Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv02264 Davidia involucrata HOM05D000040 ORTHO05D185610 3.5e-71 271.6 142 100.0
Dinv41184 Davidia involucrata HOM05D000040 ORTHO05D004411 7.7e-18 94.4 111 49.5
Dinv02263 Davidia involucrata HOM05D000040 ORTHO05D004411 5.2e-14 81.6 116 47.4
Dinv02268 Davidia involucrata HOM05D000040 ORTHO05D004411 5.2e-14 81.6 116 47.4
Rhsim11G0054600 Rhododendron simsii HOM05D000040 ORTHO05D004411 1.0e-09 67.4 115 38.3
GSVIVG01010876001 Vitis vinifera HOM05D000040 ORTHO05D004411 2.3e-09 66.2 105 36.2
CsaV3_1G031830 Cucumis sativus L. HOM05D000040 ORTHO05D004411 5.0e-09 65.1 109 34.9
QL09p044042 Quercus lobata HOM05D000040 ORTHO05D004411 5.0e-09 65.1 80 41.2
QL09p044227 Quercus lobata HOM05D000040 ORTHO05D004411 6.6e-09 64.7 76 43.4
MELO3C017436.2 Cucumis melo HOM05D000040 ORTHO05D004411 8.6e-09 64.3 109 34.9
Haze_03554 Corylus avellana HOM05D000235 ORTHO05D000147 1.5e-08 63.5 78 44.9
ClCG06G013540 Citrullus lanatus HOM05D000178 ORTHO05D001582 1.9e-08 63.2 105 36.2
RcHm_v2.0_Chr4g0399921 Rosa chinensis HOM05D000040 ORTHO05D004411 2.5e-08 62.8 104 35.6
TWI32G0081 Tripterygium wilfordii HOM05D000040 ORTHO05D004411 2.5e-08 62.8 81 39.5
Lju926C8T4 Lonicera japonica HOM05D000040 ORTHO05D004411 3.3e-08 62.4 106 35.8
Rhsim11G0054700 Rhododendron simsii HOM05D000040 ORTHO05D004411 4.3e-08 62.0 115 35.7
TWI32G0630 Tripterygium wilfordii HOM05D000040 ORTHO05D004411 4.3e-08 62.0 84 36.9
Ciclev10010459m.g Citrus clementina HOM05D000040 ORTHO05D004411 5.6e-08 61.6 82 39.0
Glyma.15G164500 Glycine max HOM05D000040 ORTHO05D004411 5.6e-08 61.6 69 44.9
Rhsim03G0267000 Rhododendron simsii HOM05D000040 ORTHO05D004411 9.5e-08 60.8 77 46.8
Cpa.g.sc95.20 Carica papaya HOM05D000040 ORTHO05D004411 1.2e-07 60.5 104 35.6
Rhsim11G0054000 Rhododendron simsii HOM05D000040 ORTHO05D004411 1.2e-07 60.5 115 36.5
Rhsim03G0266700 Rhododendron simsii HOM05D000040 ORTHO05D004411 3.6e-07 58.9 76 42.1
Ciclev10033845m.g Citrus clementina HOM05D000040 ORTHO05D004411 6.1e-07 58.2 103 33.0
MD16G1251300 Malus domestica HOM05D000040 ORTHO05D004411 6.1e-07 58.2 76 40.8
Atru.chr7.415 Acer truncatum HOM05D000040 ORTHO05D004411 8.0e-07 57.8 111 32.4
Manes.06G032900 Manihot esculenta HOM05D000040 ORTHO05D004411 8.0e-07 57.8 72 43.1
Thecc.09G157400 Theobroma cacao HOM05D000040 ORTHO05D004411 8.0e-07 57.8 76 42.1
TWI32G0816 Tripterygium wilfordii HOM05D000040 ORTHO05D004411 8.0e-07 57.8 108 32.4
Migut.J00806 Erythranthe guttata HOM05D000040 ORTHO05D004411 1.8e-06 56.6 75 40.0
Eucgr.K00305 Eucalyptus grandis HOM05D000040 ORTHO05D004411 1.8e-06 56.6 71 36.6
Sed0014583 Sechium edule HOM05D000040 ORTHO05D004411 1.8e-06 56.6 105 34.3
CSS0034353 Camellia sinensis var. sinensis HOM05D000040 ORTHO05D004411 2.3e-06 56.2 88 36.4
Duzib168G2409 Durio zibethinus HOM05D000040 ORTHO05D004411 2.3e-06 56.2 76 39.5
Glyma.09G058300 Glycine max HOM05D000040 ORTHO05D004411 2.3e-06 56.2 69 40.6
VMungo1309G1254 Vigna mungo HOM05D000040 ORTHO05D004411 4.0e-06 55.5 69 37.7
COL.COLO4_10075 Corchorus olitorius HOM05D000040 ORTHO05D004411 5.2e-06 55.1 80 36.2
Migut.J00807 Erythranthe guttata HOM05D000040 ORTHO05D004411 5.2e-06 55.1 68 44.1
Eucgr.H03635 Eucalyptus grandis HOM05D000040 ORTHO05D004411 5.2e-06 55.1 103 33.0
AL7G22210 Arabidopsis lyrata HOM05D000040 ORTHO05D004411 8.9e-06 54.3 79 35.4
Phvul.009G237100 Phaseolus vulgaris HOM05D000040 ORTHO05D004411 8.9e-06 54.3 69 37.7


User provided reference genes

Program Settings