ORTHO05D005557 2.1e-34 149.1 103 69.9
GSVIVG01034359001 Vitis vinifera HOM05D001549 ORTHO05D005557 2.8e-34 148.7 105 68.6
MD16G1004600 Malus domestica HOM05D001549 ORTHO05D005557 3.7e-34 148.3 96 71.9
CiPaw.15G000600 Carya illinoinensis HOM05D001549 ORTHO05D005557 6.2e-34 147.5 103 66.0
DCAR_026873 Daucus carota HOM05D001549 ORTHO05D005557 1.1e-33 146.7 97 71.1
HanXRQChr17g0558111 Helianthus annuus HOM05D001549 ORTHO05D005557 1.1e-33 146.7 97 72.2
Potri.007G001300 Populus trichocarpa HOM05D001549 ORTHO05D005557 1.1e-33 146.7 102 66.7
AL1G58024 Arabidopsis lyrata HOM05D001549 ORTHO05D005557 1.4e-33 146.4 97 70.1
Gohir.A04G109500 Gossypium hirsutum HOM05D001549 ORTHO05D005557 1.8e-33 146.0 106 66.0
RcHm_v2.0_Chr4g0447131 Rosa chinensis HOM05D001549 ORTHO05D005557 1.8e-33 146.0 95 70.5
Duzib132G0881 Durio zibethinus HOM05D001549 ORTHO05D005557 2.4e-33 145.6 102 66.7
Migut.L00788 Erythranthe guttata HOM05D001549 ORTHO05D005557 2.4e-33 145.6 96 68.8
ECA233G5707 Erigeron canadensis HOM05D001549 ORTHO05D005557 4.0e-33 144.8 99 68.7
Migut.L00842 Erythranthe guttata HOM05D001549 ORTHO05D005557 4.0e-33 144.8 92 69.6
AT1G50380 Arabidopsis thaliana HOM05D001549 ORTHO05D005557 6.9e-33 144.1 97 68.0
Gohir.D04G149700 Gossypium hirsutum HOM05D001549 ORTHO05D005557 6.9e-33 144.1 106 65.1
Gorai.012G136300 Gossypium raimondii HOM05D001549 ORTHO05D005557 6.9e-33 144.1 106 65.1
Prupe.1G351000 Prunus persica HOM05D001549 ORTHO05D005557 9.0e-33 143.7 90 73.3
Sc25g0001420 Simmondsia chinensis HOM05D001549 ORTHO05D005557 9.0e-33 143.7 102 66.7
ECA233G6260 Erigeron canadensis HOM05D001549 ORTHO05D005557 1.2e-32 143.3 92 72.8
CSS0047743 Camellia sinensis var. sinensis HOM05D001549 ORTHO05D005557 1.5e-32 142.9 93 74.2
CAN.G739.7 Capsicum annuum HOM05D001549 ORTHO05D005557 1.5e-32 142.9 103 66.0
MBI03_g13443_MAGBIO Magnolia biondii HOM05D001549 ORTHO05D005557 1.5e-32 142.9 102 67.6
Rhsim12G0073200 Rhododendron simsii HOM05D001549 ORTHO05D005557 2.0e-32 142.5 92 71.7
Carub.0001s3946 Capsella rubella HOM05D001549 ORTHO05D005557 2.6e-32 142.1 97 67.0
BcaB04g17256 Brassica carinata HOM05D001549 ORTHO05D005557 3.4e-32 141.7 94 69.1
CARHR040400 Cardamine hirsuta HOM05D001549 ORTHO05D005557 3.4e-32 141.7 97 68.0
Phvul.007G012500 Phaseolus vulgaris HOM05D001549 ORTHO05D005557 3.4e-32 141.7 97 68.0
Psat6g235720 Pisum sativum HOM05D001549 ORTHO05D005557 3.4e-32 141.7 92 69.6
Aqoxy5G00260 Aquilegia oxysepala HOM05D001549 ORTHO05D005557 4.5e-32 141.4 86 75.6
Nitab4.5_0000146g0180 Nicotiana tabacum HOM05D001549 ORTHO05D005557 4.5e-32 141.4 94 71.3
PGR142G2256 Punica granatum HOM05D001549 ORTHO05D005557 5.8e-32 141.0 102 64.7
QL01p000526 Quercus lobata HOM05D001549 ORTHO05D005557 5.8e-32 141.0 102 63.7
TWI53G1100 Tripterygium wilfordii HOM05D001549 ORTHO05D005557 5.8e-32 141.0 96 67.7
Sabra07G0001000 Salix brachista HOM05D001549 ORTHO05D005557 7.6e-32 140.6 102 61.8
Cfa018671 Carpinus fangiana HOM05D001549 ORTHO05D005557 1.0e-31 140.2 102 63.7
MELO3C011764.2 Cucumis melo HOM05D001549 ORTHO05D005557 1.0e-31 140.2 99 64.6
Thhalv10011253m.g Eutrema salsugineum HOM05D001549 ORTHO05D005557 1.0e-31 140.2 97 67.0
Lj5g0017773 Lotus japonicus HOM05D001549 ORTHO05D005557 1.0e-31 140.2 97 64.9
MBI03_g13442_MAGBIO Magnolia biondii HOM05D001549 ORTHO05D005557 1.0e-31 140.2 102 65.7
Nitab4.5_0003448g0010 Nicotiana tabacum HOM05D001549 ORTHO05D005557 1.0e-31 140.2 91 72.5
Prupe.1G351200 Prunus persica HOM05D001549 ORTHO05D005557 1.0e-31 140.2 90 71.1
FvH4_4g37301 Fragaria vesca HOM05D001549 ORTHO05D005557 1.3e-31 139.8 105 63.8
Lalb_Chr02g0144131 Lupinus albus HOM05D001549 ORTHO05D005557 1.3e-31 139.8 101 65.3
PSO017G4045 Papaver somniferum HOM05D001549 ORTHO05D005557 1.3e-31 139.8 93 69.9
EL10Ac9g23012 Beta vulgaris HOM05D001549 ORTHO05D005557 1.7e-31 139.4 103 61.2
Haze_17399 Corylus avellana HOM05D001549 ORTHO05D005557 1.7e-31 139.4 102 63.7
CsaV3_5G029120 Cucumis sativus L. HOM05D001549 ORTHO05D005557 1.7e-31 139.4 99 64.6
PSO170G0691 Papaver somniferum HOM05D001549 ORTHO05D005557 1.7e-31 139.4 94 68.1
Solyc02g050240.4 Solanum lycopersicum HOM05D001549 ORTHO05D005557 1.7e-31 139.4 105 63.8
VMungo0720G2183 Vigna mungo HOM05D001549 ORTHO05D005557 1.7e-31 139.4 97 67.0
SalBow1G1414 Salvia bowleyana HOM05D001549 ORTHO05D005557 2.2e-31 139.0 99 65.7
Sopen02g008530 Solanum pennellii HOM05D001549 ORTHO05D005557 2.2e-31 139.0 105 63.8
Ah.01g011570 Amaranthus hybridus HOM05D001549 ORTHO05D005557 2.9e-31 138.7 99 67.7
Cc11_g04170 Coffea canephora HOM05D001549 ORTHO05D005557 2.9e-31 138.7 106 66.0
Ca_11276_v3 Cicer arietinum L. HOM05D001549 ORTHO05D005557 3.8e-31 138.3 103 63.1
Eucgr.G02608 Eucalyptus grandis HOM05D001549 ORTHO05D005557 3.8e-31 138.3 102 64.7
Hund05502 Selenicereus undatus HOM05D001549 ORTHO05D005557 3.8e-31 138.3 86 73.3
BcaC01g01225 Brassica carinata HOM05D001549 ORTHO05D005557 4.9e-31 137.9 94 68.1
A08p03180 Brassica napus HOM05D001549 ORTHO05D005557 4.9e-31 137.9 94 68.1
BolC3t21274H Brassica oleracea HOM05D001549 ORTHO05D005557 4.9e-31 137.9 94 68.1
BraA08t32351Z Brassica rapa HOM05D001549 ORTHO05D005557 4.9e-31 137.9 94 68.1
SalBow2G1760 Salvia bowleyana HOM05D001549 ORTHO05D005557 4.9e-31 137.9 95 68.4
Sp1g37210 Schrenkiella parvula HOM05D001549 ORTHO05D005557 4.9e-31 137.9 97 64.9
Cpa.g.sc221.18 Carica papaya HOM05D001549 ORTHO05D005557 6.5e-31 137.5 94 66.0
AUR62032901 Chenopodium quinoa HOM05D001549 ORTHO05D005557 6.5e-31 137.5 91 65.9
Glyma.20G100400 Glycine max HOM05D001549 ORTHO05D005557 6.5e-31 137.5 103 62.1
Sed0013808 Sechium edule HOM05D001549 ORTHO05D005557 8.4e-31 137.1 99 62.6
THA.LOC104815249 Tarenaya hassleriana HOM05D001549 ORTHO05D005557 8.4e-31 137.1 94 67.0
TPR.G4142 Trifolium pratense HOM05D001549 ORTHO05D005557 8.4e-31 137.1 92 67.4
Aa31LG10G3900 Aethionema arabicum HOM05D001549 ORTHO05D005557 1.1e-30 136.7 94 68.1
vmacro16217 Vaccinium macrocarpon HOM05D001549 ORTHO05D005557 1.9e-30 136.0 124 55.6
ATR0124G037 Amborella trichopoda HOM05D001549 ORTHO05D005557 2.5e-30 135.6 89 69.7
A06p03180 Brassica napus HOM05D001549 ORTHO05D005557 2.5e-30 135.6 94 66.0
C06p05570 Brassica napus HOM05D001549 ORTHO05D005557 2.5e-30 135.6 102 62.7
BolC6t35663H Brassica oleracea HOM05D001549 ORTHO05D005557 2.5e-30 135.6 102 62.7
C03p89610 Brassica napus HOM05D001549 ORTHO05D005557 3.2e-30 135.2 94 67.0
Lalb_Chr21g0307441 Lupinus albus HOM05D001549 ORTHO05D005557 9.3e-30 133.7 98 63.3
Manes.04G161300 Manihot esculenta HOM05D001549 ORTHO05D005557 9.3e-30 133.7 97 63.9
arahy.Tifrunner.gnm1.ann1.9J2F9Q Arachis hypogaea HOM05D001549 ORTHO05D005557 1.2e-29 133.3 90 66.7
arahy.Tifrunner.gnm1.ann1.UW2LYQ Arachis hypogaea HOM05D001549 ORTHO05D005557 1.2e-29 133.3 90 66.7
BraA06t23529Z Brassica rapa HOM05D001549 ORTHO05D005557 1.2e-29 133.3 94 64.9
ATR0124G045 Amborella trichopoda HOM05D001549 ORTHO05D005557 2.7e-29 132.1 100 61.0
MSTRG.425 Avicennia marina HOM05D001549 ORTHO05D005557 4.6e-29 131.3 92 66.3
CANSAT78G2104 Cannabis sativa HOM05D001549 ORTHO05D005557 4.6e-29 131.3 95 66.3
Manes.11G000600 Manihot esculenta HOM05D001549 ORTHO05D005557 4.6e-29 131.3 103 62.1
HPP92_022058 Vanilla planifolia HOM05D001549 ORTHO05D005557 4.6e-29 131.3 97 62.9
QL01p000406 Quercus lobata HOM05D001549 ORTHO05D005557 7.9e-29 130.6 91 64.8
ClCG11G012740 Citrullus lanatus HOM05D001549 ORTHO05D005557 1.3e-28 129.8 114 56.1
Eucgr.G02611 Eucalyptus grandis HOM05D001549 ORTHO05D005557 1.3e-28 129.8 102 59.8
Atru.chr11.48 Acer truncatum HOM05D001549 ORTHO05D005557 1.8e-28 129.4 97 60.8
GSVIVG01034358001 Vitis vinifera HOM05D001549 ORTHO05D005557 3.0e-28 128.6 82 72.0
Atru.chr11.52 Acer truncatum HOM05D001549 ORTHO05D005557 1.1e-27 126.7 90 63.3
Zm00001eb271750 Zea mays HOM05D001549 ORTHO05D005557 1.5e-27 126.3 93 66.7
Ciclev10014380m.g Citrus clementina HOM05D001549 ORTHO05D005557 4.3e-27 124.8 103 58.3
SGA_v2.0_scaffold46G17331 Striga asiatica HOM05D001549 ORTHO05D005557 3.7e-26 121.7 80 68.8
Os06g0730600 Oryza sativa ssp. japonica HOM05D001549 ORTHO05D005557 8.2e-26 120.6 92 63.0
CDE04G0096 Ceratophyllum demersum HOM05D001549 ORTHO05D005557 2.4e-25 119.0 91 58.2
Aqoxy3G00003 Aquilegia oxysepala HOM05D001549 ORTHO05D005557 4.1e-25 118.2 74 73.0
AagrBONN_evm.TU.Sc2ySwM_117.1347 Anthoceros agrestis HOM05D001549 ORTHO05D005557 1.0e-23 113.6 92 56.5
Pp3c6_15290 Physcomitrium patens HOM05D001549 ORTHO05D005557 3.8e-23 111.7 92 51.1
Mapoly0011s0194 Marchantia polymorpha HOM05D001549 ORTHO05D005557 1.9e-22 109.4 91 52.7
SHI21178 Sapria himalayana HOM05D001549 ORTHO05D005557 1.0e-20 103.6 145 41.4
SMO146G0169 Selaginella moellendorffii HOM05D001549 ORTHO05D005557 3.9e-20 101.7 92 52.2
FAN17G2050 Fragaria x ananassa HOM05D001549 ORTHO05D005557 2.5e-19 99.0 94 52.1
COL.COLO4_33142 Corchorus olitorius HOM05D001549 ORTHO05D005557 1.3e-18 96.7 60 70.0
Peaxi162Scf00900g00016 Petunia axillaris HOM05D001549 ORTHO05D005557 2.8e-18 95.5 103 51.5
CAN.G1507.3 Capsicum annuum HOM05D000541 ORTHO05D000137 2.4e-17 92.4 49 79.6
DCAR_026867 Daucus carota HOM05D001549 ORTHO05D005557 2.4e-17 92.4 57 73.7
CBR_g41177 Chara braunii HOM05D000019 ORTHO05D000002 5.3e-17 91.3 83 50.6
Ciclev10018222m.g Citrus clementina HOM05D001549 ORTHO05D005557 1.2e-16 90.1 82 52.4
Cre17.g697650 Chlamydomonas reinhardtii HOM05D001549 ORTHO05D005557 2.9e-15 85.5 78 50.0
QL01p000509 Quercus lobata HOM05D001549 ORTHO05D005557 2.0e-11 72.8 58 56.9
HPP92_022044 Vanilla planifolia HOM05D001549 ORTHO05D005557 1.7e-10 69.7 41 73.2
MCO13G269 Micromonas commoda HOM05D001549 ORTHO05D005557 1.1e-09 67.0 101 36.6
CSS0019717 Camellia sinensis var. sinensis HOM05D001549 ORTHO05D005557 1.8e-09 66.2 48 64.6
Pp3c5_13200 Physcomitrium patens HOM05D001549 ORTHO05D005557 6.9e-09 64.3 51 52.9
QL02p030564 Quercus lobata HOM05D001549 ORTHO05D005557 2.0e-08 62.8 101 36.6
CARHR061890 Cardamine hirsuta HOM05D001549 ORTHO05D003098 1.7e-07 59.7 82 35.4
AT1G69020 Arabidopsis thaliana HOM05D001549 ORTHO05D003098 5.0e-07 58.2 85 31.8
PGR102G1965 Punica granatum HOM05D001549 ORTHO05D003098 5.0e-07 58.2 89 33.7
TWI75G1409 Tripterygium wilfordii HOM05D001549 ORTHO05D003098 8.5e-07 57.4 85 34.1
Cre16.g650625 Chlamydomonas reinhardtii HOM05D001549 ORTHO05D142159 1.4e-06 56.6 62 37.1
PSO017G3096 Papaver somniferum HOM05D001549 ORTHO05D003098 2.5e-06 55.8 89 33.7
AL2G28070 Arabidopsis lyrata HOM05D001549 ORTHO05D003098 4.2e-06 55.1 82 34.1
Glyma.02G123100 Glycine max HOM05D001549 ORTHO05D003098 4.2e-06 55.1 85 32.9
DCAR_030063 Daucus carota HOM05D001549 ORTHO05D003098 5.5e-06 54.7 80 33.8
Glyma.01G065500 Glycine max HOM05D001549 ORTHO05D003098 5.5e-06 54.7 105 29.5
Migut.L01160 Erythranthe guttata HOM05D001549 ORTHO05D003098 7.2e-06 54.3 93 33.3


User provided reference genes

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