Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv02470 Davidia involucrata HOM05D006901 ORTHO05D008582 4.5e-86 321.2 165 100.0
CSS0011226 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 3.7e-56 221.9 164 73.8
CSS0025966 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 3.7e-56 221.9 164 73.8
Actinidia17766 Actinidia chinensis HOM05D006901 ORTHO05D008582 1.9e-55 219.5 164 72.6
Hma1.2p1_0678F.1_g202120 Hydrangea macrophylla HOM05D006901 ORTHO05D008582 7.0e-55 217.6 165 72.1
Nitab4.5_0003443g0040 Nicotiana tabacum HOM05D006901 ORTHO05D008582 1.8e-50 203.0 165 69.1
Nitab4.5_0003178g0070 Nicotiana tabacum HOM05D006901 ORTHO05D008582 3.1e-50 202.2 165 67.9
Sopen04g028100 Solanum pennellii HOM05D006901 ORTHO05D008582 3.4e-49 198.7 165 66.7
Solyc04g072038.1 Solanum lycopersicum HOM05D006901 ORTHO05D008582 4.4e-49 198.4 165 66.7
PGSC0003DMG400025056 Solanum tuberosum HOM05D006901 ORTHO05D008582 9.8e-49 197.2 165 65.5
Cc10_g06470 Coffea canephora HOM05D006901 ORTHO05D008582 1.7e-48 196.4 165 65.5
TAR376G0851 Trochodendron aralioides HOM05D006901 ORTHO05D008582 8.3e-48 194.1 178 62.4
CiPaw.16G007900 Carya illinoinensis HOM05D006901 ORTHO05D008582 4.1e-47 191.8 175 64.0
Duzib041G0277 Durio zibethinus HOM05D006901 ORTHO05D008582 3.5e-46 188.7 175 62.9
Haze_17820 Corylus avellana HOM05D006901 ORTHO05D008582 3.0e-45 185.7 181 59.7
Peaxi162Scf00360g00917 Petunia axillaris HOM05D006901 ORTHO05D008582 3.0e-45 185.7 155 65.2
Nn5g28858 Nelumbo nucifera HOM05D006901 ORTHO05D008582 5.6e-44 181.4 178 61.2
Actinidia15615 Actinidia chinensis HOM05D006901 ORTHO05D008582 1.2e-43 180.3 144 68.8
CAN.G1183.19 Capsicum annuum HOM05D006901 ORTHO05D008582 2.8e-43 179.1 166 61.4
Rhsim06G0092600 Rhododendron simsii HOM05D006901 ORTHO05D008582 3.1e-42 175.6 173 63.6
MSTRG.22112 Avicennia marina HOM05D006901 ORTHO05D008582 1.2e-41 173.7 165 58.8
MD10G1037700 Malus domestica HOM05D006901 ORTHO05D008582 1.5e-41 173.3 176 58.0
Duzib116G0108 Durio zibethinus HOM05D006901 ORTHO05D008582 2.0e-41 172.9 175 59.4
GSVIVG01013704001 Vitis vinifera HOM05D006901 ORTHO05D008582 2.0e-41 172.9 171 59.6
Gohir.D06G116100 Gossypium hirsutum HOM05D006901 ORTHO05D008582 2.6e-41 172.6 172 59.3
Gorai.010G133900 Gossypium raimondii HOM05D006901 ORTHO05D008582 2.6e-41 172.6 172 59.3
Manes.18G095700 Manihot esculenta HOM05D006901 ORTHO05D008582 1.3e-40 170.2 186 57.5
Potri.002G063100 Populus trichocarpa HOM05D006901 ORTHO05D008582 2.2e-40 169.5 182 56.0
Potri.005G198100 Populus trichocarpa HOM05D006901 ORTHO05D008582 6.4e-40 167.9 182 55.5
Sabra05G0150900 Salix brachista HOM05D006901 ORTHO05D008582 2.4e-39 166.0 179 54.7
Prupe.8G043100 Prunus persica HOM05D006901 ORTHO05D008582 3.2e-39 165.6 180 57.2
Oeu017620.1 Olea europaea HOM05D006901 ORTHO05D008582 7.1e-39 164.5 157 58.0
Thecc.08G162300 Theobroma cacao HOM05D006901 ORTHO05D008582 7.1e-39 164.5 175 58.3
CANSAT25G0969 Cannabis sativa HOM05D006901 ORTHO05D008582 2.7e-38 162.5 180 56.1
Gohir.A06G111900 Gossypium hirsutum HOM05D006901 ORTHO05D008582 2.7e-38 162.5 156 60.3
Nn6g32189 Nelumbo nucifera HOM05D006901 ORTHO05D008582 3.5e-38 162.2 178 56.2
MD05G1035400 Malus domestica HOM05D006901 ORTHO05D008582 1.3e-37 160.2 179 55.9
SalBow7G3034 Salvia bowleyana HOM05D006901 ORTHO05D008582 1.3e-37 160.2 165 54.5
HanXRQChr02g0041271 Helianthus annuus HOM05D006901 ORTHO05D008582 2.3e-37 159.5 169 56.8
Sabra02G0050800 Salix brachista HOM05D006901 ORTHO05D008582 8.6e-37 157.5 182 53.3
CSS0012150 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 3.3e-36 155.6 165 57.6
Ah.16g108540 Amaranthus hybridus HOM05D006901 ORTHO05D008582 4.3e-36 155.2 170 54.1
QL02p037117 Quercus lobata HOM05D006901 ORTHO05D008582 7.3e-36 154.5 164 58.5
QL02p036605 Quercus lobata HOM05D006901 ORTHO05D008582 9.6e-36 154.1 170 58.8
EL10Ac1g01620 Beta vulgaris HOM05D006901 ORTHO05D008582 2.8e-35 152.5 175 56.0
Lsat_1_v5_gn_1_5120 Lactuca sativa HOM05D006901 ORTHO05D008582 3.6e-35 152.1 165 55.2
Duzib093G0981 Durio zibethinus HOM05D006901 ORTHO05D008582 8.1e-35 151.0 171 56.1
Cpa.g.sc26.114 Carica papaya HOM05D006901 ORTHO05D008582 2.4e-34 149.4 187 52.4
Sc02g0003760 Simmondsia chinensis HOM05D006901 ORTHO05D008582 5.2e-34 148.3 172 55.2
Ciclev10002626m.g Citrus clementina HOM05D006901 ORTHO05D008582 7.6e-33 144.4 187 54.5
PSO541G2877 Papaver somniferum HOM05D006901 ORTHO05D008582 9.9e-33 144.1 169 55.0
PSO675G2506 Papaver somniferum HOM05D006901 ORTHO05D008582 2.2e-32 142.9 169 53.8
SGA_v2.0_scaffold82G26198 Striga asiatica HOM05D006901 ORTHO05D008582 2.2e-32 142.9 167 56.3
EL10Ac4g07716 Beta vulgaris HOM05D006901 ORTHO05D008582 2.9e-32 142.5 165 55.8
Lalb_Chr21g0305611 Lupinus albus HOM05D006901 ORTHO05D008582 4.9e-32 141.7 172 52.9
SalBow8G2041 Salvia bowleyana HOM05D006901 ORTHO05D008582 6.4e-32 141.4 141 55.3
TWI60G0595 Tripterygium wilfordii HOM05D006901 ORTHO05D008582 6.4e-32 141.4 120 65.8
FvH4_2g12890 Fragaria vesca HOM05D006901 ORTHO05D008582 8.4e-32 141.0 166 58.4
FAN24G1802 Fragaria x ananassa HOM05D006901 ORTHO05D008582 8.4e-32 141.0 166 58.4
PGR042G3646 Punica granatum HOM05D006901 ORTHO05D008582 8.4e-32 141.0 181 53.0
EL10Ac1g01617 Beta vulgaris HOM05D006901 ORTHO05D008582 1.1e-31 140.6 165 55.2
FAN27G3188 Fragaria x ananassa HOM05D006901 ORTHO05D008582 1.4e-31 140.2 166 58.4
Atru.chr13.1989 Acer truncatum HOM05D006901 ORTHO05D008582 1.9e-31 139.8 169 53.3
THA.LOC104810483 Tarenaya hassleriana HOM05D006901 ORTHO05D008582 1.9e-31 139.8 173 53.2
TPR.G792 Trifolium pratense HOM05D006901 ORTHO05D008582 3.2e-31 139.0 172 52.9
FAN15G3138 Fragaria x ananassa HOM05D006901 ORTHO05D008582 5.4e-31 138.3 166 57.8
FAN20G0005 Fragaria x ananassa HOM05D006901 ORTHO05D008582 5.4e-31 138.3 166 57.8
Medtr1g097570 Medicago truncatula HOM05D006901 ORTHO05D008582 5.4e-31 138.3 172 52.3
Glyma.20G171000 Glycine max HOM05D006901 ORTHO05D008582 7.1e-31 137.9 171 50.3
unitig_32.g11111 Utricularia gibba HOM05D006901 ORTHO05D008582 9.3e-31 137.5 167 50.9
Phvul.007G084500 Phaseolus vulgaris HOM05D006901 ORTHO05D008582 2.1e-30 136.3 158 55.7
ECA247G1717 Erigeron canadensis HOM05D006901 ORTHO05D008582 3.5e-30 135.6 91 75.8
Lj7E386T0 Lonicera japonica HOM05D006901 ORTHO05D008582 3.5e-30 135.6 91 78.0
TWI34G1320 Tripterygium wilfordii HOM05D006901 ORTHO05D008582 6.0e-30 134.8 138 60.1
Lj5g0019877 Lotus japonicus HOM05D006901 ORTHO05D008582 7.8e-30 134.4 172 48.3
Psat6g189960 Pisum sativum HOM05D006901 ORTHO05D008582 1.0e-29 134.0 154 54.5
RcHm_v2.0_Chr6g0273991 Rosa chinensis HOM05D006901 ORTHO05D008582 1.0e-29 134.0 169 54.4
arahy.Tifrunner.gnm1.ann1.YZ7MCJ Arachis hypogaea HOM05D006901 ORTHO05D008582 1.7e-29 133.3 169 53.3
Glyma.10G220600 Glycine max HOM05D006901 ORTHO05D008582 1.7e-29 133.3 172 50.0
Ca_10653_v3 Cicer arietinum L. HOM05D006901 ORTHO05D008582 2.3e-29 132.9 172 50.0
Aa31LG4G8920 Aethionema arabicum HOM05D006901 ORTHO05D008582 3.0e-29 132.5 154 55.8
PGR102G0180 Punica granatum HOM05D006901 ORTHO05D008582 3.0e-29 132.5 181 51.4
AL2G31300 Arabidopsis lyrata HOM05D006901 ORTHO05D008582 5.1e-29 131.7 174 51.1
AT1G71730 Arabidopsis thaliana HOM05D006901 ORTHO05D008582 6.6e-29 131.3 110 64.5
arahy.Tifrunner.gnm1.ann1.96Y3Q8 Arachis hypogaea HOM05D006901 ORTHO05D008582 8.7e-29 131.0 169 52.7
ClCG08G007260 Citrullus lanatus HOM05D006901 ORTHO05D008582 1.1e-28 130.6 86 79.1
ATR1120G022 Amborella trichopoda HOM05D006901 ORTHO05D008582 1.5e-28 130.2 112 63.4
Carub.0002s1849 Capsella rubella HOM05D006901 ORTHO05D008582 1.9e-28 129.8 158 51.9
CARHR291060 Cardamine hirsuta HOM05D006901 ORTHO05D008582 4.3e-28 128.6 115 60.9
MELO3C019969.2 Cucumis melo HOM05D006901 ORTHO05D008582 4.3e-28 128.6 164 51.8
Thhalv10019220m.g Eutrema salsugineum HOM05D006901 ORTHO05D008582 5.6e-28 128.3 156 51.3
Sp5g26760 Schrenkiella parvula HOM05D006901 ORTHO05D008582 1.3e-27 127.1 184 46.7
SEGI_14424 Sequoiadendron giganteum HOM05D006901 ORTHO05D008582 1.3e-27 127.1 105 65.7
VMungo0720G0575 Vigna mungo HOM05D006901 ORTHO05D008582 1.3e-27 127.1 157 52.2
A07p37880 Brassica napus HOM05D006901 ORTHO05D008582 2.1e-27 126.3 121 59.5
BraA07t31353Z Brassica rapa HOM05D006901 ORTHO05D008582 2.1e-27 126.3 121 59.5
Eucgr.F02679 Eucalyptus grandis HOM05D006901 ORTHO05D008582 2.8e-27 125.9 178 47.8
Sed0007149 Sechium edule HOM05D006901 ORTHO05D008582 3.6e-27 125.6 145 53.8
BcaC08g46599 Brassica carinata HOM05D006901 ORTHO05D008582 4.8e-27 125.2 86 73.3
C06p45780 Brassica napus HOM05D006901 ORTHO05D008582 4.8e-27 125.2 86 73.3
BolC6t39630H Brassica oleracea HOM05D006901 ORTHO05D008582 4.8e-27 125.2 86 73.3
HPP92_002808 Vanilla planifolia HOM05D006901 ORTHO05D008582 1.1e-26 124.0 87 73.6
HPP92_002865 Vanilla planifolia HOM05D006901 ORTHO05D008582 1.1e-26 124.0 87 73.6
CsaV3_6G004930 Cucumis sativus L. HOM05D006901 ORTHO05D008582 1.8e-26 123.2 86 74.4
CSS0007119 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 3.1e-26 122.5 114 61.4
AagrBONN_evm.TU.Sc2ySwM_228.5132 Anthoceros agrestis HOM05D006901 ORTHO05D008582 2.2e-24 116.3 93 66.7
Lj5g0009364 Lotus japonicus HOM05D006901 ORTHO05D008582 1.1e-23 114.0 172 45.3
Pp3c17_20520 Physcomitrium patens HOM05D006901 ORTHO05D008582 3.0e-21 105.9 80 65.0
SMO351G0406 Selaginella moellendorffii HOM05D006901 ORTHO05D008582 1.9e-20 103.2 83 63.9
Os05g0182000 Oryza sativa ssp. japonica HOM05D006901 ORTHO05D008582 3.3e-20 102.4 83 63.9
DCAR_001194 Daucus carota HOM05D006901 ORTHO05D008582 1.3e-19 100.5 65 76.9
Zm00001eb346910 Zea mays HOM05D006901 ORTHO05D008582 1.6e-19 100.1 88 59.1
CSS0023453 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 1.2e-17 94.0 92 59.8
CBR_g54341 Chara braunii HOM05D006901 ORTHO05D008582 9.9e-17 90.9 84 54.8
MCO05G280 Micromonas commoda HOM05D006901 ORTHO05D008582 1.0e-13 80.9 84 50.0
Cre03.g176500 Chlamydomonas reinhardtii HOM05D006901 ORTHO05D008582 2.8e-11 72.8 158 35.4
Ah.08g214420 Amaranthus hybridus HOM05D006901 ORTHO05D008582 1.5e-09 67.0 73 52.1


User provided reference genes

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