Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv02177 Davidia involucrata HOM05D000002 ORTHO05D004433 1.2e-86 323.2 167 100.0
SHI49936 Sapria himalayana HOM05D000002 ORTHO05D000001 8.0e-22 107.8 73 71.2
SHI45609 Sapria himalayana HOM05D000002 ORTHO05D000001 1.4e-21 107.1 73 69.9
TAR610G0003 Trochodendron aralioides HOM05D000002 ORTHO05D000001 2.3e-21 106.3 258 32.6
SHI14609 Sapria himalayana HOM05D000002 ORTHO05D000001 3.0e-21 105.9 73 68.5
SHI44323 Sapria himalayana HOM05D000002 ORTHO05D000001 3.0e-21 105.9 73 68.5
SHI18328 Sapria himalayana HOM05D000002 ORTHO05D000001 1.1e-20 104.0 73 68.5
SHI06746 Sapria himalayana HOM05D000002 ORTHO05D004433 1.5e-20 103.6 70 70.0
SHI38827 Sapria himalayana HOM05D000002 ORTHO05D004433 1.5e-20 103.6 73 67.1
ECA236G5067 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.0e-20 103.2 155 40.6
SHI04168 Sapria himalayana HOM05D000002 ORTHO05D004433 4.4e-20 102.1 73 67.1
MD01G1096700 Malus domestica HOM05D000002 ORTHO05D000001 7.4e-20 101.3 73 67.1
ECA238G3349 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.7e-20 100.9 73 65.8
SHI51732 Sapria himalayana HOM05D000002 ORTHO05D000001 1.3e-19 100.5 65 70.8
ECA233G1874 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.7e-19 100.1 73 64.4
ECA234G3440 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.8e-19 99.4 73 64.4
SHI05549 Sapria himalayana HOM05D000002 ORTHO05D004433 2.8e-19 99.4 73 67.1
ECA240G0479 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.7e-19 99.0 73 60.3
ECA234G1536 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.8e-19 98.6 73 63.0
ECA240G4274 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.8e-19 98.6 73 63.0
ECA238G4301 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.3e-19 98.2 164 38.4
ECA246G2496 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.2e-19 97.8 73 63.0
Oeu012846.1 Olea europaea HOM05D003971 ORTHO05D004433 8.2e-19 97.8 72 63.9
Ah.01g008310 Amaranthus hybridus HOM05D000002 ORTHO05D004433 1.1e-18 97.4 73 61.6
ECA248G0669 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.1e-18 97.4 73 61.6
Ah.13g069620 Amaranthus hybridus HOM05D000002 ORTHO05D004433 1.4e-18 97.1 73 61.6
Oeu035997.1 Olea europaea HOM05D000002 ORTHO05D004433 1.4e-18 97.1 70 64.3
SHI04823 Sapria himalayana HOM05D000002 ORTHO05D004433 1.4e-18 97.1 65 69.2
ECA248G0687 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.8e-18 96.7 73 61.6
SHI21269 Sapria himalayana HOM05D000002 ORTHO05D004433 1.8e-18 96.7 65 67.7
ECA247G3536 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.4e-18 96.3 73 61.6
ECA233G2777 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.1e-18 95.9 73 63.0
ECA248G3794 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.1e-18 95.9 73 60.3
Ah.13g077590 Amaranthus hybridus HOM05D000002 ORTHO05D000001 7.0e-18 94.7 73 60.3
ECA246G3093 Erigeron canadensis HOM05D001467 ORTHO05D001214 1.6e-17 93.6 73 60.3
Oeu003015.1 Olea europaea HOM05D000002 ORTHO05D004433 1.6e-17 93.6 72 59.7
Ah.16g108610 Amaranthus hybridus HOM05D000002 ORTHO05D004433 2.0e-17 93.2 73 58.9
Oeu034209.1 Olea europaea HOM05D000002 ORTHO05D004433 3.5e-17 92.4 70 60.0
ECA233G2147 Erigeron canadensis HOM05D000509 ORTHO05D004433 7.7e-17 91.3 73 57.5
Oeu026048.1 Olea europaea HOM05D000002 ORTHO05D000001 1.0e-16 90.9 67 65.7
ECA246G5102 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.3e-16 90.5 73 58.9
SHI45691 Sapria himalayana HOM05D000002 ORTHO05D004433 2.2e-16 89.7 55 72.7
Nn1g01470 Nelumbo nucifera HOM05D000002 ORTHO05D004433 5.0e-16 88.6 73 56.2
SHI10489 Sapria himalayana HOM05D000002 ORTHO05D004433 5.0e-16 88.6 55 72.7
Oeu050054.1 Olea europaea HOM05D000002 ORTHO05D004433 6.5e-16 88.2 73 58.9
Oeu055579.1 Olea europaea HOM05D000002 ORTHO05D004433 1.9e-15 86.7 70 60.0
Oeu022773.1 Olea europaea HOM05D000002 ORTHO05D004433 4.2e-15 85.5 70 58.6
Oeu033717.1 Olea europaea HOM05D000002 ORTHO05D004433 5.5e-15 85.1 73 54.8
Dinv02026 Davidia involucrata HOM05D028709 ORTHO05D004433 7.2e-15 84.7 47 83.0
PGSC0003DMG400023646 Solanum tuberosum HOM05D000002 ORTHO05D004433 1.6e-14 83.6 72 55.6
Ah.04g159010 Amaranthus hybridus HOM05D000002 ORTHO05D004433 2.1e-14 83.2 59 64.4
Oeu001115.1 Olea europaea HOM05D000002 ORTHO05D004433 2.1e-14 83.2 59 66.1
SHI32919 Sapria himalayana HOM05D000002 ORTHO05D004433 6.1e-14 81.6 52 71.2
Nn4g23986 Nelumbo nucifera HOM05D000002 ORTHO05D000001 1.0e-13 80.9 73 49.3
Sopen12g018200 Solanum pennellii HOM05D000014 ORTHO05D004433 3.0e-13 79.3 73 49.3
Nn5g27722 Nelumbo nucifera HOM05D000002 ORTHO05D004433 5.2e-13 78.6 68 50.0
Nn8g40101 Nelumbo nucifera HOM05D000002 ORTHO05D004433 5.2e-13 78.6 134 36.6
Sopen09g028980 Solanum pennellii HOM05D000002 ORTHO05D004433 6.7e-13 78.2 70 48.6
PSO675G3339 Papaver somniferum HOM05D000002 ORTHO05D004433 8.8e-13 77.8 73 50.7
Nn8g39416 Nelumbo nucifera HOM05D000002 ORTHO05D000001 1.2e-12 77.4 73 47.9
Sopen05g027370 Solanum pennellii HOM05D000002 ORTHO05D004433 1.2e-12 77.4 56 66.1
Ah.16g106880 Amaranthus hybridus HOM05D000002 ORTHO05D004433 2.0e-12 76.6 57 59.6
Nn1g02545 Nelumbo nucifera HOM05D000002 ORTHO05D004433 2.0e-12 76.6 73 46.6
ECA233G2071 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.6e-12 76.3 51 66.7
Nn1g09492 Nelumbo nucifera HOM05D000002 ORTHO05D004433 3.3e-12 75.9 78 43.6
SHI43060 Sapria himalayana HOM05D000002 ORTHO05D004433 4.4e-12 75.5 50 68.0
SHI09919 Sapria himalayana HOM05D000002 ORTHO05D004433 7.5e-12 74.7 50 70.0
ECA238G4719 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.7e-12 74.3 59 55.9
CSS0046925 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D004433 1.3e-11 73.9 56 58.9
SHI32313 Sapria himalayana HOM05D000002 ORTHO05D004433 2.2e-11 73.2 47 68.1
Sopen12g018110 Solanum pennellii HOM05D000004 ORTHO05D000002 2.2e-11 73.2 67 47.8
SHI17056 Sapria himalayana HOM05D000105 ORTHO05D004433 3.7e-11 72.4 60 55.0
Sopen09g027930 Solanum pennellii HOM05D000002 ORTHO05D004433 3.7e-11 72.4 73 43.8
Nn5g30038 Nelumbo nucifera HOM05D000002 ORTHO05D004433 6.3e-11 71.6 73 43.8
SHI12756 Sapria himalayana HOM05D000002 ORTHO05D004433 6.3e-11 71.6 73 54.8
SHI16256 Sapria himalayana HOM05D000002 ORTHO05D004433 6.3e-11 71.6 73 54.8
SHI03826 Sapria himalayana HOM05D000002 ORTHO05D004433 8.2e-11 71.2 56 57.1
ECA234G3041 Erigeron canadensis HOM05D001549 ORTHO05D003098 1.4e-10 70.5 51 64.7
Ah.03g145180 Amaranthus hybridus HOM05D000002 ORTHO05D004433 2.4e-10 69.7 54 61.1
MD01G1222200 Malus domestica HOM05D000002 ORTHO05D004433 4.1e-10 68.9 61 54.1
Gohir.D10G094150 Gossypium hirsutum HOM05D000002 ORTHO05D004433 9.1e-10 67.8 55 56.4
Gohir.D08G274150 Gossypium hirsutum HOM05D000002 ORTHO05D004433 2.0e-09 66.6 62 51.6
Gorai.004G292700 Gossypium raimondii HOM05D000002 ORTHO05D004433 2.0e-09 66.6 62 51.6
SHI07649 Sapria himalayana HOM05D000002 ORTHO05D004433 2.7e-09 66.2 73 50.7
Sopen00g007880 Solanum pennellii HOM05D000002 ORTHO05D004433 2.7e-09 66.2 54 57.4
Sopen03g008290 Solanum pennellii HOM05D000002 ORTHO05D004433 7.7e-09 64.7 72 41.7
Dinv32692 Davidia involucrata HOM05D017093 ORTHO05D004433 2.2e-08 63.2 56 53.6
Nn8g40511 Nelumbo nucifera HOM05D000002 ORTHO05D000001 2.2e-08 63.2 59 45.8
ECA240G3347 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.9e-08 62.8 51 56.9
Nn2g13681 Nelumbo nucifera HOM05D000002 ORTHO05D004433 5.0e-08 62.0 41 68.3
Sopen03g007650 Solanum pennellii HOM05D000002 ORTHO05D004433 5.0e-08 62.0 68 42.6
ECA246G0537 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.5e-08 61.6 46 58.7
MD14G1034300 Malus domestica HOM05D000038 ORTHO05D004433 1.1e-07 60.8 41 63.4
ECA247G2369 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.5e-07 60.5 50 54.0
RcHm_v2.0_Chr3g0481931 Rosa chinensis HOM05D000002 ORTHO05D000001 1.5e-07 60.5 69 43.5
Cc04_g10140 Coffea canephora HOM05D000002 ORTHO05D004433 2.5e-07 59.7 70 40.0
Dinv32123 Davidia involucrata HOM05D003151 ORTHO05D003723 2.5e-07 59.7 44 68.2
Dinv13270 Davidia involucrata HOM05D002148 ORTHO05D013593 3.2e-07 59.3 74 43.2
FvH4_5g31431 Fragaria vesca HOM05D000002 ORTHO05D004433 3.2e-07 59.3 69 42.0
Nn1g03239 Nelumbo nucifera HOM05D000002 ORTHO05D004433 4.2e-07 58.9 70 42.9
Nn2g15808 Nelumbo nucifera HOM05D000006 ORTHO05D004433 4.2e-07 58.9 76 38.2
QL05p063530 Quercus lobata HOM05D000002 ORTHO05D004433 7.2e-07 58.2 44 54.5
Sopen03g027090 Solanum pennellii HOM05D000002 ORTHO05D002065 7.2e-07 58.2 85 38.8
Thhalv10019725m.g Eutrema salsugineum HOM05D000002 ORTHO05D004433 9.4e-07 57.8 85 36.5
SHI10542 Sapria himalayana HOM05D000002 ORTHO05D004433 9.4e-07 57.8 47 53.2
SHI47859 Sapria himalayana HOM05D000002 ORTHO05D004433 9.4e-07 57.8 41 68.3
BolC8t49584H Brassica oleracea HOM05D000002 ORTHO05D004433 1.6e-06 57.0 75 34.7
CAN.G401.9 Capsicum annuum HOM05D000002 ORTHO05D004433 1.6e-06 57.0 39 64.1
CSS0046023 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D004433 2.7e-06 56.2 122 36.1
ECA246G4710 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.7e-06 56.2 39 69.2
Sopen09g011970 Solanum pennellii HOM05D008571 ORTHO05D011280 3.6e-06 55.8 57 47.4
CSS0021348 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D004433 4.7e-06 55.5 39 69.2
Cc05_g05430 Coffea canephora HOM05D000002 ORTHO05D004433 8.0e-06 54.7 86 34.9


User provided reference genes

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