Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv02210 Davidia involucrata HOM05D007506 ORTHO05D008409 2.3e-25 118.6 87 100.0
Dinv02209 Davidia involucrata HOM05D007506 ORTHO05D008409 2.5e-19 98.6 87 89.7
Dinv07589 Davidia involucrata HOM05D007506 ORTHO05D008409 2.5e-19 98.6 87 89.7
Dinv12843 Davidia involucrata HOM05D007506 ORTHO05D008409 6.8e-17 90.5 87 72.4
Solyc11g006750.1 Solanum lycopersicum HOM05D007506 ORTHO05D008409 1.1e-14 83.2 87 75.9
CSS0050385 Camellia sinensis var. sinensis HOM05D007506 ORTHO05D008409 2.4e-14 82.0 87 78.2
Sopen11g002680 Solanum pennellii HOM05D007506 ORTHO05D008409 1.2e-13 79.7 87 74.7
Hma1.2p1_0756F.1_g213215 Hydrangea macrophylla HOM05D007506 ORTHO05D008409 1.6e-13 79.3 86 74.4
Hma1.2p1_1491F.1_g286710 Hydrangea macrophylla HOM05D007506 ORTHO05D008409 1.6e-13 79.3 86 74.4
Nitab4.5_0002586g0040 Nicotiana tabacum HOM05D007506 ORTHO05D008409 6.0e-13 77.4 55 70.9
Hma1.2p1_0756F.1_g213210 Hydrangea macrophylla HOM05D007506 ORTHO05D008409 7.8e-13 77.0 56 71.4
PGSC0003DMG400023979 Solanum tuberosum HOM05D007506 ORTHO05D008409 1.7e-12 75.9 55 70.9
CAN.G1373.1 Capsicum annuum HOM05D007506 ORTHO05D008409 8.7e-12 73.6 56 67.9
Cc02_g09560 Coffea canephora HOM05D007506 ORTHO05D008409 3.3e-11 71.6 56 69.6
Nitab4.5_0015562g0010 Nicotiana tabacum HOM05D007506 ORTHO05D008409 4.3e-11 71.2 52 71.2
Nitab4.5_0010633g0010 Nicotiana tabacum HOM05D007506 ORTHO05D008409 5.6e-11 70.9 90 68.9
Peaxi162Scf00125g00216 Petunia axillaris HOM05D007506 ORTHO05D008409 5.6e-11 70.9 55 63.6
Peaxi162Scf00519g00621 Petunia axillaris HOM05D007506 ORTHO05D008409 5.6e-11 70.9 87 71.3
CAN.G1417.6 Capsicum annuum HOM05D007506 ORTHO05D008409 1.6e-10 69.3 52 71.2
Migut.F00865 Erythranthe guttata HOM05D007506 ORTHO05D008409 2.1e-10 68.9 55 63.6
Nitab4.5_0005214g0030 Nicotiana tabacum HOM05D007506 ORTHO05D008409 2.8e-10 68.6 90 67.8
SalBow6G2037 Salvia bowleyana HOM05D007506 ORTHO05D008409 4.8e-10 67.8 55 65.5
Nn6g34869 Nelumbo nucifera HOM05D007506 ORTHO05D008409 1.8e-09 65.9 56 69.6
Oeu024806.1 Olea europaea HOM05D007506 ORTHO05D008409 1.8e-09 65.9 54 64.8
Ciclev10017346m.g Citrus clementina HOM05D007506 ORTHO05D008409 3.1e-09 65.1 55 67.3
Oeu027974.1 Olea europaea HOM05D007506 ORTHO05D008409 5.3e-09 64.3 87 71.3
Hund06790 Selenicereus undatus HOM05D007506 ORTHO05D008409 1.5e-08 62.8 57 64.9
PGR142G2547 Punica granatum HOM05D007506 ORTHO05D008409 2.6e-08 62.0 55 65.5
TAR633G2594 Trochodendron aralioides HOM05D007506 ORTHO05D008409 7.6e-08 60.5 55 58.2
vmacro10310 Vaccinium macrocarpon HOM05D007506 ORTHO05D008409 9.9e-08 60.1 55 65.5
PGSC0003DMG400023393 Solanum tuberosum HOM05D007506 ORTHO05D008409 1.3e-07 59.7 58 58.6
Cpa.g.sc54.9 Carica papaya HOM05D007506 ORTHO05D008409 2.2e-07 58.9 55 61.8
Aqoxy7G00782 Aquilegia oxysepala HOM05D007506 ORTHO05D008409 2.9e-07 58.5 55 61.8
MBI17_g08330_MAGBIO Magnolia biondii HOM05D007506 ORTHO05D008409 2.9e-07 58.5 56 58.9
CiPaw.14G033800 Carya illinoinensis HOM05D007506 ORTHO05D008409 3.8e-07 58.2 57 59.6
Haze_03301 Corylus avellana HOM05D007506 ORTHO05D008409 6.4e-07 57.4 57 63.2
Manes.07G086800 Manihot esculenta HOM05D007506 ORTHO05D008409 6.4e-07 57.4 55 60.0
CANSAT56G4328 Cannabis sativa HOM05D007506 ORTHO05D008409 8.4e-07 57.0 56 60.7
CsaV3_6G004310 Cucumis sativus L. HOM05D007506 ORTHO05D008409 1.1e-06 56.6 55 58.2
Solyc05g055250.2 Solanum lycopersicum HOM05D007506 ORTHO05D008409 1.1e-06 56.6 58 55.2
Aqoxy7G00781 Aquilegia oxysepala HOM05D007506 ORTHO05D008409 1.4e-06 56.2 57 59.6
VMungo0720G0153 Vigna mungo HOM05D007506 ORTHO05D008409 1.4e-06 56.2 55 65.5
ClCG08G008330 Citrullus lanatus HOM05D007506 ORTHO05D008409 2.4e-06 55.5 56 58.9
SalBow3G3829 Salvia bowleyana HOM05D007506 ORTHO05D008409 2.4e-06 55.5 42 64.3
Thecc.10G114000 Theobroma cacao HOM05D007506 ORTHO05D008409 2.4e-06 55.5 56 58.9
GSVIVG01010679001 Vitis vinifera HOM05D007506 ORTHO05D008409 2.4e-06 55.5 40 75.0
Glyma.10G277900 Glycine max HOM05D007506 ORTHO05D008409 4.2e-06 54.7 55 63.6
Phvul.007G023500 Phaseolus vulgaris HOM05D007506 ORTHO05D008409 4.2e-06 54.7 55 63.6
SGA_v2.0_scaffold62G21316 Striga asiatica HOM05D007506 ORTHO05D008409 4.2e-06 54.7 51 62.7
Atru.chr12.1049 Acer truncatum HOM05D007506 ORTHO05D008409 5.4e-06 54.3 53 58.5
CDE12G0642 Ceratophyllum demersum HOM05D007506 ORTHO05D008409 5.4e-06 54.3 55 52.7
MELO3C019903.2 Cucumis melo HOM05D007506 ORTHO05D008409 5.4e-06 54.3 56 58.9
Potri.010G240401 Populus trichocarpa HOM05D007506 ORTHO05D008409 7.1e-06 53.9 55 58.2
Sopen05g033690 Solanum pennellii HOM05D007506 ORTHO05D008409 7.1e-06 53.9 56 55.4
Sabra08G0010500 Salix brachista HOM05D007506 ORTHO05D008409 9.3e-06 53.5 57 56.1
THA.LOC104816468 Tarenaya hassleriana HOM05D012863 ORTHO05D008409 9.3e-06 53.5 62 51.6
TAR636G0277 Trochodendron aralioides HOM05D007506 ORTHO05D008409 9.3e-06 53.5 55 56.4


User provided reference genes

Program Settings